FC868742

Overview
NameFC868742
Unique NameFC868742
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3371 contig Ccv1_Contig3371:187..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: SUOX_ARATH (Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=1 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 1.535e-106
Identity = 182/225 (80.89%), Postives = 203/225 (90.22%), Query Frame = 3
Query:   57 MPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            MPG+  PS YSQEPPRHP L++N+KEPFNAEPPRSAL+SSYVTPVD FYKRNHGPIPIVD ++SY V++ GLI+N + LF++DIR LPKYN+TATLQCAGNRRTAMS VR V+GVGWDVSAIGNAVW GAKLADVLELVGIP LT+ T  G +HVEFVS+D+CKEENGGPYKASI LSQATNPEADVLLAYEMNGE LNRDHG+PLRVVVPG IGARSVKWLD+I
Sbjct:    1 MPGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKRNHGPIPIVDHLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLGARHVEFVSVDRCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRDHGFPLRVVVPGVIGARSVKWLDSI 225          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: SUOX_CHICK (Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3)

HSP 1 Score: 211.46 bits (537), Expect = 3.967e-54
Identity = 113/228 (49.56%), Postives = 146/228 (64.04%), Query Frame = 3
Query:   42 EEASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRM-LPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWL 722
            +EA   P    P  ++ +PPRHP L++NS++PFNAEPP   L   ++TP + F+ RNH P+P V+   SY + + G    +  L + ++R   PK+ +TATLQCAGNRR+ MS VR VKG+ WD+ AI  A W GA L DVL   G P        GG+HV F  +D   +  G PY ASIP  +A +P ADVLLAYEMNG  L RDH +P+RVVVPG +GARSVKWL
Sbjct:   85 DEAPAAPDAQDP--FAGDPPRHPGLRVNSQKPFNAEPPAELLAERFLTPNELFFTRNHLPVPAVEP-SSYRLRVDGPGGRTLSLSLAELRSRFPKHEVTATLQCAGNRRSEMSRVRPVKGLPWDIGAISTARWGGASLRDVLLHAGFPE----ELQGGEHVCFEGLDA--DPGGAPYGASIPYGRALSPAADVLLAYEMNGTELPRDHRFPVRVVVPGVVGARSVKWL 303          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: SUOX_RAT (Sulfite oxidase, mitochondrial OS=Rattus norvegicus GN=Suox PE=1 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 1.969e-53
Identity = 110/226 (48.67%), Postives = 144/226 (63.72%), Query Frame = 3
Query:   60 PGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTIT 734
            P L A   YS +P RHP L+INS+ PFNAEPP   L  SY+TP   F+ RNH P+P +D  ++Y + + G     S  L + D+   PK+ +T TLQCAGNRR+ M+ V+ VKG+ W   AI  A W+GA+L DVL   G        R    HV F  +D   +  G  Y ASIPL++A +P+A+VLLAYEMNG+PL RDHG+P+RVVVPG +GAR VKWL  ++
Sbjct:  169 PPLEASDPYSNDPMRHPALRINSQRPFNAEPPPELLTESYITPNPIFFTRNHLPVPNLDP-DTYRLHVVGAPGGQSLSLSLDDLHKFPKHEVTVTLQCAGNRRSEMNKVKEVKGLEWRTGAISTARWAGARLCDVLAQAG-----HRLRETEAHVCFEGLDS--DPTGTAYGASIPLARAMDPQAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVKWLGRVS 386          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: SUOX_MOUSE (Sulfite oxidase, mitochondrial OS=Mus musculus GN=Suox PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.386e-53
