FC868790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.031e-66 Identity = 124/176 (70.45%), Postives = 147/176 (83.52%), Query Frame = 1 Query: 154 ASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCS 681 A Q +REW+GIQQFPPATQ+ +E+V++LT+LVMGKGGVGKSSTVNS+IGEKA VSTFQSEG RP +VSR+R+GFTLNI+DTPGLIEGGYVN AI +IKRFLLN TIDVLLYVDRLDVYRVD+LD+Q+ AITD FG++IWK++ +VLTHAQ S PDGL+Y F S Sbjct: 3 ALQTLREWIGIQQFPPATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDGLNYNHFVS 178
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.759e-66 Identity = 124/179 (69.27%), Postives = 144/179 (80.45%), Query Frame = 1 Query: 145 MSMASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCS 681 M+ Q +REW GI F PATQT QE+VN+LTILVMGKGGVGKSSTVNSIIGE+ V++S FQSEGPRPVMVSRSRAGFTLNI+DTPGLIEGGY+N A+ +IK FLL+KTIDVLLYVDRLD YRVDNLDK + +AITD+FG+ IW +A++ LTHAQ S PDGL Y+ F S Sbjct: 1 MASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFS 179
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.460e-60 Identity = 111/173 (64.16%), Postives = 138/173 (79.77%), Query Frame = 1 Query: 163 VIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCS 681 ++REW+G QQFP ATQ Q+++N++T+LV+GKGGVGKSSTVNS+IGE+ V VS FQ+EG RPVMVSR+ GFT+NI+DTPGL+E GYVN+ A++LIK FL+N+TIDVLLYVDRLDVYRVD LDKQ+ AIT FG++IW + L+VLTHAQ S PD L YE F S Sbjct: 4 LVREWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSS 176
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.613e-19 Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 244 QENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVF 675 +E + +L ILV+GK GVGKS+T+NSI+G + ++ F +S + G + +DTPGL N + +K+ + D++LYVDRLD D + + R IT + G IWK A++ LTHA + PDG L Y+VF Sbjct: 850 EELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVF 1001
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.107e-19 Identity = 50/134 (37.31%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 265 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGG---YVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG 657 TI+V+GK GVGKS+T+NSI E ++ FQ + + G + ++DTPGL+ + N ++ ++ F+ D++LY+DRLD+ D+ D + R ITD FG IW A++ LTHA + PDG Sbjct: 458 TIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDG 591
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 265 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG 657 TI+V+GK GVGKS+T+NSI E FQ R V G + ++DTPGL+ N + +K F+ D++LY+DRLD+ D+ D + R I+D FG IW A++ LTHA PDG Sbjct: 576 TIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDG 709
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: GTPA_DICDI (GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.156e-17 Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 1 Query: 256 NTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIE--GGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPD 654 N +L++G+ GVGKSST+N++ G + V + +S P SR GF LNI+DTPG ++ G V+ + + I+R+L KTI +L+V++ R D + + T+ G Q+W+ A +VLT+A LPD Sbjct: 150 NECNVLLLGRTGVGKSSTLNTVFGID-IPVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNAAVVLTYANSVLPD 283
BLAST of FC868790 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 259 TLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGL----IEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHA 636 +L ILV+GK GVGKS+T+NSI G+ F+ R V + +G + +DTPG N + IKR++ + DV+LY+DRLD+ + D + + IT+ FG IW ++V+TH+ Sbjct: 166 SLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHS 295 The following BLAST results are available for this feature:
BLAST of FC868790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868790 ID=FC868790; Name=FC868790; organism=Citrus clementina; type=EST; length=682bpback to top |