FC868680

Overview
NameFC868680
Unique NameFC868680
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB3_ARATH (Putative dihydrodipicolinate reductase 3, chloroplastic OS=Arabidopsis thaliana GN=DAPB3 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.503e-74
Identity = 143/188 (76.06%), Postives = 163/188 (86.70%), Query Frame = 2
Query:   26 CRMHHISQNVKAKR-FISCSTNPP-QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNA 583
            C    +S+++K  R   SCS + P Q+NIKVIINGA KEIGRAAV+AVTKARGME+AGA+D+H VGEDIG++CDME+PLEIPV+SDLTMVLGSISQ K   VVIDFTD STVY+NVKQATAFGM+SVVYVP I+ ETVSALSA CDKA+MGCL+APTLSIGSILLQQA I ASFHY NVE+VESRPNA
Sbjct:    6 CHFFQLSRHLKPSRPSFSCSASQPSQNNIKVIINGAAKEIGRAAVVAVTKARGMELAGAVDNHFVGEDIGLLCDMEEPLEIPVVSDLTMVLGSISQGKEVGVVIDFTDPSTVYENVKQATAFGMKSVVYVPRIKPETVSALSALCDKATMGCLVAPTLSIGSILLQQAVIMASFHYNNVELVESRPNA 193          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_CYAP4 (Dihydrodipicolinate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dapB PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.171e-31
Identity = 74/166 (44.58%), Postives = 107/166 (64.46%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 586
            Q  I VI+NGA  ++GR  V AV +A  + + GA+D +    G+DIG V  +  PLE+P+++DL  +L + +Q     V++DFT  ++VYDNV+ A A+G+R VV    +  E +  L+ F DKASMGCLI P  SIG +LLQQAAI AS ++ +VEI+E   N +
Sbjct:    4 QGAIPVIVNGAAGKMGREVVKAVAQAADLTLFGAVDRNPSLQGQDIGEVVGIG-PLEVPLLADLQSLLVAAAQEPQAGVMVDFTHPNSVYDNVRMAIAYGVRPVVGTTGLSPEQIRDLATFADKASMGCLIIPNFSIGMVLLQQAAIQASQYFDHVEIIELHHNQK 168          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_SYNY3 (Dihydrodipicolinate reductase OS=Synechocystis sp. (strain PCC 6803) GN=dapB PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 82/218 (37.61%), Postives = 124/218 (56.88%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRHIYLYPKFQNKHSFHTKRKLKIASSIIGVGEILILS 742
            Q  I V++NGA  ++GR  + AV +A  +++ GA+D +    G+DIG V  +  PLE+PV++DL  VL   +Q K + V++DFT  S VYDNV+ A A+G+R VV    +  + +  L  F +KAS GCLIAP  +IG +L+QQAA+ A  ++ +VEI+E   N +    + T I     L  +    K  N  +   K  +  A   +G G+I I S
Sbjct:    4 QDLIPVVVNGAAGKMGREVIKAVAQAPDLQLVGAVDHNPSLQGQDIGEVVGIA-PLEVPVLADLQSVLVLATQEKIQGVMVDFTHPSGVYDNVRSAIAYGVRPVVGTTGLSEQQIQDLGDFAEKASTGCLIAPNFAIGVLLMQQAAVQACQYFDHVEIIELHHNQKADAPSGTAIKTAQMLAEM---GKTFNPPAVEEKETIAGAKGGLGPGQIPIHS 217          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_CYAP7 (Dihydrodipicolinate reductase OS=Cyanothece sp. (strain PCC 7424) GN=dapB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.180e-29
Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613
            +S I V++NGA  ++G+  + AV++A  M + GA+D +    GED G V     P+E+P++ DL  VL   +Q K + V++DFT    VYDN++ A A+G+R VV    +  E +  L  F +KAS GCLI P  SIG ILLQQAA+ AS ++ +VEI+E   N +    + T I
Sbjct:    4 ESPIPVVVNGAAGKMGKEVIKAVSQAEDMMLVGAVDLNPKYRGEDAGEVAGCG-PVEVPILDDLQSVLVLATQEKVQGVMVDFTHPDGVYDNIRSAIAYGVRPVVGTTGLSGEQIKDLGEFAEKASTGCLIVPNFSIGMILLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAI 177          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_NOSP7 (Dihydrodipicolinate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=dapB PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.013e-29
