FC868681

Overview
NameFC868681
Unique NameFC868681
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13269 contig Ccv1_Contig13269:559..1273. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: CBAA1_MOUSE (Calcium-binding atopy-related autoantigen 1 OS=Mus musculus GN=Cbara1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.943e-28
Identity = 77/212 (36.32%), Postives = 116/212 (54.72%), Query Frame = 3
Query:    9 EKVFESFASLR----SPEGELLMRPADLMRAIVPVFPPSESHLVRDGYL----RGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVA 620
            +K+F  FA+L+      E E+ M P D +R+I P     E HL  D Y+     G++   E      E  + + +   GLISF +YIF  T+LS P+ +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D    G IS   F   ++A
Sbjct:  127 DKIFRYFATLKVINEPGETEVFMTPQDFVRSITPNEKQPE-HLGLDQYIIKRFDGKKIAQEREKFADEGSIFYSLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD-PVDGRISERQFGGMLLA 335          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: CBAA1_RAT (Calcium-binding atopy-related autoantigen 1 OS=Rattus norvegicus GN=Cbara1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.762e-28
Identity = 77/212 (36.32%), Postives = 116/212 (54.72%), Query Frame = 3
Query:    9 EKVFESFASLR----SPEGELLMRPADLMRAIVPVFPPSESHLVRDGYL----RGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVA 620
            +K+F  FA+L+      E E+ M P D +R+I P     E HL  D Y+     G++   E      E  + + +   GLISF +YIF  T+LS P+ +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D    G IS   F   ++A
Sbjct:  127 DKIFRYFATLKVINEPGETEVFMTPQDFVRSITPNEKQPE-HLGLDQYIIKRFDGKKIAQEREKFADEGSIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD-PVDGRISERQFGGMLLA 335          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: CBAA1_MACFA (Calcium-binding atopy-related autoantigen 1 OS=Macaca fascicularis GN=CBARA1 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.014e-27
Identity = 72/194 (37.11%), Postives = 109/194 (56.19%), Query Frame = 3
Query:    9 EKVFESFASLR----SPEGELLMRPADLMRAIVPVFPPSESHLVRDGYL----RGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYD 566
            +K+F  FA+L+      E E+ M P D +R+I P     E HL  D Y+     G++   E      E  + + +   GLISF +YIF  T+LS P+ +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D
Sbjct:  125 DKIFRYFATLKVINEPGEAEVFMTPEDFVRSITPNEKQPE-HLGLDQYIIKRFDGKKISQEREKFADEGSIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD 316          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: CBAA1_HUMAN (Calcium-binding atopy-related autoantigen 1 OS=Homo sapiens GN=CBARA1 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.014e-27
Identity = 72/194 (37.11%), Postives = 109/194 (56.19%), Query Frame = 3
Query:    9 EKVFESFASLR----SPEGELLMRPADLMRAIVPVFPPSESHLVRDGYL----RGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYD 566
            +K+F  FA+L+      E E+ M P D +R+I P     E HL  D Y+     G++   E      E  + + +   GLISF +YIF  T+LS P+ +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D
Sbjct:  125 DKIFRYFATLKVISEPGEAEVFMTPEDFVRSITPNEKQPE-HLGLDQYIIKRFDGKKISQEREKFADEGSIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRPTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD 316          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: CBAA1_BOVIN (Calcium-binding atopy-related autoantigen 1 OS=Bos taurus GN=CBARA1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.324e-27
