FC868701

Overview
NameFC868701
Unique NameFC868701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14547 contig Ccv1_Contig14547:16..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_THEMA (Anthranilate synthase component II OS=Thermotoga maritima GN=trpGD PE=3 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 4.718e-33
Identity = 68/134 (50.75%), Postives = 96/134 (71.64%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGEL--GYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +IVIDNYDSF YN+ QY+GE+      EV+RNDE+T+EE++RKNP  ++ISPGPG P+++GIS+  V      VP+ GVC+G Q +G AFGGKIV +   ++HGK+S + ++ K   G+ +G+ NP  A RYHS
Sbjct:   47 VIVIDNYDSFVYNIVQYIGEVEPDCEIEVFRNDEITIEEIERKNPTHIVISPGPGRPEEAGISVDVVRHFSGKVPILGVCLGHQVIGYAFGGKIVHAK-RILHGKTSKIVHNGK---GVFSGVKNPLVATRYHS 176          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_CYAPA (Anthranilate synthase component II OS=Cyanophora paradoxa GN=trpG PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.047e-33
Identity = 67/132 (50.76%), Postives = 94/132 (71.21%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFTYNL QY+ EL     V RND++T++E+K  N +G++ISP PG P+DSGIS   +  LG  +P+ GVC+G Q +G  FGGKI+++P  ++HGK S++++D K   G+   L NP TA RYHS
Sbjct:    2 ILLIDNYDSFTYNLAQYLSELNIKVLVKRNDKITLDEIKNLNIQGIIISPCPGGPEDSGISQGIIKYLGNQIPILGVCLGHQTIGHVFGGKIIKAP-KLIHGKPSIIFHDGK---GVFQNLKNPITATRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PSEPU (Anthranilate synthase component II OS=Pseudomonas putida GN=trpG PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.793e-32
Identity = 63/132 (47.73%), Postives = 96/132 (72.73%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +++IDNYDSFTYN+ QY+GELG   +V RNDE+T+ +++  NP  +++SPGP TP ++G+S++ +L     +P+ GVC+G Q +G+AFGG +VR+   VMHGK+S V++ +    G+  GL+NP T  RYHS
Sbjct:    3 LMMIDNYDSFTYNVVQYLGELGAEVKVIRNDEMTIAQIEALNPERIVVSPGPCTPSEAGVSIEAILHFAGKLPILGVCLGHQSIGQAFGGDVVRA-RQVMHGKTSPVHHRDL---GVFTGLNNPLTVTRYHS 130          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PORPU (Anthranilate synthase component II OS=Porphyra purpurea GN=trpG PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.216e-32
Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFTYNL Q +GELG+   V RNDE+ V ++K+ NP  ++ISPGPG P +SGISL  +  L   +P+ GVC+G Q +G   GG I++ P  +MHGK+S +Y+D    + L   L NPF A RYHS
Sbjct:    2 ILIIDNYDSFTYNLAQCVGELGHDVLVCRNDEIDVVKIKKLNPEKIIISPGPGKPTESGISLDVISSLAEYIPILGVCLGHQSIGYINGGSIIKVP-KIMHGKTSQIYHD---REDLFINLPNPFIATRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PSEAE (Anthranilate synthase component II OS=Pseudomonas aeruginosa GN=trpG PE=4 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31
Identity = 65/132 (49.24%), Postives = 94/132 (71.21%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +++IDNYDSFTYNL QY GEL    +V RNDEL+VE+++   P  +++SPGP TP ++G+SL  +      +PL GVC+G Q +G+AFGG++VR+   VMHGK+S +++ +    G+ AGL+NP T  RYHS
Sbjct:    2 LLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAGVSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRA-RQVMHGKTSPIHHKDL---GVFAGLANPLTVTRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_THET8 (Anthranilate synthase component II OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpG PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.381e-31
Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++V+DNYDSFTYNL QY+GELG    V+RND   +EE++  +P  +LISPGP TP ++G+S+  V    P  P+ GVC+G Q +G AFGGK+V +P+ +MHGK S +++D     G+  GL +PF A RYHS
Sbjct:   14 VLVVDNYDSFTYNLVQYLGELGAEPIVWRNDRFRLEEVEALDPDRILISPGPCTPFEAGLSVPLVQRYAPRYPILGVCLGHQAIGAAFGGKVVPAPV-LMHGKVSPIHHD---GTGVFRGLDSPFPATRYHS 141          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PORYE (Anthranilate synthase component II OS=Porphyra yezoensis GN=trpG PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.381e-31
Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFTYNL Q +GELGY   V RNDE+ +  +K+ NP  ++ISPGPG P DSGISL  +     ++P+ GVC+G Q +G   GG+I++    +MHGK+S +Y++    + L   L NPF A RYHS