Identity = 72/178 (40.45%), Postives = 110/178 (61.80%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV---GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR--AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613
            Q+ I VI+NGA  ++GR  + AV +A  + + GAID HS+    +D G +  + +PLE+P+ + L  +LG ++  +     V++DFT   +VYDN++ A A+G+R VV    +  E +  L+ F DKAS GCLI P  SIG +LLQQAAI+AS ++ +VEI+E   N +    + T I
Sbjct:    4 QAPIPVIVNGAAGKMGREVIKAVAQAPDLNLVGAID-HSLEHQDKDAGELAGLSEPLEVPITNQLEPMLGYVAGDRQSPPGVIVDFTHPDSVYDNIRSAIAYGIRPVVGTTGLSPEQIQDLADFADKASTGCLIIPNFSIGMVLLQQAAIAASKYFDHVEIIELHHNQKADAPSGTAI 180          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_ANASP (Dihydrodipicolinate reductase OS=Anabaena sp. (strain PCC 7120) GN=dapB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 71/177 (40.11%), Postives = 108/177 (61.02%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR--AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613
            Q+ I VI+NGA  ++GR  V AV +A  + + GAIDS     G+D G +  + +PLE+P+ + L  +LG ++  +     V++DFT   +VYDNV+ A A+G+R VV    +    +  L+ F +KAS GCLI P  SIG +LLQQAA++AS ++ +VEI+E   N +    + T I
Sbjct:    4 QAPIPVIVNGAAGKMGREVVKAVAQAPDLNLLGAIDSSPEHQGKDAGELAGLSEPLEVPITNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTGLSPAQIQNLADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADAPSGTAI 180          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_ANAVT (Dihydrodipicolinate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dapB PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.856e-29
Identity = 70/177 (39.55%), Postives = 108/177 (61.02%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR--AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613
            Q+ I VI+NGA  ++GR  V A+ +A  + + GAIDS     G+D G +  + +PLE+P+ + L  +LG ++  +     V++DFT   +VYDNV+ A A+G+R VV    +    +  L+ F +KAS GCLI P  SIG +LLQQAA++AS ++ +VEI+E   N +    + T I
Sbjct:    4 QAPIPVIVNGAAGKMGREVVKAIAQAPDLNLLGAIDSSPEHQGKDAGELAGLSEPLEVPITNQLEPMLGYVAGERQGPPGVIVDFTHPDSVYDNVRSAIAYGIRPVVGTTGLSPAQIQNLADFAEKASTGCLIIPNFSIGMVLLQQAAVTASQYFDHVEIIELHHNQKADAPSGTAI 180          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_CYAP8 (Dihydrodipicolinate reductase OS=Cyanothece sp. (strain PCC 8801) GN=dapB PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.305e-28
Identity = 71/174 (40.80%), Postives = 106/174 (60.92%), Query Frame = 2
Query:   98 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613
            S I V++NGA  ++GR  V AV +A  M + GA+D +    G+D+G V      LE+P++ DL  +L   +Q K + V++DFT   +VY+NV+ A A+G+R VV    +  E +  L+ F DKAS GCL+ P  SIG +LLQQAA+ AS ++ +VEI+E   N +    + T I
Sbjct:    5 SLIPVVVNGAAGKMGREVVKAVAQAEDMMLVGAVDYNPNYRGQDVGEVAGCGA-LEVPIVDDLQSILVLATQEKIQGVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLTEEQLKDLADFADKASTGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQKADAPSGTAI 177          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_TRIEI (Dihydrodipicolinate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=dapB PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.704e-28
Identity = 71/175 (40.57%), Postives = 107/175 (61.14%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613
