FC868717
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.393e-69 Identity = 132/202 (65.35%), Postives = 155/202 (76.73%), Query Frame = 3 Query: 138 PSFGSSSYSWNHHNYPQRPPYGQP------------SQEYAPQQYYATPSQSYSGRAPESTRKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 P +G+ SY NYP P Y QP +Q Y+ Y A PSQSY ++ ++LERKYSKI D+Y SLEQVT+ALARAGLESSNLIVGIDFTKSNEWTGARSF R+SLH IG NPYEQAI+IIG+TL++FDEDNLIPC+GFGDASTHDQ+VFSF +++FCNGFEEVL RY+E+VP L+LA PTSFAPII Sbjct: 37 PQYGAESY-----NYPPPPSYAQPPEYTQPPPPLYSTQPYSAPSYSAPPSQSYGS---DNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKEIVPQLKLAGPTSFAPII 230
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.491e-63 Identity = 123/207 (59.42%), Postives = 151/207 (72.95%), Query Frame = 3 Query: 126 SSRQPSFGSSSYSWNHHNYPQRPPYGQPS--------QEYAPQQYYATPSQSYSGRAPEST-----RKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 SS P + Y+ +N P PP P+ +Y+ + Y + SQ P + +K +R+YSKI DNY SL QV++AL RAGLESSNLIVGIDFTKSNEWTGA+SF R+SLHH+ + NPYEQAI+IIG+TL++FDEDNLIPC+GFGDASTHDQ+VFSFYP+ +FCNGFEEVL RYRE+VP L+LA PTSFAPII Sbjct: 60 SSYGPQYSQEGYASQPNNPP--PPTYAPAPSPASSYGHQYSQEGYASAASQPNYPPPPSQSQVADRKKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARYREIVPQLKLAGPTSFAPII 264
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 134.42 bits (337), Expect = 5.720e-31 Identity = 67/133 (50.38%), Postives = 89/133 (66.92%), Query Frame = 3 Query: 321 NYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSF---YPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 ++ +L+ + A+ AGLE SNLI GID+TKSN + G R+F +R LH I + NPY+Q I I+GKTLSSFD D IP +GFGD D +F+ Y EK CNGFEEVLR Y E+ P + ++ PT+F P+I Sbjct: 7298 HFKTLDDIVKAIKHAGLEYSNLIFGIDYTKSNFYQGERTFDKRPLHTIDPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIAERYDLEKDCNGFEEVLRVYNEVTPTIEMSGPTNFVPLI 7430
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNE1_HUMAN (Copine-1 OS=Homo sapiens GN=CPNE1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 46/160 (28.75%), Postives = 75/160 (46.88%), Query Frame = 3 Query: 246 PSQSYSGRAPESTRKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 P + ++ +++ + K +++ Y L+ V N VG+DFT SN + SLH++ N Y A+ +G + +D D L P FGFG D +V +F P +C G + ++ YR+ +P +RL PT+FAPII Sbjct: 246 PEKQQKKKSYKNSGTIRVKICRVETEYSFLDYVMGGC------QINFTVGVDFTGSNGDPSSPD----SLHYLSPTGVNEYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPII 395
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNE3_MOUSE (Copine-3 OS=Mus musculus GN=Cpne3 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 41/115 (35.65%), Postives = 59/115 (51.30%), Query Frame = 3 Query: 381 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 N VG+DFT SN + SLH+I + N Y AI +G + +D D + P FGFG +V +F P +CNG + ++ YR +P +RL PT+F+PII Sbjct: 291 NFTVGVDFTGSNGDPSSPD----SLHYISPNGVNEYLTAIWSVGLVIQDYDADKMFPAFGFGAQVPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRTCLPQIRLYGPTNFSPII 401
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNE1_MOUSE (Copine-1 OS=Mus musculus GN=Cpne1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12 Identity = 50/167 (29.94%), Postives = 76/167 (45.51%), Query Frame = 3 Query: 225 PQQYYATPSQSYSGRAPESTRKLERKYSKIDDNYHSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 P++ + SG T ++E +YS +D G + N VG+DFT SN + SLH++ N Y A+ +G + +D D L P FGFG D +V +F P +C G + ++ YR+ +P +RL PT+FAPII Sbjct: 245 PEKQQRKKNYRNSGTVRVKTCRVETEYSFLD------------YVMGGCQI-NFTVGVDFTGSNGDPSSPD----SLHYLSPTGVNEYLTALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPII 394
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNE3_PONAB (Copine-3 OS=Pongo abelii GN=CPNE3 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 3 Query: 381 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 N VG+DFT SN+ + SLH+I + N Y A+ +G + +D D + P FGFG +V +F P +CNG + ++ YR +P ++L PT+F+PII Sbjct: 291 NFTVGVDFTGSNDDPRSPD----SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLYGPTNFSPII 401
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNE2_MOUSE (Copine-2 OS=Mus musculus GN=Cpne2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 3 Query: 390 VGIDFTKSNEWTGARSFQRRSLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 VGIDFT SN SLH+I N Y AI +G+ + +D D + P GFG D +V +F P FC+G + + + Y +PH+R PT+F+PI+ Sbjct: 310 VGIDFTASN----GNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIV 417
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNE2_HUMAN (Copine-2 OS=Homo sapiens GN=CPNE2 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 3 Query: 390 VGIDFTKSNEWTGARSFQRRSLHHIGD-DQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 VGIDFT SN SLH+I N Y AI +G+ + +D D + P GFG D +V +F P FC+G + + + Y +PH+R PT+F+PI+ Sbjct: 310 VGIDFTASN----GNPLDPSSLHYINPMGTNEYLSAIWAVGQIIQDYDSDKMFPALGFGAQLPPDWKVSHEFAINFNPTNPFCSGVDGIAQAYSACLPHIRFYGPTNFSPIV 417
BLAST of FC868717 vs. ExPASy Swiss-Prot
Match: CPNE3_HUMAN (Copine-3 OS=Homo sapiens GN=CPNE3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 39/115 (33.91%), Postives = 59/115 (51.30%), Query Frame = 3 Query: 381 NLIVGIDFTKSNEWTGARSFQRRSLHHIGDDQ-NPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEV-----FSFYPDEKFCNGFEEVLRRYRELVPHLRLAXPTSFAPII 707 N VG+DFT SN + SLH+I + N Y A+ +G + +D D + P FGFG +V +F P +CNG + ++ YR +P ++L PT+F+PII Sbjct: 291 NFTVGVDFTGSNGDPRSPD----SLHYISPNGVNEYLTALWSVGLVIQDYDADKMFPAFGFGAQIPPQWQVSHEFPMNFNPSNPYCNGIQGIVEAYRSCLPQIKLYGPTNFSPII 401 The following BLAST results are available for this feature:
BLAST of FC868717 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868717 ID=FC868717; Name=FC868717; organism=Citrus clementina; type=EST; length=707bpback to top |