Identity = 111/231 (48.05%), Postives = 144/231 (62.34%), Query Frame = 3
Query:   45 EASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTIT 734
            E S  P + A   Y+ +P RHP L+INS+ PFNAEPP   L   Y+TP   F+ RNH P+P +D   +Y + + G     S  L + D+   PK+ +T TLQCAGNRR+ MS V+ VKG+ W   AI  A W+GA+L DVL   G     S       HV F  +D   +  G  Y ASIPL++A +PEA+VLLAYEMNG+PL RDHG+P+RVVVPG +GAR VKWL  ++
Sbjct:  164 EDSMSPSVEASDPYADDPIRHPALRINSQRPFNAEPPPELLTEGYITPNPIFFTRNHLPVPNLDP-HTYRLHVVGAPGGQSLSLSLDDLHKFPKHEVTVTLQCAGNRRSEMSKVKEVKGLEWRTGAISTARWAGARLCDVLAQAGHRLCDSEA-----HVCFEGLDS--DPTGTAYGASIPLARAMDPEAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVKWLGRVS 386          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: SUOX_DROME (Probable sulfite oxidase, mitochondrial OS=Drosophila melanogaster GN=CG7280 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.771e-53
Identity = 107/219 (48.86%), Postives = 145/219 (66.21%), Query Frame = 3
Query:   78 SSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGI-PNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            S +SQEP RH +L+  SK PFNAEPP   L   + TP + FY RNH P+P+++  E Y + I G  ++ K L +  I+ LPK+++TA + C GNRR+ M+ V+ VKG+ W   A+GNA WSGA+L D+L   G+ P+ T       KHV F   D   +    PY ASIPL++A +P  DV+LAYEMN EPL+RDHG+P+RV+VPG +GAR+VKWL  I
Sbjct:  199 SPWSQEPQRHALLKPASKRPFNAEPPIGLLAEQFYTPNELFYVRNHLPVPVINP-EDYELEIEGGAKD-KTLTLDGIKALPKHSVTAAIMCGGNRRSEMTKVKAVKGLSWGAGAVGNAKWSGARLCDILREQGVQPDET-------KHVIFEGADL--DPTSHPYGASIPLAKALDPRGDVILAYEMNDEPLSRDHGFPIRVIVPGTVGARNVKWLTRI 406          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: SUOX_MACFA (Sulfite oxidase, mitochondrial OS=Macaca fascicularis GN=SUOX PE=2 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 3.713e-52
Identity = 109/231 (47.19%), Postives = 143/231 (61.90%), Query Frame = 3
Query:   45 EASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTIT 734
            E    P +     Y+ +P RHP L++NS+ PFNAEPP   L  +Y+TP   F+ RNH P+P +D  ++Y + I G     S  L + D+   PKY IT TLQCAGNRR+ M+ V+ VKG+ W   AI  A W+GA+L DVL   G     +       HV F  +D   +  G  Y ASIPL++A +PEA VLLAYEMNG+PL RDHG+P+RVVVPG +GAR VKWL  ++
Sbjct:  163 EDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNPIFFTRNHLPVPNLDP-DTYRLHIVGAPGGQSLSLSLDDLHNFPKYEITVTLQCAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAKAGHQLCETEA-----HVCFEGLDS--DPTGTAYGASIPLARAMDPEAGVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVKWLGRVS 385          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: SUOX_HUMAN (Sulfite oxidase, mitochondrial OS=Homo sapiens GN=SUOX PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.849e-52
Identity = 107/231 (46.32%), Postives = 144/231 (62.34%), Query Frame = 3
