FC868796
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868796 vs. ExPASy Swiss-Prot
Match: FDL1_ARATH (F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana GN=At1g13570 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.165e-14 Identity = 64/198 (32.32%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 189 DWISRLPDEILVNIISRLAVREAARTSVLSSRWKYLWTFTTCLNFSALKMLWNVKKDPATLEEERYNYINWVNDVLDSHMGLCINEFRLCFELRNSHGSFITHWIFTALAKKVQKLELNLHPVGGGFWPPLELYAFPPECLKL---------FRSPRTLSNIKSLRSLCLDAVNVSGEVLEFFIYSCPLSARLRVGLF 755 D+IS LP I+ NI++RL++R+A RTSVLSS+W+Y W+ T L F + + D +E N + ++ VL H G I++F+L + I W+ +++L L L G F P L+ CLKL F P+ L+SL L + V+ EV+E I CPL L + F Sbjct: 6 DFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFD--EKCVSPSNDRCVVET---NLVRFITGVLLLHQG-PIHKFQLSTSFKQCRPD-IDQWLLFLSRNGIKELVLKLGE--GEFRVPACLF----NCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQILVAPEVIESLISGCPLLEFLSLSYF 190
BLAST of FC868796 vs. ExPASy Swiss-Prot
Match: FDL32_ARATH (Putative F-box/FBD/LRR-repeat protein At5g22670 OS=Arabidopsis thaliana GN=At5g22670 PE=4 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.855e-13 Identity = 60/205 (29.27%), Postives = 90/205 (43.90%), Query Frame = 3 Query: 159 LDTKQDEILVDWISRLPDEILVNIISRLAVREAARTSVLSSRWKYLWTFTTCLNFSALKMLWNVKKDPATLEEERYNYINWVNDVLDSHMGLCINEFRLCFELRNSHGSFITHWIFTALAKKVQKLELNLHPVGGGFWPPLELYAFPPECLKLFRSPR---------TLSNIKSLRSLCLDAVNVSGEVLEFFIYSCPLSARLRV 746 + TK+ D IS LPD++L I+S L + A RTSVLS RWK L F+ + Y + V+ LD+ CI++ +L FE + S++T WI A+ +KVQ L++ G P LY E L R +L +K++ +D + + +LE I SCP+ L V Sbjct: 1 MSTKRGVTSQDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSEF------------HGYYEFARVVHGFLDTSRETCIHKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLDIGRWSYLGQELIPHSLYTC--ETLVSLRLHNVSLPDFDHVSLPRLKTMH--LIDNIYPNDALLENLISSCPVLEDLNV 189
BLAST of FC868796 vs. ExPASy Swiss-Prot
Match: FBL39_ARATH (F-box/LRR-repeat protein At2g42730 OS=Arabidopsis thaliana GN=At2g42730 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.286e-12 Identity = 62/198 (31.31%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 189 DWISRLPDEILVNIISRLAVREAARTSVLSSRWKYLWTFTTCLNFSALKMLWNVKKDPATLEEERYNYINWVNDVLDSHMGLCINEFRLCFEL---RNSHGSFITHWIFTALAKKVQKLELNLHPVGGGFWPPLELYAFPPECLKLFRSPRTLS-------NIKSLRSLCLDAVNVSG--EVLEFFIYSCPLSARLRV 746 D ISRLPDE+L I+S ++ +EA TSVLS RWK ++ + L+ + +V K E NY+ +V+ +LD+ G I + L + + S I WI L V L++ + G PP+ F + L R R + ++ LR+LCLD+VN G V+ I CP+ L V Sbjct: 5 DVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQ---SVPKTKQNRIEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDVFITLKGKS--PPVPAMIFKSKTLVKLRVGRGFTIKLSQDVSLPLLRTLCLDSVNFVGGHNVVGTLISRCPVLEELVV 197
BLAST of FC868796 vs. ExPASy Swiss-Prot
Match: FBD31_ARATH (Putative FBD-associated F-box protein At5g53630 OS=Arabidopsis thaliana GN=At5g53630 PE=4 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12 Identity = 53/192 (27.60%), Postives = 94/192 (48.96%), Query Frame = 3 Query: 195 ISRLPDEILVNIISRLAVREAARTSVLSSRWKYLWTFTTCLNFSALKMLWNVKKDPATLEEERYNYINWVNDVLDSHMGLCINEFRLC---FELRNSHGSFITHWIFTALAKKVQKLELNLHPVGGGFWPPLELYAFPP-ECLKLFR---SPRTLSNIKSLRSLCLDAVNVSGEV-LEFFIYSCPLSARLRV 746 IS+LPD ++ +I+S L +++ T VLS+RW+ LW + CL ++L + ++++ + DS+ CIN+F+L +++ S++T WI A+ K+Q L + P + PL LY LKL R ++ L+++ L+ V E LE F+ CP+ L++ Sbjct: 2 ISQLPDPLICHILSHLPIKDLVTTRVLSTRWRSLWLWLPCLELNSLYF------------PDFNAFVSFGDKFFDSNRVSCINKFKLYIYGYDVGVDDPSYLTSWIDAAVKCKIQHLHVQCLPAKYIYEMPLSLYICETLVYLKLCRVMLDDAEFVSLPCLKTIHLEYVWFPNEANLERFVSCCPVLEELKI 181 The following BLAST results are available for this feature:
BLAST of FC868796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868796 ID=FC868796; Name=FC868796; organism=Citrus clementina; type=EST; length=757bpback to top |