FC868888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBRA_ARATH (Protein COBRA OS=Arabidopsis thaliana GN=COB PE=2 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 1.228e-113 Identity = 183/223 (82.06%), Postives = 198/223 (88.79%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNR---PMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLP 662 R T MMTWN+TCTYSQFLAQ+TPTCCVSLSSFYNETIV CPTCACGCQNN TESG+C++P TPHLASVV+ P K P+VQCT HMCPIRVHWHVK NYKEYWRVKITITNFNY +NY+ WNLV QHPN DN+TQ+FSF YKSLTPY GLNDTAMLWG+KFYNDFLSEAG GNVQSE+LFRKD STFTFEKGWAFPRRIYFNGDNCVMPPPD+YP+LP Sbjct: 208 RTTQAMMTWNITCTYSQFLAQRTPTCCVSLSSFYNETIVGCPTCACGCQNNRTESGACLDPDTPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHVKQNYKEYWRVKITITNFNYRLNYTQWNLVAQHPNLDNITQIFSFNYKSLTPYAGLNDTAMLWGVKFYNDFLSEAGPLGNVQSEILFRKDQSTFTFEKGWAFPRRIYFNGDNCVMPPPDSYPFLP 430
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL3_ORYSJ (COBRA-like protein 3 OS=Oryza sativa subsp. japonica GN=BC1L4 PE=2 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 1.717e-107 Identity = 170/226 (75.22%), Postives = 192/226 (84.96%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGK-PNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPY-EGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVP 674 R T +MTWNVTCTYSQFLAQKTP+CCVSLSSFYN+TIV+CPTC+CGCQNNGT GSC+N +P+L S ++ PGK +P+VQCTSHMCPIR+HWHVKLNYKEYWRVKITITNFNY MNY+ WNLV QHPNF+N+TQLFSF YK LTPY +NDTAM WG+KFYND L +AG GN QSELL RKD+ FTF+KGWAFP R+YFNGDNCVMPPPDAYPWLP P Sbjct: 208 RATQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNDTIVNCPTCSCGCQNNGTSPGSCVNENSPYLQSAIDGPGKWTGQPLVQCTSHMCPIRIHWHVKLNYKEYWRVKITITNFNYRMNYTQWNLVAQHPNFNNITQLFSFNYKPLTPYGSKINDTAMFWGVKFYNDLLMQAGPLGNAQSELLLRKDSKDFTFDKGWAFPHRVYFNGDNCVMPPPDAYPWLPNASP 433
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL1_ARATH (COBRA-like protein 1 OS=Arabidopsis thaliana GN=COBL1 PE=2 SV=1) HSP 1 Score: 387.497 bits (994), Expect = 3.825e-107 Identity = 171/222 (77.03%), Postives = 194/222 (87.39%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPNR--PMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLP 662 RVT +MTWNVTCTYSQFLAQKTPTCCVSLSSFYN+TIVSCPTC+CGC+N ++ G+C++PK P +ASV+ PGK P+VQCT HMCP+R+HWHVK+NYK+YWRVK+TITNFNY MNYS WNLVVQHPNFDNLTQ FSF YK LTPY +NDT +LWGIKFYND L +AG GNVQSELLF+K+AS FTFEKGWAFPRRIYFNGDNCVMPPPD+YPWLP Sbjct: 205 RVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNKTIVSCPTCSCGCRNT-SQPGNCVDPKGPRIASVIPNPGKNAYIPPLVQCTKHMCPVRIHWHVKVNYKQYWRVKVTITNFNYNMNYSQWNLVVQHPNFDNLTQTFSFNYKPLTPYASINDTGILWGIKFYNDLLMQAGPFGNVQSELLFQKEASAFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLP 425
