FC868869

Overview
NameFC868869
Unique NameFC868869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length661
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11024 contig Ccv1_Contig11024:608..1268. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ANL2_ARATH (Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 4.454e-96
Identity = 168/220 (76.36%), Postives = 194/220 (88.18%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VSID +RE SG    +  RRLPSGCVVQD+ NGYSKVTWVEHAEYDE+Q+HQLY+PL+ SG+GFG+QRW+ATLQRQCECLAIL+S+SV++ D+T+IT GGR+SMLKLAQRMT NFC+G+ A +VH W+KL  GNVD DVRVMTRKSVDDPGEPPGIVLSAATSVWLP +PQRL++FLR+ER+R EWDILSNGGPMQEMAHI KGQD G  VSLLR
Sbjct:  462 WAVVDVSIDPVRENSGGAPVI--RRLPSGCVVQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSITPGGRKSMLKLAQRMTFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPGEPPGIVLSAATSVWLPAAPQRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQG--VSLLR 677          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG1_ARATH (Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana GN=HDG1 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 3.303e-91
Identity = 158/221 (71.49%), Postives = 189/221 (85.52%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTA-ITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VSID+IRE S +    +CRRLPSGC+VQDM NGYSKVTW+EH EYDE+ +H+LY+PL+  G+ FGA RW+A LQRQCECL ILMS++VS   + + I   GR+SMLKLA+RMTDNFC GVCAS++ KW+KLN GNVDEDVR+MTRKSV++PGEPPGI+L+AATSVW+PVSP+RLF+FL +ERLRSEWDILSNGGPM+EMAHIAKG D  N VSLLR
Sbjct:  459 WAVVDVSIDSIREGSSS----SCRRLPSGCLVQDMANGYSKVTWIEHTEYDENHIHRLYRPLLRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPINCNGRKSMLKLAKRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPGEPPGIILNAATSVWMPVSPRRLFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLR 675          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC5_ORYSJ (Homeobox-leucine zipper protein ROC5 OS=Oryza sativa subsp. japonica GN=ROC5 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.100e-86
Identity = 158/228 (69.30%), Postives = 190/228 (83.33%), Query Frame = 1
Query:    1 WAVVSVSID-TIRETSGAPA----FVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTS-VSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNA--GNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VSID  +R+ +   A     V CRR+PSGCV+QD PNGY KVTWVEH EYDE+ VHQLY+PL+ SG+ FGA+RW+ATLQRQCECLAILMS++ V+A D TAI+  G+RSMLKLA+RMT+NFCAGV AS+  +W+KL+   G++ EDVRVM RKSV +PGEPPG+VLSAATSVW+PV+P++LFNFLRDE+LR+EWDILSNGGPMQEM  IAKGQ  GN VSLLR
Sbjct:  458 WAVVDVSIDGLVRDHNSGTAPTGGNVKCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQCECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATGSIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGGPMQEMTQIAKGQRDGNSVSLLR 685          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC4_ORYSJ (Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 2.623e-80
Identity = 146/228 (64.04%), Postives = 177/228 (77.63%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSG-----APAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST-SVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNA--GNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VS D +    G     + A +NCRRLPSGCV+QD PNG+ KVTWVEH EYDE+ VH LY+PL+ SG+  GA RW+ATLQRQCECLA+LMS+ ++   D +AI   G+RSMLKLA+RMTDNFCAGV  S+  +W+KL    GN+ EDV VM RKSVD+PG PPG+VLSAATSVW+PV P+RLFNFL ++ LR+EWDILSNGGPMQE+  IAKGQ +GN V LL+