Identity = 72/194 (37.11%), Postives = 108/194 (55.67%), Query Frame = 3
Query:    9 EKVFESFASLR----SPEGELLMRPADLMRAIVPVFPPSESHLVRDGY----LRGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYD 566
            +K+F  FA+L+      E E+ M P D +R+I P     E HL  D Y      G++   E      E  + + +   GLISF +YIF  T+LS P+ +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K  +    L  YFFG D + +L  + F++F R L  ++L+LEF  +D
Sbjct:  127 DKIFRYFATLKVISEHGESEVFMTPQDFVRSITPNEKQPE-HLGLDQYTIKRFDGKKIAQEREKFADEGSIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDMEEFEQVQSIIRSQTSMGMRHRDRSTTGNTLKSGL-CSALTTYFFGADLKGKLTIKNFLEFQRKLQHDVLKLEFERHD 318          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: CBAA1_DANRE (Calcium-binding atopy-related autoantigen 1 OS=Danio rerio GN=cbara1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.761e-25
Identity = 72/215 (33.49%), Postives = 115/215 (53.49%), Query Frame = 3
Query:    9 EKVFESFASLR----SPEGELLMRPADLMRAIVPVFPPSES-----HLVR--DGYLRGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFALSMVA 620
            +K+F  FA+L+      + E+ M P D +R+I P     E+      +V+  DG    ++   +      E  + + +   GLISF +YIF  T+LS P+ +F +AFKMFD++ +GE+  EEF+QV +++RS    G  HRD   TG  +K    +  L  YFFG D + +L    F++F R L  ++L+LEF   D    G I+ + F   ++A
Sbjct:  132 DKIFRYFATLKIINEHGDAEVYMTPQDFVRSITPNEKQPENLGLDQFMVKRYDGKDFWQKISQDREKFADEDSIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGDGEVDLEEFEQVQSIIRSQTSMGMRHRDRSTTGNTLKTGGCSSALTTYFFGADLKGKLTISSFLEFQRKLQHDVLKLEFERND-PVDGRITEKQFGGMLLA 345          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: CMC_DICDI (Calcium-binding mitochondrial carrier protein OS=Dictyostelium discoideum GN=mcfO PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.518e-15
Identity = 61/201 (30.35%), Postives = 96/201 (47.76%), Query Frame = 3
Query:   12 KVFESFASLRSPEGELLMRPADLMRAIVPVFPPSESHLVRDGYLRGERRPGELRCAPSEFFMLF---DMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFA 605
            + FE +AS  + EGE  M   D + A+  +    +S         GE    +      +F +LF   D+++ G ISF EY+ F  L++ PE+ + +AFK+FD D NG ISK +FK V+      +    F  +                LV  +FG DGR  L + +F Q +++L +E ++ EF  +D    G I  + FA
Sbjct:   88 QTFEKYAST-TLEGERQMTAEDFLSALTTLESDKQS---------GEHEILKASLDADKFKVLFQMADVDHTGYISFDEYVMFDELMAKPEAEYFLAFKLFDRDGNGYISKNDFKHVITASLDPSIPFNFDCE----------------LVNLYFG-DGRTELNYSQFTQLLKDLQQERIKQEFKFHDKYNSGYIPRDKFA 261          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: EFHA1_HUMAN (EF-hand domain-containing family member A1 OS=Homo sapiens GN=EFHA1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 65/204 (31.86%), Postives = 102/204 (50.00%), Query Frame = 3
Query:   18 FESFASLRSPEGELLMRPADLMRAIVPVFPPSESHLVR------DGYLRGERRPGELRCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHN--RQGAFHRDGLRTGLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFA 605
            F  F+SL   EGE  M P D + +++      ++ + +      +  L G +  G      S FF   D+ + GLIS+ EY+F +T+L+ P S F VAFKM D D N  I K EF ++  ++   +       +  G +  + VK P  N  L   FFG+ G+ +L +++F +FM NL  E+  +EF  +  K    +  EDFA
Sbjct:   90 FMQFSSLEH-EGEYYMTPRDFLFSVMFEQMERKTSVKKLTKKDIEDTLSGIQTAG----CGSTFFR--DLGDKGLISYTEYLFLLTILTKPHSGFHVAFKMLDTDGNEMIEKREFFKLQKIISKQDDLMTVKTNETGYQEAI-VKEPEINTTLQMRFFGKRGQRKLHYKEFRRFMENLQTEIQEMEFLQFS-KGLSFMRKEDFA 284          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: EFHA1_MOUSE (EF-hand domain-containing family member A1 OS=Mus musculus GN=Efha1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 54/154 (35.06%), Postives = 81/154 (52.60%), Query Frame = 3