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL1_ORYSJ (COBRA-like protein 1 OS=Oryza sativa subsp. japonica GN=BC1L6 PE=2 SV=1) HSP 1 Score: 379.793 bits (974), Expect = 7.975e-105 Identity = 169/221 (76.47%), Postives = 191/221 (86.43%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLP 662 R T MTWNVTCTYSQ +AQ++PTCCVSLSSFYN+TIV+CPTC+CGCQNN + GSC+ +P+LASVVNT K + P+VQCTSHMCPIRVHWHVK+NYKEYWRVKIT+TNFNY MNYS WNLV QHP+FDNLT +FSF YKSL PY +NDTAMLWGIK+YND L AG +GNVQSELLF+KD +FTFEKGWAFPRR+YFNGDNCVMPPPDAYPWLP Sbjct: 200 RTTQAHMTWNVTCTYSQIVAQRSPTCCVSLSSFYNDTIVNCPTCSCGCQNN--KPGSCVEGNSPYLASVVNTHNKDSLTPLVQCTSHMCPIRVHWHVKVNYKEYWRVKITVTNFNYRMNYSQWNLVTQHPSFDNLTTIFSFNYKSLNPYGVINDTAMLWGIKYYNDLLMTAGPDGNVQSELLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLP 418
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL2_ARATH (COBRA-like protein 2 OS=Arabidopsis thaliana GN=COBL2 PE=1 SV=2) HSP 1 Score: 375.555 bits (963), Expect = 1.504e-103 Identity = 170/230 (73.91%), Postives = 195/230 (84.78%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVPGLLFS 689 R T ++TWN+TCTYSQFLA+KTPTCCVSLS+FYNETIV CPTC+CGCQN+ +++G+C++PK +ASVV GK N P++QCT HMCPIRVHWHVK +YKEYWRVK+ ITNFNY MNYS WNLVVQHPNFDNLT+LFSF YK L PY +NDTAMLWGIKFYNDFLS+AG GNVQSELLF+K+ FTFEKGWAFPRRIYFNGDNCVMPPPD+YPWLP P + S Sbjct: 200 RKTQSLLTWNITCTYSQFLARKTPTCCVSLSAFYNETIVPCPTCSCGCQNS-SQAGTCVDPK---IASVVPALGKNNLEPLLQCTQHMCPIRVHWHVKTSYKEYWRVKVAITNFNYNMNYSQWNLVVQHPNFDNLTKLFSFNYKPLNPYLNINDTAMLWGIKFYNDFLSQAGPVGNVQSELLFQKNPLEFTFEKGWAFPRRIYFNGDNCVMPPPDSYPWLPNASPNIATS 425
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL2_ORYSJ (COBRA-like protein 2 OS=Oryza sativa subsp. japonica GN=BC1L2 PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 2.401e-101 Identity = 168/239 (70.29%), Postives = 198/239 (82.85%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASVVNTPGKPN-RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWL-PTQVPGLLFSTSFSIISW 713 R T +TWNVTCTYSQF+AQ+ PTCCVSLSSFYNETIV+CP CACGCQN + GSC+ +P+LASVVN PGK + P+VQCT HMCPIRVHWHVKLNY++YWRVK+TITN+NY MNYS WNLVVQHPNF+N++ +FSF YKSL PY +NDTAM+WG+K+YND L AG +GNVQSELLFRKD STFTF+KGWAFPRRIYFNG++CVMP PD YPWL P+ P F T F ++S+ Sbjct: 202 RTTQAHVTWNVTCTYSQFVAQRAPTCCVSLSSFYNETIVNCPKCACGCQNK--KPGSCVEGNSPYLASVVNGPGKGSLTPLVQCTPHMCPIRVHWHVKLNYRDYWRVKVTITNWNYRMNYSQWNLVVQHPNFENVSTVFSFNYKSLNPYGVINDTAMMWGVKYYNDLLMVAGPDGNVQSELLFRKDRSTFTFDKGWAFPRRIYFNGESCVMPSPDLYPWLPPSSTP--RFRTVFLLMSF 436
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL4_ARATH (COBRA-like protein 4 OS=Arabidopsis thaliana GN=COBL4 PE=2 SV=2) HSP 1 Score: 332.413 bits (851), Expect = 1.460e-90 Identity = 145/236 (61.44%), Postives = 181/236 (76.69%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNNGTESGSCINPKTPHLASV-VNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVPGLLFSTSFSII 707 R T +MTWNVTCTYSQFLA+K P+CCVS SSFYN+TI CP+CACGC+N SC+ + L +NTP K N P++QCT HMCP+RVHWHVK NYK+YWRVKI ITNFNY MN++LW L +QHPN +N+TQ+FSF YK ++PY +NDT M +G KFYND L EAG +GNVQSE+L +KD TFTF++GWAFPR++YFNGD C++PPPD+YP+LP G S S +I+ Sbjct: 192 RKTQALMTWNVTCTYSQFLARKHPSCCVSFSSFYNDTITPCPSCACGCENKK----SCVKADSKILTKKGLNTPKKDNTPLLQCTHHMCPVRVHWHVKTNYKDYWRVKIAITNFNYRMNHTLWTLAIQHPNLNNVTQVFSFDYKPVSPYGSINDTGMFYGTKFYNDLLMEAGPSGNVQSEVLLQKDQKTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSAQGNFASFSLTIL 423
