FC868743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_ARATH (Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2) HSP 1 Score: 352.443 bits (903), Expect = 1.385e-96 Identity = 162/210 (77.14%), Postives = 182/210 (86.67%), Query Frame = 2 Query: 83 EDFSDLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHF 712 ++ +L Y+SGFGN FSSEAI GALP NSPL+CP+GLYAEQISGTSFTSPRKLNQRSWLYR+KPS THEPFKPRVPAH KLVSEFD SNS T PTQLRW+P DIPDS DF+DGL+TICGAGSSFLRHG+AIHMY N M + AFCNADGDFL+VPQ GRLWI TECG+L V+PGEIAV+PQGFRF++ LPDG SRGY+AEI+G HF Sbjct: 6 KELEELKYQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPSVTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSFLRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGFRFSIDLPDGKSRGYVAEIYGAHF 215
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_ORYSJ (Homogentisate 1,2-dioxygenase OS=Oryza sativa subsp. japonica GN=HGO PE=2 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 3.654e-89 Identity = 153/207 (73.91%), Postives = 172/207 (83.09%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYT--TPTQLRWKPVDIPDS--PTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFGTHF 712 Y SG GNS SSEA+ G LPRG NSPLVCP GLYAEQ+SGT FT+PR N R+WLYRIKPS THEPF PR PAH +L+ +FD++ + T TPTQLRW+P D+P P DFIDGLYT+CGAGSSFLRHGYAIHMY NKSMD CAFCNADGDFL+VPQ+G+L I TECGKL V PGEI V+PQGFRFAV LPDGPSRGY++EIFGTHF Sbjct: 24 YLSGLGNSLSSEAVAGTLPRGQNSPLVCPLGLYAEQLSGTPFTAPRARNLRTWLYRIKPSVTHEPFHPRRPAHPRLIGDFDRTTTDTVATPTQLRWRPADVPPHHPPLDFIDGLYTVCGAGSSFLRHGYAIHMYAANKSMDGCAFCNADGDFLIVPQQGKLLITTECGKLLVPPGEIVVIPQGFRFAVDLPDGPSRGYVSEIFGTHF 230
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURCJ (Homogentisate 1,2-dioxygenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hmgA PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.916e-62 Identity = 118/202 (58.42%), Postives = 150/202 (74.26%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGDARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURCH (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain HI2424) GN=hmgA PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 118/202 (58.42%), Postives = 150/202 (74.26%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGNARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURCA (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain AU 1054) GN=hmgA PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.808e-62 Identity = 118/202 (58.42%), Postives = 150/202 (74.26%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGNARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURS3 (Homogentisate 1,2-dioxygenase OS=Burkholderia sp. (strain 383) GN=hmgA PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.495e-62 Identity = 116/206 (56.31%), Postives = 152/206 (73.79%), Query Frame = 2 Query: 92 SDLNYESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 ++ Y+SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G++EV P EIAV+P+G RF+V+LPDG +RGYI E FG Sbjct: 9 ANAGYQSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGPQ-RLVSEFGDSADVPPTPPDQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRVEVEPFEIAVIPRGVRFSVTLPDGDARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURVG (Homogentisate 1,2-dioxygenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hmgA PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.108e-61 Identity = 115/202 (56.93%), Postives = 150/202 (74.26%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGFGN F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+R+WLYRI+P+A H PF+P +LV+EF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG Sbjct: 13 YLSGFGNEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRAWLYRIRPAAVHRPFEP-FTGRQRLVAEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPAEIAVIPRGVRFAVALPDGDARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURA4 (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain MC40-6) GN=hmgA PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.468e-61 Identity = 116/202 (57.43%), Postives = 150/202 (74.26%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P V +LVSEF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF+V+LPDG +RGYI E FG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEP-VTGPQRLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDGDARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURCC (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain MC0-3) GN=hmgA PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.210e-61 Identity = 117/202 (57.92%), Postives = 149/202 (73.76%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ + PTDF+DGL T+ G GS+ +G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RGYI E FG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMLVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGDARGYICENFG 213
BLAST of FC868743 vs. ExPASy Swiss-Prot
Match: HGD_BURM1 (Homogentisate 1,2-dioxygenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hmgA PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 7.181e-61 Identity = 115/202 (56.93%), Postives = 148/202 (73.27%), Query Frame = 2 Query: 104 YESGFGNSFSSEAIDGALPRG*NSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTTNKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRGYIAEIFG 703 Y SGF N F++EA+ GALP G NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVS+F S T P QLRW P+ +P PTDF++GL T+ G GS+ G AIH+Y N+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF V+LPDG +RGYI E FG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPFAGAQ-RLVSDFADSADVPPTPPNQLRWNPLPMPSEPTDFVEGLVTMAGNGSAAAMSGCAIHLYAANRSMRDRFFYSADGELLIVPQQGRLFIATELGRLDVEPFEIAVIPRGVRFTVALPDGDARGYICENFG 213 The following BLAST results are available for this feature:
BLAST of FC868743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868743 ID=FC868743; Name=FC868743; organism=Citrus clementina; type=EST; length=724bpback to top |