Sbjct:  468 WAVVDVSADELMRDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGLALGAGRWIATLQRQCECLALLMSSIALPENDSSAIHPEGKRSMLKLARRMTDNFCAGVSTSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSVWMPVMPERLFNFLHNKGLRAEWDILSNGGPMQEVTSIAKGQQNGNTVCLLK 695          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSI (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. indica GN=ROC7 PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 9.330e-78
Identity = 145/226 (64.16%), Postives = 174/226 (76.99%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSGA----PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI--TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VS+D +R  +G      A    RR PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE LA  M+++V++     +  T+ GRRSMLKLA+RM  +FC GV AST H+W  L+ G+  EDVRVMTRKSVDDPG PPGIVL+AATS WLPV P R+F+FLRD+  RSEWDILSNGG +QEMAHIA G+DHGN VSLLR
Sbjct:  404 WAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGDAGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTLS-GSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVSLLR 628          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSJ (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. japonica GN=ROC7 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.219e-77
Identity = 144/226 (63.72%), Postives = 174/226 (76.99%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSGA----PAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAI--TAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VS+D +R  +G      A    RR PSGC++Q+MPNGYSKVTWVEH E D+  VH LYKP++ SGM FGA+RWVATL+RQCE LA  M+++V++     +  T+ GRRSMLKLA+RM  +FC GV AST H+W  L+ G+  EDVRVMTRKSVDDPG PPGI+L+AATS WLPV P R+F+FLRD+  RSEWDILSNGG +QEMAHIA G+DHGN VSLLR
Sbjct:  404 WAVVDVSLDGLRAGAGGGCQPAAARGHRRRPSGCLIQEMPNGYSKVTWVEHVEADDQMVHNLYKPVVNSGMAFGARRWVATLERQCERLASAMASNVASSGDAGVITTSEGRRSMLKLAERMVASFCGGVTASTTHQWTTLS-GSGAEDVRVMTRKSVDDPGRPPGIILNAATSFWLPVPPSRVFDFLRDDSTRSEWDILSNGGVVQEMAHIANGRDHGNAVSLLR 628          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC2_ORYSJ (Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica GN=ROC2 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 6.048e-77
Identity = 141/221 (63.80%), Postives = 172/221 (77.83%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAG-GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VS+D++R +      + CRR PSGC++Q+MPNGYSKVTWVEH E D+  VH +YK L+ SG+ FGA+RWV TL RQCE LA +M++++   D   IT+  GR+SMLKLA+RM  +FC GV AS  H+W  L+ G+  EDVRVMTRKSVDDPG PPGIVL+AATS WLPV P+R+F+FLRDE  RSEWDILSNGG +QEMAHIA G+D GNCVSLLR
Sbjct:  441 WAVVDVSLDSLRPSP----VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLS-GSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLR 656          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC6_ORYSJ (Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica GN=ROC6 PE=2 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.032e-76
Identity = 145/241 (60.17%), Postives = 174/241 (72.20%), Query Frame = 1
Query:    1 WAVVSVSIDTIRET-------SGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLN-------------AGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLP-VSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VS+D +          S + +++ CR LP+GC+VQDM NGYSKVTWV HAEYDE+  HQLY+PL+ SG   GA+RW+A+LQRQC+ LAIL S S+ ARDH AIT  GRRSMLKLAQRMTDNFCAGVCAS   KW +L+              G+ ++ VR+M R SV  PGEPPG+VLSA TSV LP   PQR+F++LRDE+ R +WDIL+NG  MQEM HIAKGQ HGN VSLLR
Sbjct:  490 WAVVDVSVDAVLRPDQNGGGGSSSSSYMGCRLLPTGCIVQDMNNGYSKVTWVVHAEYDETAAHQLYRPLLRSGQALGARRWLASLQRQCQYLAILCSNSLPARDHAAITPVGRRSMLKLAQRMTDNFCAGVCASAAQKWRRLDEWRGEGGGGGGGGGGDGEDKVRMMARHSVGAPGEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHHGNAVSLLR 730          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: ROC1_ORYSJ (Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica GN=ROC1 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.032e-76
