FC868934

Overview
NameFC868934
Unique NameFC868934
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:570..1229. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 414.846 bits (1065), Expect = 1.923e-115
Identity = 200/220 (90.91%), Postives = 212/220 (96.36%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            G+N+ESW  GLDGLASR AAYYQQGARFAKWRTVVSIPNGPS LAVKEAAWGLARYAAI+QDNGLVPIVEPEILLDG+HGIDRTFEVA+KVWAE FFY+AENNVMFEGILLKPSMVTPGAECK++ATP+QV++YTLKLLHRRIPPAVPGIMFLSGGQSEVEAT NLNAMNQGPNPWHVSFSYARALQNTCLKTWGG+PENVKAAQD LL RAKANSLAQL
Sbjct:  146 GSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMAENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQL 365          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 402.905 bits (1034), Expect = 7.562e-112
Identity = 197/220 (89.55%), Postives = 209/220 (95.00%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            G+NDESW  GLDGLASR+AAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAI+QDNGLVPIVEPEILLDG+HGIDRTFEVA+KVWAEVF+YLAENNV FEGILLKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQL
Sbjct:  114 GSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQL 333          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 402.519 bits (1033), Expect = 9.877e-112
Identity = 195/220 (88.64%), Postives = 209/220 (95.00%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            G+N+ESW  GLDGL+SRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAI+QD+GLVPIVEPEILLDG+H IDRT++VA+KVWAEVFFYLA+NNVMFEGILLKPSMVTPGAE K++ATP+QVA YTLKLL  R+PPAVPGIMFLSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGGRPENV AAQ TLL RAKANSLAQL
Sbjct:  156 GSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEILLDGEHDIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAESKDRATPEQVAAYTLKLLRNRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGRPENVNAAQTTLLARAKANSLAQL 375          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 400.979 bits (1029), Expect = 2.874e-111
Identity = 196/220 (89.09%), Postives = 209/220 (95.00%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            G+N+ESW  GLDGLASR+AAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAI+QDNGLVPIVEPEILLDG+HGIDRTFEVA+KVWAEVF+YLAENNV FEGILLKPSMVTPGAE K+KA+P +VAEYTL LLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN+ PNPWHVSFSYARALQNT LKTWGG PENVKAAQ+ LL RAK+NSLAQL
Sbjct:  108 GSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFYYLAENNVQFEGILLKPSMVTPGAESKDKASPTKVAEYTLNLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNKSPNPWHVSFSYARALQNTALKTWGGLPENVKAAQEALLFRAKSNSLAQL 327          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 399.823 bits (1026), Expect = 6.402e-111
Identity = 194/220 (88.18%), Postives = 208/220 (94.55%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            G+ DESW  GLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAI+QD+GLVPIVEPEI+LDG+HGIDRT++VA+KVWAEVFFYLA+NNVMFEGILLKPSMVTPGAE  ++ATP+QVA YTLKLL  RIPPAVPGIMFLSGGQSE+EATLNLNAMNQ PNPWHVSFSYARALQNTCLKTWGG+ ENVKAAQD LL RAKANSLAQL
Sbjct:  157 GSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQAPNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQL 376          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 2.438e-102
Identity = 179/220 (81.36%), Postives = 201/220 (91.36%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            G+N+ESW  GLDGLASR+A YY+QGARFAKWRTVVS+P GPSALAVKEAAWGLARYAAI+QDNGLVPIVEPEILLDGDH I+RT EVA+KVW+EVFFYLA+NNVMFEGILLKPSMVTPGAE K KA+P+ VA++TL +L RR+PPAVPGIMFLSGGQSE EATLNLNAMNQ PNPWHVSFSYARALQN+ L+TW G+PE ++A+Q  LL RAKANSLAQL
Sbjct:  149 GSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVMFEGILLKPSMVTPGAEHKNKASPETVADFTLTMLKRRVPPAVPGIMFLSGGQSEAEATLNLNAMNQSPNPWHVSFSYARALQNSVLRTWQGKPEKIEASQKALLVRAKANSLAQL 368          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 343.969 bits (881), Expect = 4.169e-94
Identity = 176/220 (80.00%), Postives = 187/220 (85.00%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            G+NDESW  GLDGLA R+AAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAI QDNGL PI+EPEI+LDG+HGIDRTF VA++VWAEVFF LAENNV+ EG  LKPSMV PGA    K  P+QVA+Y LKLLHRR  P VPGIM LSGGQSEVEATLNLNAMNQ PNPWHVSFSYARALQNTCLKTW    ENVK AQD     AK+NSLAQL
