FC868960

Overview
NameFC868960
Unique NameFC868960
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9429 contig Ccv1_Contig9429:1..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22
Identity = 66/168 (39.29%), Postives = 90/168 (53.57%), Query Frame = 2
Query:  122 VGFRFYPTDEQII-LLLTMKRRDPAGFSV-RTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKY-KTEVIGTKKILSFSRDDAAAEKDKTEWVIHEI-AVENSPDFEKDFVVCRLERKREKKTLGVVSTKRKREK 613
            VGFRF P DE+I+   L  K  D     V   I  +D+ SFEPW+LP  S I+S + VWYFF     K     + RRRT  G+WKKTG+   + RK    E IG K++L F   D +    KT+WV+HE  A    P+    + VC++E K E+  +   ST  + E+
Sbjct:    5 VGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVFKNRDGS----KTDWVMHEYHATSLFPNQMMTYTVCKVEFKGEETEISSSSTGSEIEQ 168          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.951e-21
Identity = 59/165 (35.76%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  110 MDSLVGFRFYPTDEQII-LLLTMKRRDPAGFSV-RTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKY-KTEVIGTKKILSFSRDDAAAEKDKTEWVIHEI-AVENSPDFEKDFVVCRLERKREKKTLGVVS 592
            M + VGFRF PTD +I+ + L  K  +     V   I  +D+ SF+PW+LP HS +++ ++VWYFF     K  +  R  R+TK G+WKKTG   +I RK    E IG K++L F     +    K++W +HE  A  +SP+    + +C+++ K E++   V +
Sbjct:    1 MANPVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVFKNHGGS----KSDWAMHEYHATFSSPNQIMTYTLCKVKFKGERREFSVAT 161          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.685e-20
Identity = 57/151 (37.75%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEV-WYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV---ENSPDFEKDFVVCRLERKR 565
            GFRF+PTDE+++     K+       +  IK+IDLY  EPW+L    +I  EE+  WYFF     K     R  R TK G+WK TGR   I  ++   +IG +K L F +   A    K++W++HE  +   EN    E+ +VVCR+ +KR
Sbjct:   10 GFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRH--SLIGMRKTLVFYK-GRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKR 157          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.236e-19
Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = 2
Query:   98 NQKPMDSLV-GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAV----ENSPDFEKDF----------VVCRLERKREKKTLGVVS 592
            +QK  D L+ GFRF+PTDE+++     ++      S+  I+++D+Y ++PW+LP  +   + E+ WYF+C    K   S R  R T  G+WK TG    I      + IG KK L F +   AA+  KT+W++HE  +    E SP  ++ F           +CR+ +K    TL  +S
Sbjct:    9 DQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFA--MTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYK-GRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLRALS 185          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 57/152 (37.50%), Postives = 83/152 (54.61%), Query Frame = 2
Query:  119 LVGFRFYPTDEQIIL-LLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTE-VIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEKDFVVCRLERKRE 568
            LVG+RFYPT E++I   L  K           I EI++ S++P  LP  S+I+S++ VWYFFC   Y +A+ K  +R T  GYWK TG    IK K      IG KK L +  +    +   T WV+HE  +   P  ++++V+C++  K E
Sbjct:    5 LVGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVY-YEGRVPKGVWTPWVMHEYHITCLPQDQRNYVICQVMYKGE 155          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19
Identity = 49/153 (32.03%), Postives = 77/153 (50.33%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVEN-----SPDFEKDFVVCRLERKRE 568
            GF F+P D ++I     K+          I E+D+Y  EPW+LP   ++ +++  W+FF     K     R  R T  GYWK TG+   IK   +T  IGTKK L F        + +TEW++HE  ++       PD +  +V+CR+ ++ +
Sbjct:   12 GFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQT--IGTKKTLVFHEGRPPTGR-RTEWIMHEYYIDERECQACPDMKDAYVLCRITKRND 161          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19
Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVEN-------SPDFEKDFVVCRLERKREKKTLGVVS 592
