FC868785

Overview
NameFC868785
Unique NameFC868785
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA4_NICPL (Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 9.946e-43
Identity = 79/116 (68.10%), Postives = 87/116 (75.00%), Query Frame = 2
Query:  287 KAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            KAISLEEIKNE+VDLE+IPIEEVFEQLKC+REGL++DEGA RL +FGPN              GFMWNPLSWVME          NG G+ PDWQDF+GII LLVINSTISFIEEN
Sbjct:    3 KAISLEEIKNETVDLEKIPIEEVFEQLKCTREGLSADEGASRLQIFGPNKLEEKNESKILKFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIEEN 118          

HSP 2 Score: 33.8834 bits (76), Expect = 9.946e-43
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDGRWSEQ+A+I
Sbjct:  135 TKVLRDGRWSEQEAAI 150          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 8.945e-41
Identity = 79/120 (65.83%), Postives = 86/120 (71.67%), Query Frame = 2
Query:  275 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            MGG     LEEI+NE+VDLE IPIEEVFEQLKC+R+GLTSDEGA R+ +FG N              GFMWNPLSWVME          NGGG+ PDWQDFVGIIVLLVINSTISFIEEN
Sbjct:    1 MGG-----LEEIRNEAVDLENIPIEEVFEQLKCTRQGLTSDEGAQRVEIFGLNKLEEKKESKVLKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWQDFVGIIVLLVINSTISFIEEN 115          

HSP 2 Score: 33.4982 bits (75), Expect = 8.945e-41
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDGRW EQ+ASI
Sbjct:  132 TKVLRDGRWGEQEASI 147          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA9_ARATH (ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 2.578e-40
Identity = 75/120 (62.50%), Postives = 84/120 (70.00%), Query Frame = 2
Query:  275 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            M G+K  S ++IKNE +DLE+IPIEEV  QL+C+REGLTSDEG  RL +FGPN              GFMWNPLSWVME          NGGGR PDWQDFVGI VLL+INSTISFIEEN
Sbjct:    1 MAGNKDSSWDDIKNEGIDLEKIPIEEVLTQLRCTREGLTSDEGQTRLEIFGPNKLEEKKENKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIEEN 120          

HSP 2 Score: 32.7278 bits (73), Expect = 2.578e-40
Identity = 13/16 (81.25%), Postives = 16/16 (100.00%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDG+WSEQ+A+I
Sbjct:  137 TKVLRDGKWSEQEAAI 152          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 3.359e-40
Identity = 78/120 (65.00%), Postives = 86/120 (71.67%), Query Frame = 2
Query:  275 MGGDKAISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            MGG     LEEIKNE+VDLE IPIEEVFEQLKC+REGL+S+EG  R+ +FGPN              GFMWNPLSWVME          NGGG+ PDW+DFVGIIVLLVINSTISFIEEN
Sbjct:    1 MGG-----LEEIKNEAVDLENIPIEEVFEQLKCTREGLSSEEGNRRIEMFGPNKLEEKKESKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIEEN 115          

HSP 2 Score: 32.3426 bits (72), Expect = 3.359e-40
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDGRW EQ+A+I
Sbjct:  132 TKVLRDGRWGEQEAAI 147          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA2_ARATH (ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 5.701e-40
Identity = 75/113 (66.37%), Postives = 82/113 (72.57%), Query Frame = 2
Query:  296 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            SLE+IKNE+VDLE+IPIEEVF+QLKCSREGLT+ EG  R+ +FGPN              GFMWNPLSWVME          NG GR PDWQDFVGII LLVINSTISFIEEN
Sbjct:    3 SLEDIKNETVDLEKIPIEEVFQQLKCSREGLTTQEGEDRIQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEEN 115          

HSP 2 Score: 32.7278 bits (73), Expect = 5.701e-40
Identity = 13/16 (81.25%), Postives = 16/16 (100.00%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDG+WSEQ+A+I
Sbjct:  132 TKVLRDGKWSEQEAAI 147          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA8_ARATH (ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.643e-39
Identity = 73/113 (64.60%), Postives = 83/113 (73.45%), Query Frame = 2
Query:  296 SLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            S +EIK E+VDLERIP+EEVFEQLKCS+EGL+SDEGA RL +FG N              GFMWNPLSWVME          NGGG+ PDWQDF+GI+VLL+INSTISFIEEN
Sbjct:    6 SWDEIKKENVDLERIPVEEVFEQLKCSKEGLSSDEGAKRLEIFGANKLEEKSENKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEEN 118          

HSP 2 Score: 32.3426 bits (72), Expect = 1.643e-39
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDG+W EQ+ASI
Sbjct:  135 TKVLRDGKWGEQEASI 150          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA3_ARATH (ATPase 3, plasma membrane-type OS=Arabidopsis thaliana GN=AHA3 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 3.633e-39
Identity = 72/115 (62.61%), Postives = 82/115 (71.30%), Query Frame = 2
Query:  290 AISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            A  LE+I NE+VDLE+IPIEEVF+QLKCSREGL+  EG +RL +FGPN              GFMWNPLSWVME          NGGG+ PDWQDFVGI+ LLVINSTISF+EEN
Sbjct:    2 ASGLEDIVNENVDLEKIPIEEVFQQLKCSREGLSGAEGENRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVEEN 116          