Query:  171 RCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRT---------GLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFA 605
            RC  S FF   D+ + G+IS+ EY+F +T+L+ P S F VAFKM D+D N  I ++EF ++  ++          +DG +T            VK P  N  L   FFG+ G  +L +++F +FM NL  E+  +EF  +  K    +  EDFA
Sbjct:  140 RCG-STFFR--DLGDKGVISYTEYLFLLTILTKPHSGFHVAFKMLDVDGNEMIERKEFVKLQKIISK--------QDGFKTVKTNETEYQDPTVKEPGVNTTLQVRFFGKRGEKKLHYKEFRRFMENLQTEVQEMEFLQFS-KGLNFMRKEDFA 281          
BLAST of FC868681 vs. ExPASy Swiss-Prot
Match: EFHA1_RAT (EF-hand domain-containing family member A1 OS=Rattus norvegicus GN=Efha1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.841e-15
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 3
Query:  171 RCAPSEFFMLFDMNNDGLISFKEYIFFVTLLSIPESSFSVAFKMFDIDNNGEISKEEFKQVMALMRSHNRQGAFHRDGLRT---------GLNVKGPVENGGLVEYFFGEDGRARLQHEKFVQFMRNLYEEMLRLEFAHYDYKQRGTISAEDFA 605
            RC  S FF   D+ + G+IS+ EY+F +T+L+ P S F VAFKM D+D N  I ++EF ++  ++          +DG +T            VK P  N  L   FFG+ G  +L +++F +F+ NL  E+  +EF  +  K    +  EDFA
Sbjct:  140 RCG-STFFR--DLGDKGVISYTEYLFLLTILTKPHSGFHVAFKMLDVDGNEMIERKEFVRLQKIISK--------QDGFKTVKTNETEYQDPTVKEPGVNTTLQVRFFGKRGEKKLHYKEFRRFVENLQTEVQEMEFLQFS-KGLNFMRKEDFA 281          
The following BLAST results are available for this feature:
BLAST of FC868681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
CBAA1_MOUSE5.943e-2836.32Calcium-binding atopy-related autoantigen 1 OS=Mus... [more]
CBAA1_RAT7.762e-2836.32Calcium-binding atopy-related autoantigen 1 OS=Rat... [more]
CBAA1_MACFA1.014e-2737.11Calcium-binding atopy-related autoantigen 1 OS=Mac... [more]
CBAA1_HUMAN1.014e-2737.11Calcium-binding atopy-related autoantigen 1 OS=Hom... [more]
CBAA1_BOVIN1.324e-2737.11Calcium-binding atopy-related autoantigen 1 OS=Bos... [more]
CBAA1_DANRE2.761e-2533.49Calcium-binding atopy-related autoantigen 1 OS=Dan... [more]
CMC_DICDI1.518e-1530.35Calcium-binding mitochondrial carrier protein OS=D... [more]
EFHA1_HUMAN1.983e-1531.86EF-hand domain-containing family member A1 OS=Homo... [more]
EFHA1_MOUSE3.382e-1535.06EF-hand domain-containing family member A1 OS=Mus ... [more]
EFHA1_RAT9.841e-1534.42EF-hand domain-containing family member A1 OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionC31003D10EF AbioticL1 Citrus clementina cDNA clone C31003D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868681 ID=FC868681; Name=FC868681; organism=Citrus clementina; type=EST; length=714bp
GGCGAGCTGAGAAGGTGTTTGAGTCCTTTGCGTCTTTACGATCACCGGAA
GGAGAATTGCTCATGAGACCAGCAGATTTGATGCGAGCCATCGTTCCTGT
ATTTCCTCCCTCTGAATCACACCTTGTCAGAGATGGATATTTGAGAGGGG
AAAGGAGGCCTGGGGAGTTAAGATGTGCTCCTTCAGAATTTTTTATGCTC
TTTGATATGAACAATGATGGATTGATATCTTTCAAAGAATATATCTTTTT
TGTAACTCTACTCAGCATTCCGGAATCAAGCTTTTCTGTGGCCTTCAAGA
TGTTTGACATTGACAACAATGGGGAGATCAGTAAGGAAGAATTTAAGCAA
GTCATGGCTTTGATGAGATCTCATAACAGACAAGGGGCTTTCCATAGGGA
TGGACTTCGGACTGGGCTAAATGTTAAGGGTCCTGTGGAAAATGGAGGTC
TGGTGGAATACTTCTTTGGTGAAGATGGAAGAGCACGGCTCCAACATGAG
AAATTTGTCCAATTTATGAGAAATTTGTATGAGGAAATGCTGAGACTGGA
GTTTGCACATTATGACTACAAGCAACGGGGAACCATATCAGCCGAGGACT
TTGCGCTGTCCATGGTTGCTTCTGCTGATATGGGACACTTAAACAATTGC
TTAATCGGGTTGATCAATTAAAGAATGAGCGGCATCTTTGTGATTTACGC
ATTACATTTGAAGA
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