FC868958

Overview
NameFC868958
Unique NameFC868958
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length719
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14668 contig Ccv1_Contig14668:192..910. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868958 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.497e-82
Identity = 148/190 (77.89%), Postives = 166/190 (87.37%), Query Frame = 1
Query:  148 GRVASVYSELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNPDEIAKLFPNLFGQPSALLVPNGADAVRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAEH 717
            GR ASVYSE+Q+SRI+H LPLPSVL +PFKIV GP SSAAGNPDEIAKLFPNLFGQPSA+LVP+ AD++ S+++LKIG+VLSGGQAPGGHNVISGI+DYLQDRAKGS+LYGFRGGPAGIMKC YV+LT+DYI+PYRNQGGFDMICSGRDKIETPEQFKQA ETA               SNTNACLLAE+
Sbjct:    7 GRAASVYSEVQSSRIEHVLPLPSVLNHPFKIVQGPPSSAAGNPDEIAKLFPNLFGQPSAMLVPDVADSLDSNQQLKIGLVLSGGQAPGGHNVISGIFDYLQDRAKGSILYGFRGGPAGIMKCNYVQLTADYIHPYRNQGGFDMICSGRDKIETPEQFKQAEETAGKLDLNGLVVIGGDDSNTNACLLAEN 196          
BLAST of FC868958 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 3.995e-72
Identity = 133/189 (70.37%), Postives = 152/189 (80.42%), Query Frame = 1
Query:  151 RVASVYSELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNPDEIAKLFPNLFGQPSALLVPNGADAVRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAEH 717
            R A+VYSE+Q SR+DH LPLPSVL +PFK+VDGP SSAAG+P+EIAKLFP+L+GQP   LVP+ +  V  ++ LKIGVVLSGGQAPGGHNVISGI+DYLQ   KGS +YGFRGGPAG+MK KYV LT ++IYPYRNQGGFDMICSGRDKIETPEQFKQA ETA               SNTNACLLAE+
Sbjct:    8 RYAAVYSEVQNSRLDHPLPLPSVLGSPFKVVDGPPSSAAGHPEEIAKLFPSLYGQPHVSLVPDDSGDVAMNQILKIGVVLSGGQAPGGHNVISGIFDYLQTHCKGSTMYGFRGGPAGVMKGKYVVLTPEFIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAEN 196          
BLAST of FC868958 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20
Identity = 64/191 (33.51%), Postives = 96/191 (50.26%), Query Frame = 1
Query:  169 SELQTSRIDHALPLPSVLKNPFKIVDGPASSAAGNP---DEIAKLFPNLFGQPSALL------VPNGADAVRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAE 714
            S+LQ  R  +   LP  L+     V+   ++ A +P     I + FP+ +GQP A        VP+ A  +     +++GV+  G Q+PGGHNVI G++D L+     ++L GF GG  G+   K +E+T D +  Y+NQGG+DM+   +D+I T EQ   A                   SNT+A  LAE
Sbjct:   12 SDLQKLRSHYHPELPPCLQGTTVRVELRDATTAADPAGEHTIKRFFPHTYGQPLAHFLRATAKVPD-AQIITEHPAIRVGVLFCGRQSPGGHNVIWGLHDALKVHNPKNILLGFLGGSEGLFAQKTLEITDDVLATYKNQGGYDMLGRTKDQIRTTEQVNAAMAACKALKLDGLVIIGGVTSNTDAAHLAE 201          
BLAST of FC868958 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20
Identity = 63/190 (33.16%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  169 SELQTSRIDHALPLPSVLKNP---FKIVDGPASSAAGNPDEIAKLFPNLFGQPSALLV---PNGADA--VRSDEKLKIGVVLSGGQAPGGHNVISGIYDYLQDRAKGSVLYGFRGGPAGIMKCKYVELTSDYIYPYRNQGGFDMICSGRDKIETPEQFKQATETAXXXXXXXXXXXXXXXSNTNACLLAE 714
            S+LQ  R  +   LP  L+      ++ DG  + +      I++ FP+ +GQP A  +      ADA  +     +++GVV  G Q+PGGHNV+ G+++ L+     S L GF GG  G+   K +E+T D +  Y+NQGG+D++   +D+I T EQ   A  T                SNT+A  LAE
Sbjct:   12 SDLQKLRSLYKPELPPCLQGTTVRVELGDGTTACSEAGAHTISRSFPHTYGQPLAHFLRATAKVADAHIISEHPAMRVGVVFCGRQSPGGHNVVWGLHNALKIHNPNSTLLGFLGGSEGLFAQKTLEVTDDILSTYKNQGGYDLLGRTKDQIRTTEQVHAALTTCKNLKLDGLVIIGGVTSNTDAAQLAE 201          
The following BLAST results are available for this feature:
BLAST of FC868958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PFPB_RICCO2.497e-8277.89Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_SOLTU3.995e-7270.37Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_SOLTU2.081e-2033.51Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_RICCO2.081e-2033.16Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionC31007A04EF AbioticL1 Citrus clementina cDNA clone C31007A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868958 ID=FC868958; Name=FC868958; organism=Citrus clementina; type=EST; length=719bp
GAGATGCGTTCTATCTTCTATGCTCACCGTCACAGTAACACTCCCTACTA
GACACAGTTTGGTAATAAACTCGATAGATTAGAAACAATGTCTCCGTCCT
TGGTGGCAAACGCCGACCTCAGTCCCGTCACGTCCGGTACCGTTAAGGGA
CGCGTGGCTTCAGTTTATAGCGAACTCCAAACGAGTCGAATCGATCACGC
ACTCCCTCTCCCTTCTGTTCTCAAAAACCCTTTCAAAATCGTCGATGGCC
CCGCTAGCTCCGCCGCCGGCAATCCAGATGAGATTGCGAAATTGTTTCCA
AATCTGTTCGGGCAACCGTCCGCATTGTTGGTGCCGAACGGTGCTGACGC
GGTGCGATCTGATGAGAAGTTGAAAATCGGCGTCGTCTTGTCTGGAGGTC
AGGCGCCAGGTGGACACAATGTGATCTCTGGAATCTATGATTACTTGCAG
GATCGCGCGAAAGGGAGTGTACTGTATGGATTCAGAGGAGGTCCAGCTGG
AATCATGAAGTGCAAATACGTTGAACTAACTTCCGATTATATTTATCCCT
ATAGAAACCAGGGTGGCTTTGATATGATCTGTAGTGGGAGAGACAAGATC
GAAACCCCAGAGCAGTTTAAACAAGCTACAGAAACAGCAGTGAAGCTTGA
TTTGGACGGCCTTGTCGTTATTGGTGGTGATGATTCAAATACAAATGCTT
GCCTCCTTGCTGAACACTT
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