HSP 2 Score: 33.8834 bits (76), Expect = 3.633e-39
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDG+WSEQ+ASI
Sbjct:  133 TKVLRDGKWSEQEASI 148          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-38
Identity = 71/112 (63.39%), Postives = 82/112 (73.21%), Query Frame = 2
Query:  299 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            L+ IKNESVDL RIP+EEVFE+LKC+++GLT++E +HRL VFGPN              GFMWNPLSWVME          NGGGR PDWQDFVGI+ LL+INSTISFIEEN
Sbjct:    4 LDHIKNESVDLVRIPMEEVFEELKCTKQGLTANEASHRLDVFGPNKLEEKKESKLLKFLGFMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIEEN 115          

HSP 2 Score: 31.187 bits (69), Expect = 3.014e-38
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRD +WSEQ+ASI
Sbjct:  132 TKVLRDNQWSEQEASI 147          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA6_ARATH (ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.014e-38
Identity = 71/114 (62.28%), Postives = 82/114 (71.93%), Query Frame = 2
Query:  293 ISLEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            IS +EIK E+VDLE+IP++EVF+QLKCSREGL+S+EG +RL +FG N              GFMWNPLSWVME          NGGGR PDWQDFVGI  LL+INSTISFIEEN
Sbjct:    5 ISWDEIKKENVDLEKIPVDEVFQQLKCSREGLSSEEGRNRLQIFGANKLEEKVENKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEEN 118          

HSP 2 Score: 32.3426 bits (72), Expect = 3.014e-38
Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDGRW EQ+A+I
Sbjct:  135 TKVLRDGRWGEQEAAI 150          
BLAST of FC868785 vs. ExPASy Swiss-Prot
Match: PMA1_ARATH (ATPase 1, plasma membrane-type OS=Arabidopsis thaliana GN=AHA1 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 3.927e-38
Identity = 72/112 (64.29%), Postives = 80/112 (71.43%), Query Frame = 2
Query:  299 LEEIKNESVDLERIPIEEVFEQLKCSREGLTSDEGAHRLHVFGPNXXXXXXXXXXXXXXGFMWNPLSWVMEXXXXXXXXXXNGGGRDPDWQDFVGIIVLLVINSTISFIEEN 634
            LE+IKNE+VDLE+IPIEEVF+QLKC+REGLT+ EG  R+ +FGPN              GFMWNPLSWVME          NG  R PDWQDFVGII LLVINSTISFIEEN
Sbjct:    4 LEDIKNETVDLEKIPIEEVFQQLKCTREGLTTQEGEDRIVIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIEEN 115          

HSP 2 Score: 32.7278 bits (73), Expect = 3.927e-38
Identity = 13/16 (81.25%), Postives = 16/16 (100.00%), Query Frame = 3
Query:  681 TKVLRDGRWSEQDASI 728
            TKVLRDG+WSEQ+A+I
Sbjct:  132 TKVLRDGKWSEQEAAI 147          
The following BLAST results are available for this feature:
BLAST of FC868785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PMA4_NICPL9.946e-4368.10Plasma membrane ATPase 4 OS=Nicotiana plumbaginifo... [more]
PMA1_WHEAT8.945e-4165.83Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]
PMA9_ARATH2.578e-4062.50ATPase 9, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ORYSJ3.359e-4065.00Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA2_ARATH5.701e-4066.37ATPase 2, plasma membrane-type OS=Arabidopsis thal... [more]
PMA8_ARATH1.643e-3964.60ATPase 8, plasma membrane-type OS=Arabidopsis thal... [more]
PMA3_ARATH3.633e-3962.61ATPase 3, plasma membrane-type OS=Arabidopsis thal... [more]
PMA5_ARATH3.014e-3863.39ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]
PMA6_ARATH3.014e-3862.28ATPase 6, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ARATH3.927e-3864.29ATPase 1, plasma membrane-type OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC31004G05EF AbioticL1 Citrus clementina cDNA clone C31004G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868785 ID=FC868785; Name=FC868785; organism=Citrus clementina; type=EST; length=728bp
GAATTGAAGCCAGTGTTCTCATTTTCTCAAATCGAATCACCAAACCAAAA
ACGACATTCATTTCACCAAAATTAAAAAATTCAATGCCCGTGGTACAAAA
TTTTCTTTTGTTAGACTTTTAATCAAGATGTCATCTTCGATTATGACTCT
CTGAGAAATTTCGCTTAGTCATTTTTATATATATTTTTAGAATATCCTCA
AATTTTACGTATATATAAATCGTTCACTCTTGCAAAGGAATTGTAAGAAA
CTCACAGTTGCTTGAGCTTCTACGATGGGCGGCGATAAGGCCATCAGCCT
CGAGGAAATCAAAAACGAGTCCGTTGATCTGGAACGGATTCCTATAGAGG
AAGTTTTTGAGCAGCTAAAATGTTCAAGAGAAGGTCTGACTTCGGACGAA
GGAGCCCACAGGCTTCATGTTTTTGGCCCCAACAAACTAGAAGAGAAAAA
GGAAAGCAAAGTCCTCAAGTTTTTGGGATTTATGTGGAATCCTTTGTCGT
GGGTCATGGAAGCTGCTGCCATTATGGCTATTGCCTTGGCCAATGGTGGT
GGAAGGGATCCTGATTGGCAGGATTTTGTTGGTATCATTGTCTTGTTGGT
AATCAACTCCACAATCAGCTTTATTGAAGAAAACATGCTGGCAATGCAGC
AGCAGCTCTCATGGCTAATCTGGCTCCTAAACTAAGGTTCTGAGAGATGG
CCGATGGAGTGAGCAAGATGCCTCGATT
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