            GFRF+PTDE++I    +++     FS R I E+DL   EPW+LP  +++  +E  WYFF     K     R  R T+ GYWK TG+   I       ++G KK L F +   A + +K+ WV+HE  +E        S   + ++V+ R+ +K    + G VS
Sbjct:   20 GFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE--WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYK-GRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVS 179          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVEN-------SPDFEKDFVVCRL 553
            GFRF+PTDE++I    +K+   + FS   I ++DL   EPWELP   + +  E+ WYFF     K     R  R T+ GYWK TG+   IK      ++G KK L F +   A + +K+ WV+HE  ++        S   + ++V+C++
Sbjct:   23 GFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELP--EKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYK-GRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKV 169          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 50/152 (32.89%), Postives = 82/152 (53.95%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDFEK------DFVVCRLERK 562
            GFRF+PTDE+++     ++     F    I   D+Y  EPW+LP  S+++S +  WYFF     K +   +  R T++GYWK TG+   I+    + V+G KK L + +   A   ++T WV+HE  + +  D +K       +V+CR+ +K
Sbjct:   12 GFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRN--GSRVVGMKKTLVYHK-GRAPRGERTNWVMHEYRLSDE-DLKKAGVPQEAYVLCRIFQK 159          
BLAST of FC868960 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.229e-18
Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = 2
Query:  125 GFRFYPTDEQIILLLTMKRRDPAGFSVRTIKEIDLYSFEPWELPCHSEIQSEEEVWYFFCEPCYKNAESKRVRRRTKEGYWKKTGRGSNIKRKYKTEVIGTKKILSFSRDDAAAEKDKTEWVIHEIAVENSPDF----EKDFVVCRLERKR-EKKTLGVV 589
            GFRF+PTDE++I      +    G S   I E+DL   EPWELP  +++   E  WYF+     K     R  R T  GYWK TG+   +      +++G KK L F +   A    KT+WV+HE  +EN        ++++V+CR+  K  ++K +G++
Sbjct:   25 GFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGERE--WYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYK-GRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNVGLI 181          
The following BLAST results are available for this feature:
BLAST of FC868960 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
NAC4_ARATH2.822e-2239.29NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC5_ARATH6.951e-2135.76NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC7_ARATH7.685e-2037.75NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC9_ARATH2.236e-1932.78Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC69_ARATH2.920e-1937.50NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC74_ORYSJ6.506e-1932.03NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC98_ARATH8.497e-1934.36Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC54_ARATH1.449e-1834.67Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC78_ARATH3.229e-1832.89NAC domain-containing protein 78 OS=Arabidopsis th... [more]
NAC31_ARATH3.229e-1834.38Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC31007A07EF AbioticL1 Citrus clementina cDNA clone C31007A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868960 ID=FC868960; Name=FC868960; organism=Citrus clementina; type=EST; length=703bp
ATAGCCCACTGGCTCTTTTAATCTTTTGCTGACCAAATTGGAAAGAAGAA
GCTCTTACTCTCTCATTCTTGTTCTACGTTTCTCCTGCTGGGTGTTGAAT
CAGAAACCAATGGACAGTCTCGTGGGGTTCAGATTCTATCCAACTGATGA
ACAAATTATTCTTCTACTGACGATGAAGAGACGTGACCCTGCAGGTTTCT
CCGTCCGTACGATCAAGGAAATCGATCTCTACAGCTTTGAGCCCTGGGAG
CTACCCTGCCATTCTGAGATTCAGTCTGAGGAAGAAGTGTGGTACTTTTT
CTGTGAACCTTGTTACAAAAATGCCGAGAGTAAACGGGTACGTAGAAGAA
CAAAGGAAGGCTATTGGAAAAAGACTGGCAGAGGTTCTAACATCAAGCGC
AAATACAAAACTGAGGTGATTGGTACGAAGAAGATTTTGTCTTTTTCCCG
CGATGATGCTGCTGCCGAGAAAGATAAGACTGAGTGGGTTATACACGAGA
TAGCTGTTGAAAATAGCCCTGACTTTGAGAAGGATTTTGTTGTGTGTCGC
CTTGAAAGAAAACGGGAGAAGAAGACGCTTGGTGTTGTTTCCACTAAGAG
AAAACGGGAGAAGAAGACGCTTGGTGTTGTTTCCACTAAGAGAAAGCGGG
AGAAGAAGCTTGGTGTTTCACCAGCGATGGTGATCATCTTTGTCAATTTA
CTT
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