Query:   45 EASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISSYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIEN-SKDLFMRDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTIT 734
            E    P +     Y+ +P RHP L++NS+ PFNAEPP   L  +Y+TP   F+ RNH P+P +D  ++Y + + G     S  L + D+   P+Y IT TLQCAGNRR+ M+ V+ VKG+ W   AI  A W+GA+L DVL   G     +       HV F  +D   +  G  Y ASIPL++A +PEA+VLLAYEMNG+PL RDHG+P+RVVVPG +GAR VKWL  ++
Sbjct:  163 EDKVAPTVETSDPYADDPVRHPALKVNSQRPFNAEPPPELLTENYITPNPIFFTRNHLPVPNLDP-DTYRLHVVGAPGGQSLSLSLDDLHNFPRYEITVTLQCAGNRRSEMTQVKEVKGLEWRTGAISTARWAGARLCDVLAQAGHQLCETEA-----HVCFEGLDS--DPTGTAYGASIPLARAMDPEAEVLLAYEMNGQPLPRDHGFPVRVVVPGVVGARHVKWLGRVS 385          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_ASPNG (Nitrate reductase [NADPH] OS=Aspergillus niger GN=niaD PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.418e-35
Identity = 89/215 (41.40%), Postives = 126/215 (58.60%), Query Frame = 3
Query:   99 PRHP-ILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITA--TLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWL 722
            PR P ++++    PFN EPP +AL    ++T  + FY RNHGP+P+V  +DI ++ +SI GL+E    L  RDI  L +Y+ ITA  TL CAGNRR   + VR  KG  W  + +  A+W+G  +AD+L           +    +  ++V ++   +   G Y  SI L+ A +P   ++LA++MNGE L  DHG PLR VVPG IG RSVKWL
Sbjct:   64 PRDPRLIRLTGVHPFNVEPPLTALYDEGFLTSPELFYVRNHGPVPLVKDEDIPNWEISIEGLVEKPLVLNFRDI--LQQYDQITAPITLVCAGNRRKEQNVVRKTKGFSWGSAGLSTALWTGPMMADILR----------SAKPLRKAKYVCMEGADKLPNGYYGTSIKLNWAMDPNRGIMLAHKMNGEDLRPDHGRPLRAVVPGQIGGRSVKWL 266          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.567e-34
Identity = 88/224 (39.29%), Postives = 127/224 (56.70%), Query Frame = 3
Query:   69 TAPSSYSQEPPRHPILQINSKEPFNAEPPRSALISS-YVTPVDFFYKRNHGPIPIV--DDIESYYVSICGLIENSKDLFMRDIRMLPKYN-ITA--TLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRSGGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWL 722
            T P S+    PR  ++++    PFN EPP +AL    ++TP + FY RNHGP+P V  +DI ++ + I GL+E    L  + I  L  Y+ ITA  TL CAGNRR   + VR  KG  W  +A+  A+++G  +AD+++          +    +  ++V ++       G Y  SI L+ A +P   ++LA++MNGE L  DHG PLR VVPG IG RSVKWL
Sbjct:   55 TTPDSHVPRDPR--LIRLTGVHPFNVEPPLTALFQQGFLTPPELFYVRNHGPVPHVRDEDIPNWELRIEGLVEKPITLSFKQI--LQNYDQITAPITLVCAGNRRKEQNTVRKSKGFSWGSAALSTALFTGPMMADIIK----------SAKPLRRAKYVCMEGADNLPNGNYGTSIKLNWAMDPNRGIMLAHKMNGEDLRPDHGRPLRAVVPGQIGGRSVKWL 264          
BLAST of FC868742 vs. ExPASy Swiss-Prot
Match: NIA2_PHAVU (Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris GN=NIA2 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.491e-34
Identity = 87/234 (37.18%), Postives = 117/234 (50.00%), Query Frame = 3
