FC868931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6_SCHPO (Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe GN=taf6 PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.097e-38 Identity = 84/199 (42.21%), Postives = 123/199 (61.81%), Query Frame = 3 Query: 138 ETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRA---IGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-------------VQAIAAPSNGTNNEQKDGLP----VEIKLPVKHILSRELQLYFDKSLSLL 674 E+++ +A+ +GI N + + A A+A D+EYRI +++QEA K M HS+RT LT+ D+ AL+ NVEP+YGF + PL F A G L+YLDD++V+F+ +I APLP+ P + S HWLAIEGVQP IP+N + ++ E ++G+ VEIK V+H+LS+ELQLYF++ S L Sbjct: 9 ESIKDVAEMLGIGNLADEPAAAIAMDLEYRIHQVVQEATKFMVHSKRTVLTSADISSALRTLNVEPLYGFNNSRPLEFHEAAVGAGQNSLYYLDDEEVDFEKIINAPLPKVPRNISYSAHWLAIEGVQPAIPQNPTPSDHTVGEWASKGTSGVMPGASTAAKEARNGVTSMDNVEIKPLVRHVLSKELQLYFERITSAL 207
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6_YEAST (Transcription initiation factor TFIID subunit 6 OS=Saccharomyces cerevisiae GN=TAF6 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.837e-34 Identity = 83/222 (37.39%), Postives = 125/222 (56.31%), Query Frame = 3 Query: 132 PKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFR------RAIGYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPEN----------------------------APVQAIAAPSNGTN-------NEQKDGLPVEIKLPVKHILSRELQLYFDKSLSLL 674 P++TV+ +A+S+G+ N + D ALA DVEYRI EI+++A+K RHS+R LTTDDV +AL++ NVEP+YG+ G + G + ++YLD+++V+F +I PLP+ P + HWLA+EGVQP I +N PV + A ++ T+ + K G E+K VKH+LS+ELQ+YF+K +S L Sbjct: 13 PQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALRVLNVEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPAIIQNPNLNDIRVSQPPFIRGAIVTALNDNSLQTPVTSTTASASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFNKVISTL 234
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6_XENLA (Transcription initiation factor TFIID subunit 6 OS=Xenopus laevis GN=taf6 PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33 Identity = 82/208 (39.42%), Postives = 118/208 (56.73%), Query Frame = 3 Query: 123 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGY-RDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQA-------------IAAPSN-------------GTNNEQK----DGLPVEIKLPVKHILSRELQLYF 653 +++P E+++VI++S+GIS S + LA +V +RI+E+ Q+A+K M +R LT D+D ALKL+NVEP+YGF L FR A G R+L + ++K+ + D+I PLPR PLD S+ HWL+IEGVQP IPEN P +A P G E+K +G P+++K H LS E QLY+ Sbjct: 10 TLLPSESMKVISESVGISQMSEETCQLLAQEVSFRIKEVTQDALKFMHVGKRQKLTPSDIDAALKLKNVEPIYGFHPKEFLPFRYASGGGRELHFYEEKETDLSDIISTPLPRVPLDVSLKAHWLSIEGVQPAIPENPPPVPKEQQKTEATEPLKVAKPGQEEGLPGKGQGSGEGKGKEKKTAILEGAPLKLKPRSIHELSVEQQLYY 217
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6_RAT (Transcription initiation factor TFIID subunit 6 OS=Rattus norvegicus GN=Taf6 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33 Identity = 84/222 (37.84%), Postives = 124/222 (55.86%), Query Frame = 3 Query: 108 EEEKM----SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYF 653 EE+K+ +++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD + HWL+IEG QP IPEN P +A AA ++G E+K +G P +K H LS E QLY+ Sbjct: 3 EEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYY 224
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6_MOUSE (Transcription initiation factor TFIID subunit 6 OS=Mus musculus GN=Taf6 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33 Identity = 84/222 (37.84%), Postives = 124/222 (55.86%), Query Frame = 3 Query: 108 EEEKM----SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYF 653 EE+K+ +++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD + HWL+IEG QP IPEN P +A AA ++G E+K +G P +K H LS E QLY+ Sbjct: 3 EEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAAADGKGKEKKAPPLLEGAPFRLKPRSIHELSVEQQLYY 224
