FC868835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.299e-45 Identity = 105/168 (62.50%), Postives = 121/168 (72.02%), Query Frame = 1 Query: 187 MQGVVLNPT-YSR-PHQTLDSPSCSRPASKSTKSFFGERVS--LTRWRNPVRHSSCRLLLIRKRGAARRNVIKAVATPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELN 678 MQ + LNP SR P Q +D S S + +R + R NP+R R L R+ R V+KAVATPD +E+PLT EN+ESVLDEIRPYL+SDGGNVALHEIDGN+VR+KLQGACGSCPSS MTMKMGIERRLMEKIPEIVAVE++ DEETGLELN Sbjct: 1 MQLLTLNPAAISRTPPQAIDPSSSSSLLLPFPQILSSQRALGLVARPCNPLRRGLSRFLSSRQL-FRRSKVVKAVATPDPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEETGLELN 167
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.546e-35 Identity = 85/156 (54.49%), Postives = 107/156 (68.59%), Query Frame = 1 Query: 229 QTLDSPSCSRPA---SKSTKSFFGERVSLTRWRNPVRHSSCRLLLIRKRGAARRN-VIKAVA--TPDSAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEETGLELN 678 QT P + A S +T S +V+ W + SS L+ R V+ A+A P +A++LPLTA N+ESVLD++RPYL +DGG+VALHEI GNVVRLKLQGACGSCPSS++T+K GIERRLMEKIP++ AVE V D+ETGLELN Sbjct: 2 QTTTVPMAAAAAVAPSTTTSSSASFKVAAYAWSSCRSSSSPATRLVAAPNHQRPPLVVGAIAGLDPVTAVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPDVAAVEPVTDKETGLELN 157
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 424 LPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADEET-GLELN 678 +PLT EN+E VLDE+RP L++DGGNVALHEIDG VV LKLQGACGSCPSS MT+KMGIE RL +KIPEI++VE + ET GLELN Sbjct: 82 MPLTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSVEQFLESETGGLELN 167
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: YUTI_BACSU (Putative nitrogen fixation protein yutI OS=Bacillus subtilis GN=yutI PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17 Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 1 Query: 439 ENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 648 E ++ VLD++RP+L+ DGG+ L ++D +V+L+L GACGSCPSS +T+K GIER L+E++P +V VE V Sbjct: 41 EQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEEVPGVVEVEQV 110
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.161e-16 Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 1 Query: 412 SAIELPLTAENIESVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVA-VESVADEE 660 SA LT +N++ VL+++RP+LISDGGNV + ++ VV LKLQGAC SCPSS TM MGIER L EK + + + V DEE Sbjct: 79 SAQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEE 162
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NIFU_ANASL (Nitrogen fixation protein nifU (Fragment) OS=Anabaena sp. (strain L31) GN=nifU PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 38/69 (55.07%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 445 IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 648 I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSCPSS T+K+ IE RL ++I + VE+V Sbjct: 44 IQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRINPSLVVEAV 112
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NIFU_ANASP (Nitrogen fixation protein nifU OS=Anabaena sp. (strain PCC 7120) GN=nifU PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 391 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 648 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I + VE+V Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NIFU_ANAAZ (Nitrogen fixation protein nifU OS=Anabaena azollae GN=nifU PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.186e-14 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 391 KAVATPDSAIELPLTAEN----IESVLDE-IRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESV 648 K P+S + PLT I+ VLDE +RP LI+DGG+V L+++DG++V++ LQGACGSC SS T+K+ IE RL ++I + VE+V Sbjct: 210 KPTNIPNSGQKRPLTNVQKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESRLRDRINPSLVVEAV 300
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NFU1_DROWI (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila willistoni GN=GK25604 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1 Query: 433 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE 657 T I+ +LD IRP + DGG++ D VV+LK+QG+C SCPSS++T+K G++ L IPE+ +VE V DE Sbjct: 179 TVMMIKELLDTRIRPTVQEDGGDIVFMSYDNGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDE 254
BLAST of FC868835 vs. ExPASy Swiss-Prot
Match: NFU1_DROME (NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 35/76 (46.05%), Postives = 51/76 (67.11%), Query Frame = 1 Query: 433 TAENIESVLD-EIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVESVADE 657 T I+ +LD IRP + DGG++ +G VV+LK+QG+C SCPSS++T+K G++ L IPE+ +VE V DE Sbjct: 178 TVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPEVESVEQVFDE 253 The following BLAST results are available for this feature:
BLAST of FC868835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868835 ID=FC868835; Name=FC868835; organism=Citrus clementina; type=EST; length=679bpback to top |