FC868782

Overview
NameFC868782
Unique NameFC868782
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11614 contig Ccv1_Contig11614:502..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868782 vs. ExPASy Swiss-Prot
Match: Y5713_ARATH (PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.164e-87
Identity = 75/93 (80.65%), Postives = 87/93 (93.55%), Query Frame = 3
Query:    3 EVEAFLSQYPTEIVTIIIEDYVQTPKGLTSLFVRAGLDKYFFPVSKMPKKGEDWPTVTEMVQKNYRLLVFSSVASKEAEEGIAYQWRYILENE 281
            EVEAFLSQ PTEIVTIIIEDYV  PKGL++LF  AGLDKY+FPVSKMP+KGEDWPTVT+MVQ+N+RLLVF+SVA+KE EEG+AYQWRY++ENE
Sbjct:  164 EVEAFLSQNPTEIVTIIIEDYVHRPKGLSTLFANAGLDKYWFPVSKMPRKGEDWPTVTDMVQENHRLLVFTSVAAKEDEEGVAYQWRYMVENE 256          

HSP 2 Score: 160.614 bits (405), Expect = 4.164e-87
Identity = 71/90 (78.89%), Postives = 82/90 (91.11%), Query Frame = 1
Query:  370 HSAGDPGVKAGSCPHRKESQPLNSRKASLFLQNYFPTYPVEEDACKEHSTPLAEMVGTCYKAAGNLLPNFLAVNFYMRSDGGGVFDVLDK 639
            + +GDPGVK GSCP+RKESQPLNS+ +SLFL NYFPTYPVE+DACKEHS PLAEMVGTC K+ GN +PNFLAVNFYMRSDGGGVF++LD+
Sbjct:  255 NESGDPGVKRGSCPNRKESQPLNSKSSSLFLMNYFPTYPVEKDACKEHSAPLAEMVGTCLKSGGNRMPNFLAVNFYMRSDGGGVFEILDR 344          

HSP 3 Score: 43.5134 bits (101), Expect = 4.164e-87
Identity = 17/27 (62.96%), Postives = 20/27 (74.07%), Query Frame = 3
Query:  639 MNGQTLCGCSTVLACQGGAPFGSCKTL 719
            MNG  LCGC T+ ACQ GA +GSCK +
Sbjct:  345 MNGPVLCGCETLSACQPGAAYGSCKNV 371          
The following BLAST results are available for this feature:
BLAST of FC868782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5713_ARATH4.164e-8780.65PI-PLC X domain-containing protein At5g67130 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionC31004G01EF AbioticL1 Citrus clementina cDNA clone C31004G01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868782 ID=FC868782; Name=FC868782; organism=Citrus clementina; type=EST; length=725bp
GGGAAGTGGAAGCATTTTTAAGTCAGTATCCTACCGAGATTGTAACTATT
ATAATAGAGGACTATGTTCAAACTCCAAAAGGATTAACAAGTTTGTTTGT
TCGGGCTGGTTTGGATAAGTACTTCTTCCCTGTGTCCAAGATGCCAAAGA
AAGGTGAAGATTGGCCCACTGTCACAGAAATGGTGCAAAAGAACTATCGG
CTTCTTGTTTTCTCTTCTGTTGCTTCGAAGGAAGCTGAGGAGGGAATAGC
TTATCAATGGAGATACATACTTGAAAATGAATGTAAGTGTCATATAATGT
CATGTTTTTAGTACTTGGGAGTTGCATACATGTCTTCCTATAATAGCTAC
ACAGTATGTTGGCATGTTGCATTCAGCTGGAGATCCAGGGGTGAAAGCAG
GCTCTTGTCCGCATAGAAAAGAATCACAACCTCTGAATTCAAGAAAGGCA
TCTCTTTTCCTACAAAATTACTTCCCTACATATCCAGTTGAAGAGGATGC
TTGCAAAGAGCATTCAACTCCACTTGCAGAGATGGTTGGTACTTGTTACA
AAGCTGCAGGGAACCTGTTGCCTAACTTTTTGGCAGTCAATTTTTACATG
AGGAGTGATGGTGGTGGTGTCTTTGATGTTTTGGATAAATGAATGGCCAG
ACATTGTGTGGCTGTAGTACTGTGCTTGCCTGCCAGGGTGGAGCACCATT
TGGATCTTGCAAAACATTGCCGTGC
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