FC868825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 1.834e-59 Identity = 111/192 (57.81%), Postives = 139/192 (72.40%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 +VA++VT FF+GIKNQA + CEGK FYTR AF+SA+++YP F T KRE+AAFFAHVTHET FC++ EI+K+N YC + Q+PCA G+ YYGRGP+Q++ N NY AGR IGF+GL P VA+D VI+FKTALW+WM VH + QGFG TIR ING EC G N AQ+ RV Y YC++L Sbjct: 79 NVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQL 270
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.086e-59 Identity = 109/192 (56.77%), Postives = 134/192 (69.79%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFG----RTDTKREVAAFFAHVTHETTDFCFVEEISKTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 +VA +VT FF+GIKNQA + CEGK FYTR AF+SA+ YP F + KRE+AAFFAH THET FC++ EI+K+N YC PT Q+PCA G+ YYGRGP+Q++ N NY AGRAIGFDGL P VARD V++FK ALW+WM VH + QGFG T R + ECGG N AQ+ RV Y YC++L Sbjct: 68 NVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQL 259
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.707e-58 Identity = 111/195 (56.92%), Postives = 138/195 (70.77%), Query Frame = 2 Query: 62 NSVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTP--QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 N AD++T +F +GI +QA + C GK FYTRDAF+SAL+SY +FGR D+KRE+AA FAH THET FC++EEI + YC QYPC++ K Y+GRGPIQL+ N NY AG A FDGL +PETV+ D V+SFKTALWYWM++V +NQGFG TIR ING EC G N VQ RV YT+YC++L Sbjct: 66 NVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQL 260
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 7.213e-56 Identity = 108/196 (55.10%), Postives = 134/196 (68.37%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMR----YVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 +V+D+VT EF+DGI +QA A C GK FYTR F+ A+S+YP FG D KRE+AA+FAHVTHET C++EE N YC + QYPC K Y+GRGP+QL+ N NYIDAG+ + FDGLN P+ V RD +ISFKT+LW+W+R YV NQGFG TIR ING EC G N AQ+ RV Y +YC +L Sbjct: 45 TVSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQL 240
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 1.607e-55 Identity = 106/192 (55.21%), Postives = 130/192 (67.71%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEISKTN-PYCTPT-PQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKR 622 SV +VT FF+GIKNQAP C GK FYTR +F++A SY F D+KRE+AAFFAHVTHET C++ EI+ N YC + Q+PC GK YYGRGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH ++QGFG TIR ING EC G+N V RV Y DYC++ Sbjct: 83 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQ 274
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.975e-55 Identity = 106/192 (55.21%), Postives = 129/192 (67.19%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEISKTN-PYCTPT-PQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKR 622 SV +VT FF+GIKNQAP C GK FYTR +F++A SY F R D+KRE+AAFFAHVTHET C++ EI+ + YC Q+PC GK YYGRGP+Q++ N NY AG+ IGFDGL P+ VA+D ISFKTALW+WM VH + QGFG TIR ING EC G+N V RV Y DYC++ Sbjct: 86 SVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQ 277
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.360e-54 Identity = 107/193 (55.44%), Postives = 132/193 (68.39%), Query Frame = 2 Query: 62 NSVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEISKT--NPYCTP--TPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYC 616 +SV+D+V+ FFDGI QA A+C GK FYTR AF+SA+ P+FG D KRE+AAFFAH++HETT+ C +EE + YC QYPCA GK YYGRGP+QL+ N NY AG+AIGFDGL +PE VA D SFK A+W+WM VHS +NQGFG T + ING EC GQN+ Q DR++ Y YC Sbjct: 85 SSVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYC 275
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.360e-54 Identity = 106/194 (54.64%), Postives = 130/194 (67.01%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSAL--NQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKR 622 SVA +VTPEFF + QA C KGFYTRDAF++A YP FGRT D+KRE+AAFFAH HET FC++EEI + YC T Q+PC GK YYGRGP+Q++ N NY AG++IGFDGL P+ VAR V++F+TALWYW VH A QGFG TIR ING EC G+N V +RV Y +C++ Sbjct: 67 SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQ 260
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.721e-49 Identity = 96/189 (50.79%), Postives = 124/189 (65.61%), Query Frame = 2 Query: 65 SVADLVTPEFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDTKREVAAFFAHVTHETTDFCFVEEIS-KTNPYCTPTP-QYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWMRYVHSALNQGFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 SV +VT FF+GI NQA C GK FYTRD+FI+A +++P F + T+RE+A FAH THET FC++EEI+ + YC QYPCA GK Y+GRGPIQL+ N NY G+++ + L PE V+ + ++F+T LW+WM V LNQGFG TIR ING EC G N V R+R Y DYC +L Sbjct: 71 SVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANSVTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQL 258
BLAST of FC868825 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 4.248e-40 Identity = 98/228 (42.98%), Postives = 127/228 (55.70%), Query Frame = 2 Query: 62 NSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD-------------FCFVEEISKTNP-YCTPTPQYPCANGKFYYGRGPIQLTGNGNYIDAGRAIGFDGLNSPETVARDRVISFKTALWYWM---------------RYVHSALNQ------GFGETIRKINGPAECGGQNRAQVQDRVRRYTDYCKRL 625 + VA +++P FD + ++ C KGFYT DAF++A ++YP+F T DT KREVAAF A +HETT +CF EE + P YC P P++PCA GK YYGRGPIQ+T N NY AG+AIG D LN+P+ VA D +SFKTA W+WM ++ SA +Q G+GE ING ECG +V DR+ Y YC L Sbjct: 74 SGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDML 301 The following BLAST results are available for this feature:
BLAST of FC868825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868825 ID=FC868825; Name=FC868825; organism=Citrus clementina; type=EST; length=638bpback to top |