Query:   39 EEEASTMPGLTAPSSYSQEPPRHPILQINSKEPFNAEPPRSALIS-SYVTPVDFFYKRNHGPIPIVDDIESYYVSICGLIENSKDLFM-RDIRMLPKYNITATLQCAGNRRTAMSNVRTVKGVGWDVSAIGNAVWSGAKLADVLELVGIPNLTSVTRS-GGKHVEFVSIDKCKEENGGPYKASIPLSQATNPEADVLLAYEMNGEPLNRDHGYPLRVVVPGGIGARSVKWLDTI 731
            E EAS M      ++         ++++  K PFNAE P   L+   ++TPV   Y RNHGP+P  +  E + V I GL++      M R +R  P     ATL CAGNRR   + V+   G  W  +    +VW G  +  VL   GI     +TR  G  HV F   +      G  Y  SI    A +P  D++LAY  NGEPL  DHG+P+R+++PG IG R VKWL  I
Sbjct:   61 ETEASVMDPRDEGTADQWVARNASMVRLTGKHPFNAESPLQRLMHHGFITPVPLHYVRNHGPVPKAN-WEDWTVEITGLVKRPTRFTMDRLVREFPHREFPATLVCAGNRRKEQNMVKKTIGFNWGSAGTSTSVWRGVPVRHVLRRCGI-----LTRGKGALHVSFEGAENLPGGGGSKYGTSISREMAMDPSRDIILAYMQNGEPLAPDHGFPIRMIIPGFIGGRMVKWLKRI 288          
The following BLAST results are available for this feature:
BLAST of FC868742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
SUOX_ARATH1.535e-10680.89Sulfite oxidase OS=Arabidopsis thaliana GN=SOX PE=... [more]
SUOX_CHICK3.967e-5449.56Sulfite oxidase OS=Gallus gallus GN=SUOX PE=1 SV=3[more]
SUOX_RAT1.969e-5348.67Sulfite oxidase, mitochondrial OS=Rattus norvegicu... [more]
SUOX_MOUSE4.386e-5348.05Sulfite oxidase, mitochondrial OS=Mus musculus GN=... [more]
SUOX_DROME9.771e-5348.86Probable sulfite oxidase, mitochondrial OS=Drosoph... [more]
SUOX_MACFA3.713e-5247.19Sulfite oxidase, mitochondrial OS=Macaca fascicula... [more]
SUOX_HUMAN4.849e-5246.32Sulfite oxidase, mitochondrial OS=Homo sapiens GN=... [more]
NIA_ASPNG1.418e-3541.40Nitrate reductase [NADPH] OS=Aspergillus niger GN=... [more]
NIA_EMENI1.567e-3439.29Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]
NIA2_PHAVU3.491e-3437.18Nitrate reductase [NADH] 2 OS=Phaseolus vulgaris G... [more]

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Properties
Property NameValue
Genbank descriptionC31004C04EF AbioticL1 Citrus clementina cDNA clone C31004C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868742 ID=FC868742; Name=FC868742; organism=Citrus clementina; type=EST; length=740bp
GGCATACTTAAGAAAGCTTTCGACTCCAGTGAAGGAGAGAAGAAGAAGCT
TCGACTATGCCGGGACTAACAGCACCATCAAGTTACTCTCAAGAGCCGCC
TCGTCATCCTATCCTTCAAATTAATTCCAAGGAACCATTCAATGCGGAGC
CGCCGCGGTCGGCCTTGATTTCATCTTACGTGACGCCTGTTGATTTTTTC
TACAAGAGAAATCATGGCCCAATTCCGATAGTTGATGATATTGAAAGCTA
TTATGTCTCAATATGTGGTTTAATTGAAAATTCCAAAGACCTGTTTATGA
GGGATATTCGGATGCTCCCAAAATACAACATCACTGCCACTTTGCAGTGT
GCGGGTAACCGAAGGACAGCGATGAGCAATGTCAGAACGGTGAAGGGAGT
TGGCTGGGATGTTTCTGCTATAGGAAATGCTGTCTGGAGTGGTGCCAAAT
TGGCTGATGTTCTTGAACTGGTTGGGATACCAAACTTGACAAGTGTCACT
AGGTCAGGTGGAAAACATGTTGAATTTGTAAGCATTGACAAGTGTAAGGA
GGAGAATGGGGGTCCATATAAAGCATCAATTCCACTTAGTCAAGCTACAA
ACCCAGAAGCTGATGTTTTACTTGCGTATGAGATGAATGGAGAGCCTCTT
AATAGAGATCATGGTTATCCTCTTCGGGTAGTTGTACCGGGTGGTATAGG
TGCTCGTTCTGTCAAATGGTTGGATACCATCACATCCTTG
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