FC868890

Overview
NameFC868890
Unique NameFC868890
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.277e-31
Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 2
Query:  182 NPEILSATISEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIKEKF-NARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            NP  L A +++++   Y+ Q +DHF +   +  TF QRY++  KYW    G+     I  Y G EG +    +  GF+ D A    A+LV+ EHRYYG+S+ FG  +   K+S  L +  S QA+ D+AE++ ++K     A + PVI IGGSYGGMLA WFR+KYPH+
Sbjct:   37 NPTSLPA-VAKNYSVLYFQQKVDHFGFN--TVKTFNQRYLVADKYWKKNGGS-----ILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFG--DNSFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHM 195          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.212e-30
Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 2
Query:  182 NPEILSATISEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIKEKF-NARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            NP  L A +++++   Y+ Q +DHF +   +  TF QRY++  KYW    G+     I  Y G EG +    +  GF+ D A    A+LV+ EHRYYG+S+ FG  +   K+S  L +  S QA+ D+AE++ ++K     A + PVI IGGSYGGMLA WFR+KYPH+
Sbjct:   37 NPTSLPA-VAKNYSVLYFQQKVDHFGFN--TVKTFNQRYLVADKYWKKNGGS-----ILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFG--DNTFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHM 195          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.026e-29
Identity = 71/195 (36.41%), Postives = 107/195 (54.87%), Query Frame = 2
Query:  104 VISSLQVSATRFNIPRLSPTRGTILQNPEILSATISEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIKEKF-NARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            ++S L + A     PRL       L         ++  +   Y+ Q +DHF +      TF+QRY++  K+W    G+     I  Y G EG +    +  GF+ D A    A+LV+ EHRYYG+S+ FG  ++  K+S  L +  S QA+ D+AE++ ++++    A+  PVI IGGSYGGMLA WFR+KYPH+
Sbjct:    8 LLSFLLLGAATTIPPRLKTLGSPHLSASPTPDPAVARKYSVLYFEQKVDHFGFA--DMRTFKQRYLVADKHWQRNGGS-----ILFYTGNEGDIVWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFG--QDSFKDSQHLNFLTSEQALADFAELIRHLEKTIPGAQGQPVIAIGGSYGGMLAAWFRMKYPHI 193          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: DPP2_RAT (Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28
Identity = 65/165 (39.39%), Postives = 96/165 (58.18%), Query Frame = 2
Query:  200 ATISEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGY---FNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            + +  DF+  Y+ Q +DHFN+   S  TF QR++++ K+W  G G     PIF Y G EG +    +  GF+ + AA+  ALLV+ EHRYYGKS+ FG +      S+  GY       QA+ D+A +L  ++     + +P I  GGSYGGML+ + R+KYPH+
Sbjct:   35 SVLDPDFRENYFEQYMDHFNFESFSNKTFGQRFLVSDKFWKMGEG-----PIFFYTGNEGDIWSLANNSGFIVELAAQQEALLVFAEHRYYGKSLPFGVQ------STQRGYTQLLTVEQALADFAVLLQALRHNLGVQDAPTIAFGGSYGGMLSAYMRMKYPHL 188          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 65/162 (40.12%), Postives = 95/162 (58.64%), Query Frame = 2
Query:  203 TISEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIKEKF-NARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            TI+  +   Y  Q +DHF +  +   TF+QRY+I   YW    G+     I  Y G EG +    +  GF+ D A    A+LV+ EHRYYG+S+ FG+  +   +S  L +  + QA+ D+A+++ Y+K     AR+  VI +GGSYGGMLA WFR+KYPH+
Sbjct:   45 TITLKYSIRYIQQKVDHFGFNIDR--TFKQRYLIADNYWKEDGGS-----ILFYTGNEGDIIWFCNNTGFMWDIAEEMKAMLVFAEHRYYGESLPFGA--DSFSDSRHLNFLTTEQALADFAKLIRYLKRTIPGARNQHVIALGGSYGGMLAAWFRMKYPHL 197          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: DPP2_MOUSE (Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 64/163 (39.26%), Postives = 93/163 (57.06%), Query Frame = 2
Query:  206 ISEDFQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGY---FNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            +  DF   Y+ Q +DHFN+      TF QR++++ K+W  G G     PIF Y G EG +    +  GF+ + AA+  ALLV+ EHRYYGKS+ FG +      S+  GY       QA+ D+A +L  +++      +P I  GGSYGGML+ + R+KYPH+
Sbjct:   37 LDPDFHENYFEQYMDHFNFESFGNKTFGQRFLVSDKFWKMGEG-----PIFFYTGNEGDIWSFANNSGFMVELAAQQEALLVFAEHRYYGKSLPFGVQ------STQRGYTQLLTVEQALADFAVLLQALRQDLGVHDAPTIAFGGSYGGMLSAYMRMKYPHL 188          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: DPP2_HUMAN (Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 3.648e-27
Identity = 62/156 (39.74%), Postives = 92/156 (58.97%), Query Frame = 2
Query:  218 FQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIKEKFNARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            FQ  ++ Q LDHFN+      TF QR++++ ++W  G G     PIF Y G EG +    +   F+ + AA   ALLV+ EHRYYGKS+ FG++     ++  L      QA+ D+AE+L  ++    A+ +P I  GGSYGGML+ + R+KYPH+
