FC868674

Overview
NameFC868674
Unique NameFC868674
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5123 contig Ccv1_Contig5123:1..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868674 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.565e-38
Identity = 88/150 (58.67%), Postives = 102/150 (68.00%), Query Frame = 3
Query:  240 DLFGSVRRSIVLCTTAESTNDSQTANSPTPFSGGNLVERFNSCIRNSRVLSKHISP----SVKMSPPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESXNI 677
            DLFGSVRRS+V  +T   T+D    N P PF    L ++  SCIR S V +K  SP    +V++ PPIRWRKG+LIG GAFG+VYMGMNLDSGELLAVKQVLI +N ASKEK Q HI             SHPNIVRYLG VRE+E+ NI
Sbjct:    3 DLFGSVRRSLVFRST---TDDENQENHPPPFPS-LLADKITSCIRKSMVFAKSQSPPNNSTVQIKPPIRWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDETLNI 148          
BLAST of FC868674 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.151e-36
Identity = 88/152 (57.89%), Postives = 102/152 (67.11%), Query Frame = 3
Query:  240 DLFGSVRRSIVLCTTAESTNDSQTANSPTPFSGGNLVERFNSCIRNSRVLSK-HISP-----SVKMSPPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESXNI 677
            D FGSVRRS+V      S++D    N P PF G  L ++  SCIR S++  K   SP     +V M+PPI WRKG+LIG GAFG+VYMGMNLDSGELLAVKQVLIAANFASKEK Q HI             SHPNIVRYLG VRE+++ NI
Sbjct:    3 DFFGSVRRSLVF---RPSSDDDNQENQP-PFPGV-LADKITSCIRKSKIFIKPSFSPPPPANTVDMAPPISWRKGQLIGRGAFGTVYMGMNLDSGELLAVKQVLIAANFASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDDTLNI 149          
BLAST of FC868674 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.021e-31
Identity = 82/155 (52.90%), Postives = 97/155 (62.58%), Query Frame = 3
Query:  240 DLFGSVRRSIVLCTTAESTNDSQTANSPTPFSGGNL---VERFNSCIRNSRV--LSKHI----SPSVKMSPPIRWRKGELIGCGAFGSVYMGMNLDSGELLAVKQVLIAANFASKEKVQDHIXXXXXXXXXXXXXSHPNIVRYLGMVREEESXNI 677
            D+ GSVRRS+V  ++    + +         SGG L   V + NS IR+SR+   SK      +P  + +P IRWRKGELIGCGAFG VYMGMNLDSGELLA+KQVLIA + ASKEK Q HI             SHPNIVRYLG VRE +S NI
Sbjct:    3 DILGSVRRSLVFRSSLAGDDGT---------SGGGLSGFVGKINSSIRSSRIGLFSKPPPGLPAPRKEEAPSIRWRKGELIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNIVRYLGTVRESDSLNI 148          
The following BLAST results are available for this feature:
BLAST of FC868674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
M3K2_ARATH7.565e-3858.67Mitogen-activated protein kinase kinase kinase 2 O... [more]
ANP1_ARATH4.151e-3657.89Mitogen-activated protein kinase kinase kinase ANP... [more]
M3K3_ARATH4.021e-3152.90Mitogen-activated protein kinase kinase kinase 3 O... [more]
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Properties
Property NameValue
Genbank descriptionC31003D03EF AbioticL1 Citrus clementina cDNA clone C31003D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868674 ID=FC868674; Name=FC868674; organism=Citrus clementina; type=EST; length=679bp
GACTGTATAGTCTGTACTTAATAACTCCGGCCCACTAAAAATTCAGTGTT
TAAAAAATCTGTGTCATGGTGCAGTGCACCTCTCTCTCCCTCTTCTCTCC
CGTGTGTGCACAGTAACTTTTTGAGGATAGCCGATTCTTGAGCTGAAGCA
AAGGAAACGGAATTCAGCTAGATCAGAGTAGCAGCAACTCTGTTAAAGCT
TCATAACAAGCTTCCAAGTTTGGATTCATGGGAGATCATGATCTCTTCGG
CTCAGTGCGCCGATCAATTGTATTATGTACGACGGCGGAGTCCACCAACG
ACTCACAAACGGCAAACTCACCGACGCCTTTTTCCGGAGGAAATTTGGTG
GAAAGGTTCAATTCTTGCATCCGCAATTCTCGAGTTTTAAGCAAACACAT
TTCGCCGTCGGTAAAAATGTCGCCGCCGATCCGATGGCGGAAGGGCGAGT
TGATCGGTTGTGGGGCTTTTGGAAGTGTGTATATGGGAATGAATCTTGAT
TCCGGCGAGCTTTTAGCGGTGAAGCAGGTCTTAATTGCGGCAAATTTTGC
TTCAAAGGAAAAAGTGCAGGATCACATCAAGGAGCTTGAGGAAGAATTTA
AGCTTCTAAAAGATCTCTCTCATCCAAACATTGTTAGATACTTGGGGATG
GTTAGGGAGGAGGAATCATTNAATATTCT
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