FC868925
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2A_ARATH (Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis thaliana GN=RNR2A PE=1 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.156e-63 Identity = 114/136 (83.82%), Postives = 126/136 (92.65%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+LM QNQRF MFPIRYK +WEMYKKA+ASFWTAEEVDLS DVQ WE L DSEKHFISH+LAFFAASDGIVLENLAARFLND+Q+PEARAFYGFQIAMENIHSEMYSLLLET+ +DSKEK RLFNAIE IPC++++ Sbjct: 20 PLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKK 155
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2C_ARATH (Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis thaliana GN=TSO2 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.867e-54 Identity = 100/137 (72.99%), Postives = 117/137 (85.40%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLL-DSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L RFCMFPI Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L D E+HFI HVLAFFAASDGIVLENLA+RF++D+Q+ EARAFYGFQIA+ENIHSEMYSLLL+TY +D+KE+ LF AIE IPCVA++ Sbjct: 8 PLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDGERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVAKK 144
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2_TOBAC (Ribonucleoside-diphosphate reductase small chain OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.084e-53 Identity = 97/136 (71.32%), Postives = 113/136 (83.09%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L RFCMFPI+Y Q+WEMYKKA ASFWTAEEVDLS D +HWE L E+HFI+HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLE+Y +DS EK RLF A+E PCV ++ Sbjct: 8 PLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIKDSDEKSRLFRAVETNPCVEKK 143
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2B_ARATH (Putative ribonucleoside-diphosphate reductase small chain B OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.120e-53 Identity = 99/137 (72.26%), Postives = 116/137 (84.67%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWER-LLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 PIL RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD + WE L + E+HFI HVLAFFAASDGIVLENL+ RF++D+QI EARAFYGFQIA+ENIHSEMYSLLL+TY +D+KE+ LF AIE IPCV ++ Sbjct: 8 PILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCVTKK 144
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2_RAT (Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus norvegicus GN=Rrm2 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.671e-52 Identity = 94/136 (69.12%), Postives = 113/136 (83.09%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TY +DSKE+ LFNAIE +PCV ++ Sbjct: 72 PLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKK 207
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2_MESAU (Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus auratus GN=RRM2 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.488e-52 Identity = 94/136 (69.12%), Postives = 113/136 (83.09%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TY +DSKE+ LFNAIE +PCV ++ Sbjct: 72 PLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKK 207
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2_DANRE (Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio GN=rrm2 PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.770e-52 Identity = 93/136 (68.38%), Postives = 114/136 (83.82%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L E RF +FPI+Y +W+MYKKA+ASFWTAEEVDLS+D+QHW+ L D E++FISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TY +DSKE+ LFNAIE +PCV ++ Sbjct: 68 PLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKK 203
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2_MOUSE (Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus GN=Rrm2 PE=1 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51 Identity = 93/136 (68.38%), Postives = 112/136 (82.35%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E+HFISHVLAFFAASDGIV ENL RF ++Q+ EAR FYGFQIAMENIHSEMYSLL++TY +D KE+ LFNAIE +PCV ++ Sbjct: 72 PLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIETMPCVKKK 207
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2_MACFA (Ribonucleoside-diphosphate reductase subunit M2 OS=Macaca fascicularis GN=RRM2 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.037e-51 Identity = 93/136 (68.38%), Postives = 112/136 (82.35%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TY +D KE+ LFNAIE +PCV ++ Sbjct: 71 PLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVEKK 206
BLAST of FC868925 vs. ExPASy Swiss-Prot
Match: RIR2_HUMAN (Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens GN=RRM2 PE=1 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.037e-51 Identity = 93/136 (68.38%), Postives = 112/136 (82.35%), Query Frame = 2 Query: 287 PILMEQNQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLSQDVQHWERLLDSEKHFISHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYXQDSKEKHRLFNAIENIPCVAQR 694 P+L E +RF +FPI Y +W+MYKKA+ASFWTAEEVDLS+D+QHWE L E++FISHVLAFFAASDGIV ENL RF ++QI EAR FYGFQIAMENIHSEMYSLL++TY +D KE+ LFNAIE +PCV ++ Sbjct: 71 PLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKK 206 The following BLAST results are available for this feature:
BLAST of FC868925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868925 ID=FC868925; Name=FC868925; organism=Citrus clementina; type=EST; length=715bpback to top |