Sbjct:    2 ILIIDNYDSFTYNLAQCVGELGYDVLVCRNDEIDIPTIKQLNPNKIIISPGPGKPSDSGISLDVISSFSDSIPILGVCLGHQSIGYLNGGRIIKVS-EIMHGKTSKIYHN---NEDLFKTLPNPFIATRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: PABA_BACSU (Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II OS=Bacillus subtilis GN=pabA PE=4 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30
Identity = 63/132 (47.73%), Postives = 91/132 (68.94%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFTYNL QY+GELG    V RND +T++E++  +P  ++ISPGP +P ++GISL+ +      +P+FGVC+G Q + + FGG +VR+   +MHGK+S + +D K    +  GL NP  A RYHS
Sbjct:    2 ILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIDEIEELSPDFLMISPGPCSPDEAGISLEAIKHFAGKIPIFGVCLGHQSIAQVFGGDVVRAE-RLMHGKTSDIEHDGK---TIFEGLKNPLVATRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_ACIAD (Anthranilate synthase component 2 OS=Acinetobacter sp. (strain ADP1) GN=trpG PE=4 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.738e-30
Identity = 60/132 (45.45%), Postives = 94/132 (71.21%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +++IDNYDSFTYN+ QY GEL    +V RND++T+E+++R  P+ +++ PGP +P ++GIS+  +      +PL GVC+G Q +G+AFGG I+R+   VMHG+ S +Y+ +K   G+ + L +PF+A RYHS
Sbjct:    2 LLMIDNYDSFTYNIVQYFGELNQDVKVVRNDQVTLEDIERWQPKYLVVGPGPCSPTEAGISIPAIHHFAGRIPLLGVCLGHQAIGQAFGGNIIRAKT-VMHGRLSDMYHTDK---GIFSNLPSPFSATRYHS 129          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: PABA_ECOLI (Para-aminobenzoate synthase glutamine amidotransferase component II OS=Escherichia coli (strain K12) GN=pabA PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29
Identity = 64/132 (48.48%), Postives = 89/132 (67.42%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFT+NL QY  ELG    V RND LT+ ++    P+ ++ISPGP TP ++GISL  +      +P+ GVC+G Q M +AFGGK+VR+   VMHGK+S + ++    +G+  GL+NP T  RYHS
Sbjct:    2 ILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKPQKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRA-AKVMHGKTSPITHN---GEGVFRGLANPLTVTRYHS 129          
The following BLAST results are available for this feature:
BLAST of FC868701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TRPG_THEMA4.718e-3350.75Anthranilate synthase component II OS=Thermotoga m... [more]
TRPG_CYAPA8.047e-3350.76Anthranilate synthase component II OS=Cyanophora p... [more]
TRPG_PSEPU1.793e-3247.73Anthranilate synthase component II OS=Pseudomonas ... [more]
TRPG_PORPU5.216e-3250.76Anthranilate synthase component II OS=Porphyra pur... [more]
TRPG_PSEAE2.589e-3149.24Anthranilate synthase component II OS=Pseudomonas ... [more]
TRPG_THET83.381e-3150.00Anthranilate synthase component II OS=Thermus ther... [more]
TRPG_PORYE3.381e-3149.24Anthranilate synthase component II OS=Porphyra yez... [more]
PABA_BACSU2.862e-3047.73Para-aminobenzoate/anthranilate synthase glutamine... [more]
TRPG_ACIAD3.738e-3045.45Anthranilate synthase component 2 OS=Acinetobacter... [more]
PABA_ECOLI9.207e-2948.48Para-aminobenzoate synthase glutamine amidotransfe... [more]

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Properties
Property NameValue
Genbank descriptionC31003F10EF AbioticL1 Citrus clementina cDNA clone C31003F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868701 ID=FC868701; Name=FC868701; organism=Citrus clementina; type=EST; length=708bp
TTTTTGTTGTCTTTTCAGTTAAAAGCGCCTTAGTTTCATATTCTCAGTCT
CGCTCTCTCCTCTCTAGCAACAATGGCGGCAATGGTTTCGCAGTCAACTC
TCATTCAAACAAAACCGTCTCTCTCTTTAAAACCCTCTCAACGGTTTCGA
CCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCCAGGGCTGAGGTTGGG
GGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAATGGCTGTGGCAGAGG
CAGTACCCATTTCGAAGTCTTTATATTTGGATGATAAGAAGAGCAAGAAT
AATAAAAATCCCATCATTGTTATTGATAATTATGATAGTTTCACTTACAA
TCTCTGCCAGTATATGGGCGAGCTTGGTTATCACTTTGAGGTTTATCGGA
ATGATGAATTAACTGTGGAGGAGTTAAAACGGAAAAATCCTAGAGGAGTG
CTTATATCCCCTGGGCCAGGCACACCTCAAGATTCTGGAATATCATTGCA
GACTGTTTTGGAACTTGGACCTACTGTGCCTCTGTTTGGTGTTTGTATGG
GTTTGCAGTGCATGGGAGAGGCTTTTGGAGGGAAGATTGTGCGTTCTCCT
CTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTATTATGATGAGAAAGG
GGAGGATGGCTTGCTTGCTGGACTATCAAATCCTTTCACAGCAGGTAGAT
ATCATAGC
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