Identity = 142/221 (64.25%), Postives = 170/221 (76.92%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITA-GGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV VS+D++R +        CRR PSGC++Q+MPNGYSKVTWVEH E D+S VH +YKPL+ SG+ FGA+RWV TL RQCE LA  M++++   D   IT+  GR+SMLKLA+RM  +FC GV AS  H+W  L+ G+  EDVRVMTRKSVDDPG PPGIVL+AATS WLPV P  +F+FLRDE  RSEWDILSNGG +QEMAHIA G+DHGN VSLLR
Sbjct:  440 WAVVDVSLDSLRPSP----VQKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDSSVHNIYKPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSVEGRKSMLKLAERMVASFCGGVTASVAHQWTTLS-GSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPAAVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNSVSLLR 655          
BLAST of FC868869 vs. ExPASy Swiss-Prot
Match: HDG2_ARATH (Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana GN=HDG2 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.334e-75
Identity = 140/221 (63.35%), Postives = 170/221 (76.92%), Query Frame = 1
Query:    1 WAVVSVSIDTIRETSGAPAFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAIT-AGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLR 660
            WAVV +S+D+++    A     CRR  SGC++Q++PNGYSKVTWVEH E D+  VH LYK ++ +G  FGA+RWVA L RQCE LA +M+T++S+ +   IT   GRRSMLKLA+RM  +FCAGV AST H W  L+ G   EDVRVMTRKSVDDPG PPGIVLSAATS W+PV P+R+F+FLRDE  R+EWDILSNGG +QEMAHIA G+D GNCVSLLR
Sbjct:  386 WAVVDISLDSLQPNPPA----RCRRRASGCLIQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMATNISSGEVGVITNQEGRRSMLKLAERMVISFCAGVSASTAHTWTTLS-GTGAEDVRVMTRKSVDDPGRPPGIVLSAATSFWIPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLR 601          
The following BLAST results are available for this feature:
BLAST of FC868869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
ANL2_ARATH4.454e-9676.36Homeobox-leucine zipper protein ANTHOCYANINLESS 2 ... [more]
HDG1_ARATH3.303e-9171.49Homeobox-leucine zipper protein HDG1 OS=Arabidopsi... [more]
ROC5_ORYSJ1.100e-8669.30Homeobox-leucine zipper protein ROC5 OS=Oryza sati... [more]
ROC4_ORYSJ2.623e-8064.04Homeobox-leucine zipper protein ROC4 OS=Oryza sati... [more]
ROC7_ORYSI9.330e-7864.16Homeobox-leucine zipper protein ROC7 OS=Oryza sati... [more]
ROC7_ORYSJ1.219e-7763.72Homeobox-leucine zipper protein ROC7 OS=Oryza sati... [more]
ROC2_ORYSJ6.048e-7763.80Homeobox-leucine zipper protein ROC2 OS=Oryza sati... [more]
ROC6_ORYSJ1.032e-7660.17Homeobox-leucine zipper protein ROC6 OS=Oryza sati... [more]
ROC1_ORYSJ1.032e-7664.25Homeobox-leucine zipper protein ROC1 OS=Oryza sati... [more]
HDG2_ARATH4.334e-7563.35Homeobox-leucine zipper protein HDG2 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC31005G11EF AbioticL1 Citrus clementina cDNA clone C31005G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868869 ID=FC868869; Name=FC868869; organism=Citrus clementina; type=EST; length=661bp
TGGGCTGTCGTTTCTGTTTCCATTGACACCATCCGAGAAACTTCTGGTGC
TCCAGCTTTTGTTAATTGTAGGAGGCTTCCTTCTGGCTGTGTTGTGCAAG
ACATGCCTAATGGCTACTCAAAGGTGACATGGGTTGAGCATGCAGAATAC
GATGAAAGCCAAGTCCACCAACTCTACAAACCCTTGATAATCTCCGGAAT
GGGCTTCGGCGCCCAACGGTGGGTCGCCACCCTTCAAAGACAATGCGAGT
GCCTAGCCATTCTCATGTCCACCAGCGTCTCCGCCAGAGATCACACCGCA
ATAACTGCGGGTGGGCGACGAAGCATGTTGAAGCTAGCACAGAGAATGAC
TGATAATTTCTGCGCTGGGGTGTGCGCTTCAACTGTCCACAAATGGAACA
AGCTCAATGCTGGCAATGTCGATGAAGACGTTAGGGTTATGACCAGAAAG
AGCGTTGACGATCCCGGTGAGCCTCCAGGCATCGTGTTAAGCGCTGCCAC
CTCCGTTTGGCTGCCGGTGTCTCCTCAAAGACTCTTCAATTTTCTACGTG
ATGAGCGGCTTAGAAGCGAGTGGGATATTTTGTCGAACGGTGGGCCCATG
CAGGAGATGGCCCACATTGCTAAAGGACAAGATCACGGCAACTGCGTCTC
CCTTCTACGTG
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