Sbjct:  154 GSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAITQDNGLDPILEPEIMLDGEHGIDRTFRVAQQVWAEVFFNLAENNVLLEGSSLKPSMVGPGALSARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTCLKTWVEGQENVK-AQD--FACAKSNSLAQL 370          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.541e-75
Identity = 146/214 (68.22%), Postives = 168/214 (78.50%), Query Frame = 1
Query:   16 SWSTGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQ 657
            SW  GLDG  S  A YY+ GARFAKWR+VVSIP+GPS + +   A+GLARYAAIAQ+ GLVPIVEPE+LLDG+H IDR  EV + +WAE F Y+A+N VM +GILLKP+MVTPGA+CK KA P +VAEYTLK+L  R PP VPGIMFLSGGQSE+E+TLNLNAMNQ PNPWHVSFSYARAL NT LKTW   P  V+A +     R KANS AQ
Sbjct:  139 SWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPSIM-LPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVTPGADCKNKAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQSPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQ 348          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALF_SPIOL (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.273e-66
Identity = 133/223 (59.64%), Postives = 161/223 (72.20%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN--QGPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            GTN E+ + GLDGLA R A YY  GARFAKWR V+ I P  PS LA+ E A GLARY  I Q+NGLVPIVEPEIL+DG H IDR  EV+++V A  +  L +++V+ EG  LKP++VTPG+E K K TP+ +AEYT++ L R +P AVPG+MFLSGGQSE EATLNLNAMN  +   PW +SFSY RALQ + LK W G+ ENV  AQ+  L RAK NS A L
Sbjct:  113 GTNGETTTQGLDGLAQRCAQYYTAGARFAKWRAVLKIGPTEPSPLAILENANGLARYGIICQENGLVPIVEPEILVDGTHDIDRCAEVSERVLAACYKALNDHHVLLEGTSLKPNIVTPGSESK-KVTPEVIAEYTVRTLQRTVPQAVPGVMFLSGGQSEEEATLNLNAMNKLETKKPWTLSFSYGRALQQSTLKAWQGKEENVAKAQEVFLARAKGNSEATL 334          
BLAST of FC868934 vs. ExPASy Swiss-Prot
Match: ALF2_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.018e-64
Identity = 126/223 (56.50%), Postives = 165/223 (73.99%), Query Frame = 1
Query:    1 GTNDESWSTGLDGLASRTAAYYQQGARFAKWRTVVSI-PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGRPENVKAAQDTLLTRAKANSLAQL 660
            GT+ E+ + GLDGL +R   YY+ GARFAKWR V+ I  N PS  ++ E A+GLARYA I Q+NGLVPIVEPEIL+DG H I +   + ++V A  +  L++++V+ EG LLKP+MVTPG++   K  P+ +AE+T++ L R +P AVP ++FLSGGQSE EA++NLNA+NQ  G  PW +SFS+ RALQ + LK WGG+ ENVKAAQD LLTRAKANS A L
Sbjct:  114 GTDGETTTQGLDGLGARCRKYYEAGARFAKWRAVLKIGANEPSEHSIHENAYGLARYAVICQENGLVPIVEPEILVDGSHDILKCAAITERVLAATYKALSDHHVILEGTLLKPNMVTPGSDA-PKVAPEVIAEHTVRALQRTVPAAVPAVVFLSGGQSEEEASVNLNAINQIKGKKPWTLSFSFGRALQQSTLKAWGGKTENVKAAQDALLTRAKANSEATL 335          
The following BLAST results are available for this feature:
BLAST of FC868934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALFC_ORYSJ1.923e-11590.91Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_PEA7.562e-11289.55Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC2_ARATH9.877e-11288.64Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC2_PEA2.874e-11189.09Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC1_ARATH6.402e-11188.18Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC3_ARATH2.438e-10281.36Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_SPIOL4.169e-9480.00Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE2.541e-7568.22Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_SPIOL6.273e-6659.64Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF2_PEA2.018e-6456.50Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC31006F11EF AbioticL1 Citrus clementina cDNA clone C31006F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868934 ID=FC868934; Name=FC868934; organism=Citrus clementina; type=EST; length=660bp
GGTACCAATGATGAGTCATGGTCCACGGGTCTTGATGGCCTGGCTTCTCG
CACTGCTGCTTACTACCAACAGGGAGCTCGTTTCGCCAAATGGCGTACTG
TTGTGAGCATTCCCAATGGCCCATCTGCCTTGGCAGTCAAGGAAGCCGCC
TGGGGTCTTGCCCGCTATGCTGCCATTGCTCAAGACAACGGATTGGTCCC
AATTGTGGAGCCAGAAATCTTGCTTGATGGTGATCATGGCATTGACAGGA
CTTTTGAAGTAGCTAAGAAGGTTTGGGCTGAAGTTTTCTTCTACCTTGCT
GAGAACAATGTCATGTTTGAGGGTATTCTCCTCAAGCCTAGCATGGTCAC
TCCTGGTGCTGAATGCAAGGAGAAGGCCACACCACAACAGGTTGCTGAGT
ACACACTCAAGCTCCTTCACAGGAGAATCCCTCCAGCTGTCCCCGGAATC
ATGTTCTTGTCTGGTGGGCAATCTGAGGTTGAGGCAACCCTCAACTTGAA
CGCCATGAACCAAGGTCCCAACCCATGGCACGTATCTTTCTCTTATGCCA
GAGCTCTCCAAAACACCTGCCTGAAGACATGGGGTGGCAGGCCAGAGAAT
GTCAAGGCAGCTCAGGATACTCTGCTCACCCGTGCCAAGGCCAACTCACT
TGCTCAGCTC
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