FC868697

Overview
NameFC868697
Unique NameFC868697
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9479 contig Ccv1_Contig9479:2..716. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31
Identity = 90/231 (38.96%), Postives = 112/231 (48.48%), Query Frame = 1
Query:  121 VASHAAISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTS--NGAT-FLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            VA  A ++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+K I+ECE
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECE 247          
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.077e-29
Identity = 61/97 (62.89%), Postives = 73/97 (75.26%), Query Frame = 1
Query:  421 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI  +FSVKPGSVEA  M + +++CE
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCE 281          
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 40/76 (52.63%), Postives = 49/76 (64.47%), Query Frame = 1
Query:  484 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI  Q SV  GS  A+ M+  + ECE
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECE 96          
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  460 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI  Q S+  GS  A+ M+  +  CE
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCE 135          
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  436 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI  Q S+   S  A+ M   + ECE
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECE 133          
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12
Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1
Query:  460 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+  + ECE
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECE 166          
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 1
Query:  424 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++  + ECE
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECE 177          
BLAST of FC868697 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.287e-11
Identity = 39/83 (46.99%), Postives = 52/83 (62.65%), Query Frame = 1
Query:  475 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFYQFSVKPGSVEAEIMQKHIKECE 711
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI  +F V+PGS +A  M   +++CE
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCE 435          
The following BLAST results are available for this feature:
BLAST of FC868697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RD22_ARATH9.875e-3138.96Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ7.077e-2962.89BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP6_ORYSJ1.692e-1452.63BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP2_ORYSJ2.887e-1447.62BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP1_ORYSJ4.168e-1344.57BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ2.069e-1249.41BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURP5_ORYSJ4.609e-1240.63BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ2.287e-1146.99BURP domain-containing protein 17 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank descriptionC31003F06EF AbioticL1 Citrus clementina cDNA clone C31003F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868697 ID=FC868697; Name=FC868697; organism=Citrus clementina; type=EST; length=715bp
GATGAAACCTAGATTTTAGATTACATACTATCTTGTATTCTGAGTGTCTT
TTGAAACATACTCAAAGCTATAATGGAGTTTCGCTTGTTGCCCATCCTTG
CTTTCCTCAGTCTAGCACTGGTGGCAAGTCATGCTGCCATTTCTCCTGAG
CTTTACTGGAAAACTGTATTGCCAAATTCCCCGATGCCAAAAGCTGTCAA
AGATCTTCTACAGCCAGATGTGCTGGAAGACAAAAGCACCTCTGTCAACG
TAGGGAAGGGTGGTGTCAATGTGGATGCAGGGAAAGGAAAGCCCGGTGGT
GGCACCCATGTGAATGTTGGGGGTAAGGGCGTTGGTGTAAACACTGGAAA
GCCTGACAAAAGAACCAGTGTTGGTGTTGGCAAAGGAGGAGTATCCGTAA
GTACAGGACACAAGGGAAAGCCAGTTTATGTTGGAGTAAGCCCATTCAAC
TATGTATATGCTGCAAATGAGAACCAACTCCATGATGACCCGAATACAGC
TCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGGATGAAGATGAACTTGC
ACTTCACTCAAACTTCAAATGGAGCAACTTTCTTATCTCGCCAAGCTGCC
AAATCAACTCCTTTCTCGTCTGACAAATTGCCTGAGATCTTTTACCAGTT
TTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAATGCAGAAACACATCA
AAGAGTGTGAAGACC
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