FC868735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.071e-51 Identity = 89/156 (57.05%), Postives = 112/156 (71.79%), Query Frame = 3 Query: 219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGM 686 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +VSWAP + Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 8.071e-51 Identity = 89/156 (57.05%), Postives = 112/156 (71.79%), Query Frame = 3 Query: 219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGM 686 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H + H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +VSWAP + Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 198.364 bits (503), Expect = 3.067e-50 Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 3 Query: 219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGM 686 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIW+E N W ++H H SSVNS+ WAPH+ GL LACGSSDG IS+ T T +G W+ +I+ AH +G +VSWAP + Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN-GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.832e-50 Identity = 89/156 (57.05%), Postives = 110/156 (70.51%), Query Frame = 3 Query: 219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGM 686 ++T HED +HD MD+YG RLAT SSD S+KI + N +A L+GH GPVWQVAWAHP +G+ILASCSYD +VIIWKE N W + H H SSVNS+ WAPH+ GL LACGSSDG IS+ T T G W+ +I+ AH +G +VSWAP + Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEEN-GTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAV 162
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.174e-47 Identity = 86/159 (54.09%), Postives = 107/159 (67.30%), Query Frame = 3 Query: 204 MPAQKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680 M Q +++GHED VHD D+YGK LAT SSD IKI + QHL L+GH GPVWQVAWAHPKFG ILAS SYD +VI+WKE N W+ H + H+ SVNSI+WAPHE GLSLAC SSDG++++ + W+ + Q +G SVSW+P Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSP 158
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.509e-46 Identity = 95/182 (52.20%), Postives = 114/182 (62.64%), Query Frame = 3 Query: 213 QKIETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE-------------GNQN----------DWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGM 686 + IET HED VHD +DFYGKRLAT SSD ++K+ + N A TL GH+GPVWQVAWAHP FG ILASCSYDG+V+IWK+ G+Q+ WT+ H +SVNSI+WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAP + Sbjct: 19 KNIETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTLHTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAV 199
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_PICGU (Protein transport protein SEC13 OS=Pichia guilliermondii GN=SEC13 PE=3 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 7.317e-44 Identity = 84/155 (54.19%), Postives = 104/155 (67.10%), Query Frame = 3 Query: 219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLA-TLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680 I H++ +HD +D+YGKRLAT SSD +IKI + + + L TL GH GPVWQVAWAHPKFGSILASCSYDG+V++WKE W+ H++SVNS++WAPHELG L C SSDG +SV D G T I +AH +G S SWAP Sbjct: 4 IANAHDELIHDAVLDYYGKRLATCSSDKTIKIFEVEGTENYQLTETLVGHEGPVWQVAWAHPKFGSILASCSYDGKVLVWKESPDRSWSIISEHKVHQASVNSVSWAPHELGAVLLCTSSDGRVSVVDFN-DDGTSTHIIFEAHKIGVNSASWAP 157
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43 Identity = 80/154 (51.95%), Postives = 105/154 (68.18%), Query Frame = 3 Query: 219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680 ++T H+D +HD +D+YGKRLAT SSD +IK+ + N+ L TL+GH GPVWQ+ WAHPKFG+ILAS SYDG VI+W+E W++ H++SVN+++WAPHE G LAC SSDG +SV DG D TRI AH G +V W+P Sbjct: 4 VDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRE-TGGVWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGSCD-TRIFTAHEPGCNAVCWSP 155
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.780e-43 Identity = 85/160 (53.12%), Postives = 110/160 (68.75%), Query Frame = 3 Query: 225 TGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHLATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKEGNQ-----NDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAPGMA 689 +GH+D +HD MD+YG+RLAT SSD +IKI L + + + TLKGH G VW VAWAHPKFG+ILAS SYDG+V+IW+E + + W++ F+ H +SVN ++WAPHELG LAC SSDG++SV D W T +I AH +G SVSWAP A Sbjct: 8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVL-EFRDNSW-THQIFHAHGMGVNSVSWAPAAA 165
BLAST of FC868735 vs. ExPASy Swiss-Prot
Match: SEC13_LODEL (Protein transport protein SEC13 OS=Lodderomyces elongisporus GN=SEC13 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.742e-43 Identity = 86/156 (55.13%), Postives = 104/156 (66.67%), Query Frame = 3 Query: 219 IETGHEDTVHDVAMDFYGKRLATASSDSSIKIIGLSNSASQHL-ATLKGHRGPVWQVAWAHPKFGSILASCSYDGQVIIWKE-GNQNDWTQAHTFNDHKSSVNSIAWAPHELGLSLACGSSDGNISVFTATADGGWDTTRIDQAHPVGSTSVSWAP 680 I HED +HD +D+YGKRLAT SSD +IKI + + + L ATL GH GP+WQVAWAHPKFGSILASCSYDG+V+IWKE + W+ H++SVNS++WAPHELG L C SSDG +SV DG D AH +G S SWAP Sbjct: 4 IGNAHEDLIHDAVLDYYGKRLATCSSDKTIKIYDIEGTENYKLTATLTGHEGPIWQVAWAHPKFGSILASCSYDGKVLIWKEQQDTQQWSIIAEHTIHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVIFD-AHAIGVNSASWAP 158 The following BLAST results are available for this feature:
BLAST of FC868735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868735 ID=FC868735; Name=FC868735; organism=Citrus clementina; type=EST; length=690bpback to top |