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6_HUMAN (Transcription initiation factor TFIID subunit 6 OS=Homo sapiens GN=TAF6 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.911e-33 Identity = 83/222 (37.39%), Postives = 124/222 (55.86%), Query Frame = 3 Query: 108 EEEKM----SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP--------VQAI----------------------AAPSNGTNNEQK-----DGLPVEIKLPVKHILSRELQLYF 653 EE+K+ +++P E+++V+A+S+GI+ + L +V YRI+EI Q+A+K M +R LTT D+D ALKL+NVEP+YGF + + FR A G R+L++ ++K+V+ D+I PLPR PLD + HWL+IEG QP IPEN P +A A ++G E+K +G P+ +K H LS E QLY+ Sbjct: 3 EEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYY 224
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6_DROME (Transcription initiation factor TFIID subunit 6 OS=Drosophila melanogaster GN=Taf6 PE=1 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.570e-28 Identity = 70/201 (34.83%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 123 SIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAI-GYRDLFYLDDKDVEFKDVIEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAP-----------------------VQAIAAPSNGTNNEQKDGLPVEIKLPVKHILSRELQLYF 653 S + E+++VIA+SIG+ + S DAA LA DV +++ I+Q+A K M H++R L+ D+D +LK+RNVEP YGF + + FR A G R+L + +DK+++ ++ + PLD ++ HW +EGVQP +PEN P A P+ G ++ K+ + +K H LS E QLY+ Sbjct: 19 SSISAESMKVIAESIGVGSLSDDAAKELAEDVSIKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLKVRNVEPQYGFVAKDFIPFRFASGGGRELHFTEDKEIDLGEITSTNSVKIPLDLTLRSHWFVVEGVQPTVPENPPPLSKDSQLLDSVNPVIKMDQGLNKDAAGKPTTGKIHKLKNVETIHVKQLATHELSVEQQLYY 219
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6L_MOUSE (TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Mus musculus GN=Taf6l PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 45/150 (30.00%), Postives = 86/150 (57.33%), Query Frame = 3 Query: 108 EEEKMSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 554 EE + +P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D + AL+ +VE V G+ S L R A DL++ +D++V ++ + +P+ +T++ H ++G + P+ + A+++ Sbjct: 5 EERRFVEIPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPA-REGDLYFPEDREVSLVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS 152
BLAST of FC868931 vs. ExPASy Swiss-Prot
Match: TAF6L_HUMAN (TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L OS=Homo sapiens GN=TAF6L PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.983e-13 Identity = 44/150 (29.33%), Postives = 86/150 (57.33%), Query Frame = 3 Query: 108 EEEKMSIVPKETVEVIAQSIGISNFSTDAALALAPDVEYRIREIMQEAIKCMRHSRRTTLTTDDVDEALKLRNVEPVYGFASGGPLRFRRAIGYRDLFYLDDKDVEFKDV-IEAPLPRAPLDTSIVCHWLAIEGVQPVIPENAPVQAIAA 554 EE + +P+E+V ++A+S G+ S + A LA DV YR+RE Q + + M+H++R LT +D + AL+ +VE V G+ S L R A +L++ +D++V ++ + +P+ +T++ H ++G + P+ + A+++ Sbjct: 5 EERRFVEIPRESVRLMAESTGLE-LSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPMRPA-REGELYFPEDREVNLVELALATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSS 152 The following BLAST results are available for this feature:
BLAST of FC868931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868931 ID=FC868931; Name=FC868931; organism=Citrus clementina; type=EST; length=697bpback to top |