FC868705
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868705 vs. ExPASy Swiss-Prot
Match: BPS1_ARATH (Protein BPS1, chloroplastic OS=Arabidopsis thaliana GN=BPS1 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.077e-67 Identity = 106/160 (66.25%), Postives = 137/160 (85.62%), Query Frame = 3 Query: 3 IKDLITDLELPVSDWDEKWIDVYLDISVNLLDICIAFSPVLTKVSQGHLLLQCVLHTLDSSSPTQFGRACSSLDNWREHISSKNPRVESCRSILDNLVASLDLPKVKNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAFL 482 IK LITDLELPVSDW++KW+DVYLDISV LLD+C AFS LT+++QGHLLLQ LH L+++SP +A SSLD+W++HI SKNPR+E+CR+IL +LV +L+LPKVKNSAKGKVLMRA+YGVKV T+++ +FAAAFSGS++NL+ L VS+ LPWA +F+ Sbjct: 78 IKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELTRLNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLNLPKVKNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFM 237 HSP 2 Score: 51.6026 bits (122), Expect = 1.077e-67 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 2 Query: 473 SISALQANVNAEVRNILSSGRATVLNELEAVDGSVKKLYEVI-QNEVDTVEEELLQKSVLDLGKRAEYLSQGLD 691 S +Q +NAE++NI S TVL ELEAV VKKLY I Q +D + + L+ SV +L + +S+ +D Sbjct: 235 SFMEVQNTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTELSNGIDLVSKEVD 308
BLAST of FC868705 vs. ExPASy Swiss-Prot
Match: U496D_ORYSI (UPF0496 protein 4 OS=Oryza sativa subsp. indica GN=OsI_033149 PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.865e-43 Identity = 91/163 (55.83%), Postives = 112/163 (68.71%), Query Frame = 3 Query: 3 IKDLITDLELPVSDWDEKWIDVYLDISVNLLDICIAFSPVLTKVSQGHLLLQCVLHTLDSSSPT----QFGRACSSLDNWREHISSKNPRVESCRSILDNLVASLDLPKVKNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAF 479 I +LITDLELPVSDWD+KW+D+YL+ SV LLDICIA S L+++ QG LLLQ LH L S S Q RA SL W E + + PR+ SC + L L +L L KVKNS KGKVLMRA+YG++ +TVFVCSIF A SGS K L+EL+V + W+ AF Sbjct: 78 IANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCPRLVSCSATLQELAGNLSLMKVKNSVKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAF 240
BLAST of FC868705 vs. ExPASy Swiss-Prot
Match: U496D_ORYSJ (UPF0496 protein 4 OS=Oryza sativa subsp. japonica GN=Os10g0513300 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.416e-42 Identity = 91/163 (55.83%), Postives = 112/163 (68.71%), Query Frame = 3 Query: 3 IKDLITDLELPVSDWDEKWIDVYLDISVNLLDICIAFSPVLTKVSQGHLLLQCVLHTLDSSSPT----QFGRACSSLDNWREHISSKNPRVESCRSILDNLVASLDLPKVKNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAF 479 I +LITDLELPVSDWD+KW+D+YL+ SV LLDICIA S L+++ QG LLLQ LH L S S Q RA SL W E + + R+ SC + L L +L L KVKNSAKGKVLMRA+YG++ +TVFVCSIF A SGS K L+EL+V + W+ AF Sbjct: 78 IANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELSRLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCARLVSCSATLQELAGNLSLMKVKNSAKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQAF 240 The following BLAST results are available for this feature:
BLAST of FC868705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868705 ID=FC868705; Name=FC868705; organism=Citrus clementina; type=EST; length=698bpback to top |