FC868895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 4.833e-27 Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLD 549 D R+G MA+DA+V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + + D KT + EL++ GM LDRGY SPYFITN KT++C LD Sbjct: 145 DLRRGISMAVDAVVTNLKSKARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFN-ELEVVEGMKLDRGYTSPYFITNQKTQKCELD 246 HSP 2 Score: 39.6614 bits (91), Expect = 4.833e-27 Identity = 16/34 (47.06%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 576 VLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +LI++ED+E+D LA+L+LN + K C I PG Sbjct: 277 LLIVSEDVESDALATLILNKLRAGIKVCAIKAPG 310
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.066e-26 Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLD 549 D R+G MA+D++V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++D KT + EL++ GM LDRGY+SPYFITN K ++C LD Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDN-ELEVVEGMKLDRGYISPYFITNQKNQKCELD 247 HSP 2 Score: 38.1206 bits (87), Expect = 1.066e-26 Identity = 15/34 (44.12%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 576 VLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +LI++ED+E++ LA+L+LN + K C I PG Sbjct: 278 LLIVSEDVESEALATLILNKLRAGIKVCAIKAPG 311
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.066e-26 Identity = 54/103 (52.43%), Postives = 73/103 (70.87%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLD 549 D R+G MA+D++V NL S A+ I++ E+IA GT +ANG+R IGELIAKA EK + ++D KT + EL++ GM LDRGY+SPYFITN K ++C LD Sbjct: 146 DLRRGISMAVDSVVTNLKSRARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFN-ELEVVEGMKLDRGYISPYFITNQKNQKCELD 247 HSP 2 Score: 39.6614 bits (91), Expect = 1.066e-26 Identity = 16/34 (47.06%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 576 VLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +LI++ED+E+D LA+L+LN + K C I PG Sbjct: 278 LLIVSEDVESDALATLILNKLRAGIKVCAIKAPG 311
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.746e-26 Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLD 549 D R+G ++A+D +V NL S A+ I++ E+IA GT +ANGDR IGELIAKA E + + D KT + EL++ GM +DRGY+SPYFITN KT++C L+ Sbjct: 146 DLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNPKTQKCELE 247 HSP 2 Score: 39.6614 bits (91), Expect = 6.746e-26 Identity = 16/34 (47.06%), Postives = 24/34 (70.59%), Query Frame = 3 Query: 576 VLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +LI+AED+E+D LA+L+LN + K C + PG Sbjct: 278 LLIVAEDVESDALATLILNKLRANIKVCAVKAPG 311
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.472e-20 Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLDQ----LEDIMAQMY*SLLKILKM 606 D R+G MA+DA+V NL A+ I++ E+IA GT +ANG+R IGELIAKA EK + +AD T + EL++ GM LDRGY+SPYFITN KT++C L+ + D +++K+L+M Sbjct: 148 DLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKTQKCELEDPLILIHDKKVTNMHAVVKVLEM 272
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.593e-20 Identity = 57/126 (45.24%), Postives = 81/126 (64.29%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLDQ----LEDIMAQMY*SLLKILKM 606 D R+G MA+DA+V NL A+ I++ E+IA GT +ANG+R IGELIAKA EK + +AD T + EL++ GM LDRGY+SPYFITN K ++C L+ + D +++K+L+M Sbjct: 148 DLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTNMHAVVKVLEM 272
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH602_MESSB (60 kDa chaperonin 2 OS=Mesorhizobium sp. (strain BNC1) GN=groL2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.307e-19 Identity = 42/104 (40.38%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLDQ 552 D ++G A++A+V L A+ +T ++IA GT +ANGD+ IG +A+A EK + + + KT + EL++ GM DRGYLSPYFITN + LD+ Sbjct: 115 DLKRGIDKAVEAIVEELKKNARKVTKNDEIAQVGTISANGDQEIGRFLAQAMEKVGNEGVITVEEAKTAET-ELEVVEGMQFDRGYLSPYFITNQEKMRVELDE 217 HSP 2 Score: 35.8094 bits (81), Expect = 1.307e-19 Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 3 Query: 564 NGTDVLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +G +LIIAED+E + LA+LV+N + K + PG Sbjct: 243 SGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPG 280
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.207e-19 Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIA--KAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLD 549 D R+G ++A+D +V L S A+ I++ E+IA GT +ANGDR EL+ KA E + + D KT + EL++ GM +DRGY+SPYFITN K ++C L+ Sbjct: 149 DLRRGIKLAVDTVVTKLKSRARMISTSEEIAQVGTISANGDR---ELVTDCKAMESVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNQKNQKCELE 249 HSP 2 Score: 36.5798 bits (83), Expect = 2.207e-19 Identity = 15/34 (44.12%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 576 VLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +LI+A D+E+D LA L+LN + K C + PG Sbjct: 280 LLIVAADLESDALAVLILNKLRAGIKVCAVKAPG 313
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.210e-19 Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLD 549 D ++G A+ +V L + ++ I+S ++IA GT +AN D IGELIA+A EK G + + + EL++ GM DRGYLSPYF+TN T E LD Sbjct: 115 DLKRGIDRAVKEVVAELKAISRSISSKKEIAQVGTISANNDPEIGELIAEAMEK-VGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYFVTNSDTMEAELD 216 HSP 2 Score: 39.6614 bits (91), Expect = 2.210e-19 Identity = 18/38 (47.37%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 564 NGTDVLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +G +LIIAEDIE + LA+LV+N + K C + PG Sbjct: 243 SGRPLLIIAEDIEGEALATLVVNKLRGTLKVCAVKAPG 280
BLAST of FC868895 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-19 Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 241 DQRQGARMAIDALVGNLYSTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLADRKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECRLD 549 D ++G +A+DA+VG L + A+ I++ +IA GT +ANGD IG +A+A EK + + + KT + EL++ GM DRGYLSPYF+TN L+ Sbjct: 115 DLKRGIDLAVDAVVGELKANARKISNNSEIAQVGTISANGDAEIGRYLAEAMEKVGNEGVITVEEAKTAET-ELEVVEGMQFDRGYLSPYFVTNQDKMRVELE 216 HSP 2 Score: 35.4242 bits (80), Expect = 2.210e-19 Identity = 16/38 (42.11%), Postives = 24/38 (63.16%), Query Frame = 3 Query: 564 NGTDVLIIAEDIENDLLASLVLNGVATATKACVINLPG 677 +G +LIIAED+E + LA+LV+N + K + PG Sbjct: 243 SGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPG 280 The following BLAST results are available for this feature:
BLAST of FC868895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868895 ID=FC868895; Name=FC868895; organism=Citrus clementina; type=EST; length=684bpback to top |