FC868872

Overview
NameFC868872
Unique NameFC868872
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9412 contig Ccv1_Contig9412:1..722. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.602e-28
Identity = 56/112 (50.00%), Postives = 78/112 (69.64%), Query Frame = 1
Query:  352 HRNSIDKKPVPEPGGAWPLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRLHT 687
            +R +   K  P   GAWP++GHL LL G +  +  LG +A+K GP+F IKLGM  AL++SNWE++KE FTTND   S+R K +A E++ YN A  G +PYGPYWR++R++ T
Sbjct:   29 YRKNSRGKDAPVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVT 140          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.088e-28
Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = 1
Query:  373 KPVPEPGGAWPLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRL 681
            K  P  GGAWP+ GHL LL G K  +  LG +AEK GP+F IKLG  +AL+VS+WE+A+ECFTTND   S R K L  E++ YN AM   +PYGPYWR++R++
Sbjct:   38 KEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKI 140          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C82A1_PEA (Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 6.731e-27
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 1
Query:  373 KPVPEPGGAWPLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRLHT 687
            K  P   G+WPL+GHL L+   +  + TLG + +K GPIF IKLG   AL++SNWE+AKECFT ND V S+R K +A E++ YN A  G++PYG YWRQ+R++ T
Sbjct:   33 KEPPIISGSWPLLGHLPLMRNTQTPHKTLGALVDKYGPIFTIKLGATNALVLSNWELAKECFTKNDIVVSSRPKPVAVELMSYNQAFIGWAPYGAYWRQLRKIVT 137          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query:  382 PEPGGAWPLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRL 681
            P   GAWP+IGHL LL G K  + TLG++A+K GPIF IK+G   A++VSNWE+AKEC+TTND   S+    ++  +L YN +M   +PYGPYWRQ+R++
Sbjct:   38 PTVAGAWPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKI 137          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.031e-15
Identity = 44/112 (39.29%), Postives = 69/112 (61.61%), Query Frame = 1
Query:  346 RRHRNSIDKKPVPEPGGAWPLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRL 681
            +++ N+   K +P      P IG +H L G  P  V L ++AEK GP+  ++LG   A++V++ E+AK+   T+D  F++R K LA +I+ YN     FSPYG YWRQ+R++
Sbjct:   20 KKYLNNSQTKKLPPGPWKLPFIGGMHHLAGGLPHRV-LRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKI 130          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 45/111 (40.54%), Postives = 70/111 (63.06%), Query Frame = 1
Query:  355 RNSIDKKPVPEPGGAW--PLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRL 681
            +NS  KK  P P   W  P IG +H L G +P  V L ++A+K GP+  ++LG   A++V++ ++AKE   T+D  F++R K LA +I+ Y+     FSPYG YW+Q+R++
Sbjct:   24 KNSQTKKLPPGP---WKLPFIGSMHHLAGGRPHRV-LRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKI 130          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  388 PGGAW--PLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRL 681
            P G W  P+IG++H L G    +  L +++ K G +  +KLG    ++VS+ E AKE   T+D +F++R   LA EI+ Y++    F+PYG YWRQ+R++
Sbjct:   36 PPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKI 135          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14
Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 1
Query:  370 KKP--VPE-PGGAW--PLIGHL-HLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRL 681
            KKP  +P  P G W  P+IG + HL+G   P +  L ++A+K GP+  ++LG    +IVS+ E AKE   T+D  F++R ++L  +I+ Y     GFSPYG YWRQ+R++
Sbjct:   11 KKPDSIPNIPPGPWKLPIIGSIPHLVGS--PPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVFYGSTDIGFSPYGDYWRQVRKI 118          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 50/141 (35.46%), Postives = 74/141 (52.48%), Query Frame = 1
Query:  265 HVPFTPTVFITGXXXXXXXXXXXXXXSRRHRNSIDKKPVPEPGGAWPLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRLHT 687
            H PF+   FIT               S    +S  K P P P    PLIG++H + G  P +  L N+A+K GP+  +KLG    +IV++ E+A+E   T+D  FS+R   +   I+ YN +   FS +G YWRQ+R++ T
Sbjct:    8 HTPFS-IYFITSILFIFFVFFKLVQRSDSKTSSTCKLP-PGPR-TLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICT 145          
BLAST of FC868872 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 1
Query:  376 PVPEPGGAWPLIGHLHLLGGQKPAYVTLGNIAEKCGPIFMIKLGMHRALIVSNWEIAKECFTTNDKVFSNRIKALAPEILGYNYAMFGFSPYGPYWRQIRRL 681
            P P P   WP+IG+ H +  + P + TL N+AEK GPI  ++ G    ++VS+ E AK    T+D +F++R      +   YN+    FSPYG +WR++R++
Sbjct:   44 PGPYP---WPIIGNFHQV--RLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKI 140          
The following BLAST results are available for this feature:
BLAST of FC868872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
C82A3_SOYBN1.602e-2850.00Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]
C82A4_SOYBN6.088e-2855.34Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A1_PEA6.731e-2752.38Cytochrome P450 82A1 (Fragment) OS=Pisum sativum G... [more]
C82A2_SOYBN2.558e-2653.00Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71D7_SOLCH2.031e-1539.29Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71D6_SOLCH1.317e-1440.54Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71D9_SOYBN1.720e-1439.00Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71DB_LOTJA6.534e-1441.82Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71DA_SOYBN1.115e-1335.46Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C75A1_PINTA5.532e-1337.25Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]

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Properties
Property NameValue
Genbank descriptionC31005H03EF AbioticL1 Citrus clementina cDNA clone C31005H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868872 ID=FC868872; Name=FC868872; organism=Citrus clementina; type=EST; length=722bp
GCCCCGGGGAGGGATAAAAATAAACTTACTCTCTTTATCAATTTTGATTT
TGTGCACAAGTTTCCTCGTTCAATTTGCCAAGTCCAATTTTGTGTGCAAA
TATCATGTGCAATTAAATAGCTTTTTCCATTAGGTTATGTTTACTATCCC
AGAGACACCGATATAATTATCCTTGAATCGGGTTTACAGCTCATGTATTT
ATTTGATCCAACTTTCCTTCTACCACTTGGAACCTCGGAGAAAGTTTGGT
TAATGGACGGTACTCATGTTCCTTTCACACCAACTGTTTTTATTACTGGC
TTTTTCACTTTGTTTTTGCTTGTTTACTCTCTACTATGGTTATCAAGACG
GCACAGAAACTCAATCGACAAGAAACCGGTGCCGGAGCCTGGTGGTGCAT
GGCCTTTGATTGGTCACCTCCACCTGTTAGGGGGCCAAAAACCAGCTTAT
GTCACCTTGGGCAACATCGCCGAAAAGTGCGGTCCGATCTTCATGATCAA
GCTGGGTATGCATAGAGCTTTGATTGTTAGCAACTGGGAGATTGCTAAAG
AGTGCTTCACTACAAATGATAAAGTTTTTTCCAACCGCATAAAAGCTCTA
GCACCAGAGATCTTGGGCTACAACTACGCCATGTTTGGCTTCAGCCCTTA
CGGTCCTTACTGGCGCCAAATCCGCAGATTGCACACTGGAGGGTCTCTAA
ATCACGCCTGGAATGCTGAACA
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