            Q++  VI+ GA  ++GR  +  V  A  M + GAI+     +G+DIG +     PLE+P+++DL  +L   +Q K  AV++DFT   +VY+NV+ A A+G+R VV    +  E +  L+ F +KAS+G LI P  SIG +LLQQAAI+AS H+ +VEI+E   N +    + T I
Sbjct:    4 QTSTPVIVCGAAGKMGREVIKTVANASDMTLLGAIECQPEYIGQDIGELIG-SGPLEVPILNDLQGILVMAAQEKQPAVMVDFTHPDSVYENVRSAIAYGVRPVVGTTGLSQEQIQDLAEFAEKASIGTLIIPNFSIGMVLLQQAAIAASKHFDHVEIIELHHNQKADAPSGTAI 177          
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_MASLA (Dihydrodipicolinate reductase OS=Mastigocladus laminosus GN=dapB PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.225e-28
Identity = 69/177 (38.98%), Postives = 106/177 (59.89%), Query Frame = 2
Query:   95 QSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSK--ARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613
            Q+ I VI+NGA  ++GR  + AV +A  M + GA+D++    G+D G V  + +P E+P+   L  +L  ++  +     V++DFT    VYDNV+ A A+G+R VV    +  + +  L+ F +KAS GCLI P  SIG +LLQQAAI+AS ++ +VEI+E   N +    + T I
Sbjct:    4 QTPIPVIVNGAAGKMGRETIKAVVQAADMTLMGAVDTNPEYQGKDAGEVAGLNEPTEVPITDQLEPILAYVAGERHLQPGVMVDFTHPDAVYDNVRSAIAYGIRPVVGTTGLSSKQIEQLADFAEKASTGCLIIPNFSIGMVLLQQAAIAASQYFDHVEIIELHHNQKADAPSGTAI 180          
The following BLAST results are available for this feature:
BLAST of FC868680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
DAPB3_ARATH3.503e-7476.06Putative dihydrodipicolinate reductase 3, chloropl... [more]
DAPB_CYAP48.171e-3144.58Dihydrodipicolinate reductase OS=Cyanothece sp. (s... [more]
DAPB_SYNY31.820e-3037.61Dihydrodipicolinate reductase OS=Synechocystis sp.... [more]
DAPB_CYAP71.180e-2941.14Dihydrodipicolinate reductase OS=Cyanothece sp. (s... [more]
DAPB_NOSP72.013e-2940.45Dihydrodipicolinate reductase OS=Nostoc punctiform... [more]
DAPB_ANASP4.484e-2940.11Dihydrodipicolinate reductase OS=Anabaena sp. (str... [more]
DAPB_ANAVT5.856e-2939.55Dihydrodipicolinate reductase OS=Anabaena variabil... [more]
DAPB_CYAP81.305e-2840.80Dihydrodipicolinate reductase OS=Cyanothece sp. (s... [more]
DAPB_TRIEI1.704e-2840.57Dihydrodipicolinate reductase OS=Trichodesmium ery... [more]
DAPB_MASLA2.225e-2838.98Dihydrodipicolinate reductase OS=Mastigocladus lam... [more]

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Properties
Property NameValue
Genbank descriptionC31003D09EF AbioticL1 Citrus clementina cDNA clone C31003D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868680 ID=FC868680; Name=FC868680; organism=Citrus clementina; type=EST; length=745bp
GGCAACTTTGGGCTGCCAATTTCCCTGCAGAATGCATCACATTTCTCAAA
ATGTTAAAGCCAAGCGTTTCATTTCTTGCTCAACGAATCCCCCACAAAGT
AATATTAAGGTTATTATAAATGGAGCAGTGAAAGAAATAGGACGAGCAGC
AGTAATTGCCGTCACGAAAGCCAGAGGGATGGAGGTTGCTGGCGCCATCG
ATTCCCATTCTGTAGGAGAAGATATTGGAATGGTGTGTGATATGGAGCAG
CCTCTGGAAATTCCTGTAATGAGTGACCTCACAATGGTATTAGGTTCCAT
ATCTCAGTCAAAAGCAAGAGCAGTCGTCATTGATTTCACAGATGCTTCAA
CAGTTTATGACAATGTGAAACAGGCAACAGCGTTTGGAATGAGAAGCGTG
GTTTACGTGCCACACATTCAGCTGGAGACAGTTTCAGCATTATCTGCATT
CTGTGACAAGGCCAGCATGGGATGTCTTATTGCACCAACTCTCTCAATAG
GATCTATTCTTCTCCAGCAAGCCGCCATTTCTGCCTCCTTCCACTACAAG
AATGTGGAAATTGTAGAATCAAGGCCAAATGCAAGAGTAAGATATATGAC
TAGAACTTTAATTTCCATGCAGGTCTGTCTGAGGCACATTTACTTATATC
CAAAGTTCCAAAATAAACATAGTTTCCACACTAAGAGAAAACTAAAGATT
GCCAGTAGCATTATCGGCGTGGGTGAGATATTAATTTTAAGTAAA
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