Sbjct:   31 FQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEG-----PIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELL---TVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHL 178          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: PCP1_CAEEL (Putative serine protease pcp-1 OS=Caenorhabditis elegans GN=pcp-1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 61/159 (38.36%), Postives = 87/159 (54.72%), Query Frame = 2
Query:  227 FYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIKEKFN------ARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            +Y N  LDHF +      TF  R + N  ++  G       PIF Y G EG L+  ++  G + D A  FNA +++ EHR+YG++  FG+  +   + + +GY  S QA+ DYAE+L  +K   N         + VI  GGSYGGML+ WFR KYPH+
Sbjct:   45 WYKNMKLDHFTWGDTR--TFDMRVMWNNTFYKPGG------PIFFYTGNEGGLESFVTATGMMFDLAPMFNASIIFAEHRFYGQTQPFGN--QSYASLANVGYLTSEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAWFRQKYPHI 193          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: PCP5_CAEEL (Prolyl carboxy peptidase like protein 5 OS=Caenorhabditis elegans GN=pcp-5 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  218 FQTFYYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIK-EKFN-ARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            ++  Y    +D F +  +    F  RY +N  ++  G       PI  Y G EG L+      GF+ D A    A +V++EHR+YGKS  F  + E   +   LGY +S QA+ D+A  + + K EK   A+ S VI  GGSYGGML+ WFR+KYPH+
Sbjct:   41 YEEGYLKAPIDPFAFTNDL--EFDLRYFLNIDHYETGG------PILFYTGNEGSLEAFAENTGFMWDLAPELKAAVVFVEHRFYGKSQPF--KNESYTDIRHLGYLSSQQALADFALSVQFFKNEKIKGAQKSAVIAFGGSYGGMLSAWFRIKYPHI 188          
BLAST of FC868890 vs. ExPASy Swiss-Prot
Match: TSSP_HUMAN (Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.624e-17
Identity = 57/153 (37.25%), Postives = 78/153 (50.98%), Query Frame = 2
Query:  230 YYNQTLDHFNYRPESYSTFQQRYVINFKYWGGGAGADANAPIFVYLGAEGPLDGDISIIGFLTDNAARFNALLVYIEHRYYGKSISFGSREEDLKNSSTLGYFNSAQAVTDYAEILLYIKEKFN-ARHSPVIVIGGSYGGMLATWFRLKYPHV 685
            +  Q LD FN       +F QRY +N ++W G  G     PIF++LG EG L     + G     A  + AL++ +EHR+YG SI  G  E      + L + +S  A+ D     L +   FN +  SP I  GGSY G LA W RLK+PH+
Sbjct:   61 WLEQLLDPFNVSDRR--SFLQRYWVNDQHWVGQDG-----PIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLE-----MAQLRFLSSRLALADVVSARLALSRLFNISSSSPWICFGGSYAGSLAAWARLKFPHL 201          
The following BLAST results are available for this feature:
BLAST of FC868890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PCP_HUMAN9.277e-3141.42Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
PCP_PONAB1.212e-3041.42Lysosomal Pro-X carboxypeptidase OS=Pongo abelii G... [more]
PCP_MOUSE1.026e-2936.41Lysosomal Pro-X carboxypeptidase OS=Mus musculus G... [more]
DPP2_RAT9.600e-2839.39Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp... [more]
PCP_BOVIN3.648e-2740.12Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=... [more]
DPP2_MOUSE3.648e-2739.26Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=... [more]
DPP2_HUMAN3.648e-2739.74Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=... [more]
PCP1_CAEEL4.174e-2338.36Putative serine protease pcp-1 OS=Caenorhabditis e... [more]
PCP5_CAEEL5.102e-2137.97Prolyl carboxy peptidase like protein 5 OS=Caenorh... [more]
TSSP_HUMAN7.624e-1737.25Thymus-specific serine protease OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionC31006B02EF AbioticL1 Citrus clementina cDNA clone C31006B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868890 ID=FC868890; Name=FC868890; organism=Citrus clementina; type=EST; length=690bp
GGGGGGGAACAATTAATTGAAGCTCATCAATATTCTTTTATCAAGTTCCA
ATACCATGCACTCTTCAATTGCTTCATTTCAATGGCTCCTATACATTTTC
ACGGTAATTTCCTCACTCCAAGTTTCTGCCACAAGGTTTAACATTCCAAG
GCTTAGTCCAACCAGAGGAACAATTTTACAAAACCCAGAAATTCTTTCAG
CAACAATTTCCGAAGATTTCCAAACATTTTACTACAACCAGACACTTGAT
CACTTCAACTACAGGCCTGAAAGCTACTCAACTTTCCAACAAAGATACGT
TATCAATTTCAAGTACTGGGGTGGCGGTGCAGGTGCTGATGCGAATGCAC
CAATCTTTGTATATCTCGGTGCTGAAGGGCCCTTAGACGGTGATATTTCT
ATCATCGGTTTCTTAACTGATAACGCCGCTCGATTCAATGCTCTCCTAGT
ATATATTGAGCATAGATACTATGGGAAATCAATTTCATTTGGGTCAAGAG
AAGAAGACTTGAAAAATTCAAGCACTCTTGGCTATTTCAACTCGGCACAA
GCTGTAACGGACTATGCGGAAATTCTCTTGTATATAAAGGAAAAATTTAA
TGCTAGGCATTCTCCGGTGATCGTCATCGGGGGATCATATGGAGGAATGC
TCGCTACATGGTTTCGTCTAAAATATCCGCATGTCGCCCT
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