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSJ (COBRA-like protein 5 OS=Oryza sativa subsp. japonica GN=BC1 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.019e-85 Identity = 148/253 (58.50%), Postives = 172/253 (67.98%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGC-----------------------QNNGTESG-----SCINPKTPH-LASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVP 674 R T +MTW VTCTYSQ LA + PTCCVS SSFYN TIV C CACGC +N+G G CI + L++ VNTP K P++QCTSHMCPIRVHWHVKLNYK+YWR KI ITNFNY MNY+ W LV QHPN +N+T++FSF YK L PY +NDT M +G+KFYND L EAG GNVQSE+L RKD +TFTF +GWAFPR+IYFNGD C MPPPD+YP+LP P Sbjct: 194 RRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSAP 446
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL5_ORYSI (COBRA-like protein 5 OS=Oryza sativa subsp. indica GN=BC1 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 7.019e-85 Identity = 148/253 (58.50%), Postives = 172/253 (67.98%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGC-----------------------QNNGTESG-----SCINPKTPH-LASVVNTPGKPNRPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVP 674 R T +MTW VTCTYSQ LA + PTCCVS SSFYN TIV C CACGC +N+G G CI + L++ VNTP K P++QCTSHMCPIRVHWHVKLNYK+YWR KI ITNFNY MNY+ W LV QHPN +N+T++FSF YK L PY +NDT M +G+KFYND L EAG GNVQSE+L RKD +TFTF +GWAFPR+IYFNGD C MPPPD+YP+LP P Sbjct: 194 RRTQALMTWTVTCTYSQQLASRYPTCCVSFSSFYNSTIVPCARCACGCGHDGYRGNGGGGKNARAGDGRSRRNSGGGGGHSGGTECIMGDSKRALSAGVNTPRKDGAPLLQCTSHMCPIRVHWHVKLNYKDYWRAKIAITNFNYRMNYTQWTLVAQHPNLNNVTEVFSFQYKPLLPYGNINDTGMFYGLKFYNDLLMEAGPFGNVQSEVLMRKDYNTFTFSQGWAFPRKIYFNGDECKMPPPDSYPYLPNSAP 446
BLAST of FC868888 vs. ExPASy Swiss-Prot
Match: COBL6_ORYSJ (COBRA-like protein 6 OS=Oryza sativa subsp. japonica GN=BC1L7 PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 3.261e-82 Identity = 138/237 (58.23%), Postives = 167/237 (70.46%), Query Frame = 3 Query: 3 RVTHPMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVSCPTCACGCQNN-----GTESGSCINPKTPHLASVVNTPGKPN--------RPMVQCTSHMCPIRVHWHVKLNYKEYWRVKITITNFNYAMNYSLWNLVVQHPNFDNLTQLFSFYYKSLTPYEGLNDTAMLWGIKFYNDFLSEAGSNGNVQSELLFRKDASTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPTQVP 674 R T +MTWNVTCTYSQ LA K P+CCVS SSFYN+TIV C CACGC + G + + N G+ N P++QCT+HMCP+RVHWHVKLNY+EYWR KITI NFNY MNY+ W LV QHPN DN+T++FSF YK + Y +NDTAM +G+K++ND L EAG +GNVQSE+L RKDA TFTF +GWAFPR++YFNGD C MPPPD+YP+LP P Sbjct: 193 RKTQALMTWNVTCTYSQHLASKYPSCCVSFSSFYNDTIVPCAKCACGCDAHKPCVRSERDGKRLAVTGKKHDANANAHGRGNGVAAAAMAAPLLQCTTHMCPVRVHWHVKLNYREYWRAKITIVNFNYRMNYTGWTLVAQHPNLDNITEVFSFDYKPVVSYGSINDTAMFYGLKYFNDQLMEAGPHGNVQSEVLMRKDARTFTFRQGWAFPRKVYFNGDECQMPPPDSYPYLPNAAP 429 The following BLAST results are available for this feature:
BLAST of FC868888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868888 ID=FC868888; Name=FC868888; organism=Citrus clementina; type=EST; length=719bpback to top |