FC868988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868988 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 1 Query: 247 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNG-DDCKNK---KKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLS 609 +FL VP +++ ++ V + DV I++++ L R+Y P + D +N + +P+I+ FHGG F S A+ +Y + +L A+ VSV RRAPE+R P A+DDG+ L W+ S S Sbjct: 47 EFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSSS 171
BLAST of FC868988 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 50/149 (33.56%), Postives = 70/149 (46.98%), Query Frame = 1 Query: 247 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGD-----------------DCKNKKKLPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRS----LSLAQAQAR 630 ++L VP ++ ++ V++ D I++ GL VRIY GD D + P+I+ FHGG F S A +Y + + K + VSV RRAPEHR P A+DDG+ AL W+ S S AQAR Sbjct: 47 EYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAA----EGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQAR 191
BLAST of FC868988 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 1 Query: 205 DGSVDRTWTGPPEVKFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK-------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRS 603 DGS +R +FL VP +S +D V + D ++ + L RIY P + K +P+++ FHGG F S A+ +Y +L + VSV RR+PEHR P A+DDG+ AL W++S Sbjct: 38 DGSFNRDLA-----EFLDRKVPANSFPLDGVFSFD-HVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKS 171
BLAST of FC868988 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 42/127 (33.07%), Postives = 66/127 (51.97%), Query Frame = 1 Query: 247 KFLSEPVPPHSDFIDSVATHDVTINKESGLRVRIYSPEEIKKLNGDDCKNKKK------LPIILHFHGGGFCVSQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLS 609 ++L V +++ +D V + DV I++ L R+Y P + + +K +P+IL FHGG F S A+ +Y + +L + VSV RRAPE+ P A+DDG+ AL W+ S S Sbjct: 47 EYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS 173 The following BLAST results are available for this feature:
BLAST of FC868988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868988 ID=FC868988; Name=FC868988; organism=Citrus clementina; type=EST; length=679bpback to top |