FC869008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_ARATH (Porphobilinogen deaminase, chloroplastic OS=Arabidopsis thaliana GN=HEMC PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.192e-58 Identity = 121/172 (70.35%), Postives = 134/172 (77.91%), Query Frame = 2 Query: 197 CYPGSVSLVGFSSPRLKTPSFPKSLKKRSF-GLVRASAAVE--TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 C GSVS +GFS P++ +P+ K +K+S G V+A AVE T+ AIIRIGTRGSPLALAQA+ETR KL HPEL ++GAI I IIKTTGDKILSQPLADIGGKGLFTKEIDEALIN IDIAVHSMKDVPTYLPEKTILPCNL REDVRDAFI PA S+V Sbjct: 27 CSLGSVSAIGFSLPQISSPALGKCRRKQSSSGFVKACVAVEQKTRTAIIRIGTRGSPLALAQAYETREKLKKKHPELVEDGAIHIEIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGHIDIAVHSMKDVPTYLPEKTILPCNLPREDVRDAFICLTAATLAELPAGSVV 198
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_PEA (Porphobilinogen deaminase, chloroplastic OS=Pisum sativum GN=HEMC PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.062e-53 Identity = 111/142 (78.17%), Postives = 118/142 (83.10%), Query Frame = 2 Query: 293 VRASAAVE-----TKVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 +RAS AVE K A+IRIGTRGSPLALAQAHETR+KLMA H ELA+EGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALIN IDIAVHSMKDVPTYLPE+TILPCNL REDVRDAFI PA S++ Sbjct: 44 IRASLAVEQQTQQNKTALIRIGTRGSPLALAQAHETRDKLMASHTELAEEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINGDIDIAVHSMKDVPTYLPEETILPCNLPREDVRDAFISLSAASLADLPAGSVI 185
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_ORYSJ (Porphobilinogen deaminase, chloroplastic OS=Oryza sativa subsp. japonica GN=HEMC PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.074e-49 Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 2 Query: 293 VRASAAVET----KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 VRA+ AV+ KV++IRIGTRGSPLALAQAHETR+KL A H ELA+EGA++IVIIKTTGD IL +PLADIGGKGLFTKEID+AL+ +IDIAVHSMKDVPTYLPE TILPCNL REDVRDAFI PA S+V Sbjct: 33 VRAAVAVQAEAQAKVSLIRIGTRGSPLALAQAHETRDKLKAAHSELAEEGAVEIVIIKTTGDMILDKPLADIGGKGLFTKEIDDALLQGRIDIAVHSMKDVPTYLPEGTILPCNLPREDVRDAFICLTASSLAELPAGSVV 173
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_PARDP (Porphobilinogen deaminase OS=Paracoccus denitrificans (strain Pd 1222) GN=hemC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.083e-33 Identity = 73/124 (58.87%), Postives = 92/124 (74.19%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IRIGTRGS LALAQAHETR++LMA H A A +IV+IKTTGD++L +PL +IGGKGLFT+EI++AL+ +IDIAVHSMKD+PT PE ++ C L REDVRDAF+ P ++V Sbjct: 11 IRIGTRGSALALAQAHETRDRLMAAHGLAAD--AFRIVVIKTTGDRVLDRPLKEIGGKGLFTREIEDALLAHEIDIAVHSMKDMPTIQPEGLVIDCYLPREDVRDAFVSAQFAAISELPQGAVV 132
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_NITWN (Porphobilinogen deaminase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=hemC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 71/122 (58.20%), Postives = 84/122 (68.85%), Query Frame = 2 Query: 338 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IGTRGSPLALAQAHE R++L H ++A E I I I+T+GD I +PL D+GGKGLFTKEI+EAL+ ID AVHS KDVPT+LP+ T LP L REDVRD FI PA + V Sbjct: 13 IGTRGSPLALAQAHEVRDRLARAH-QVAPE-RIAIKTIRTSGDAIQDRPLFDVGGKGLFTKEIEEALLAGTIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDVFISPHAGSLNDLPAGATV 132
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_RHILO (Porphobilinogen deaminase OS=Rhizobium loti GN=hemC PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 2 Query: 332 IRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 ++IGTRGSPLALAQAHET+ +LMA H A+ A ++V+I T+GD+I +PL++ GGKGLFTKEI+EAL+ IDIAVHS KD+PT LP+ L L RED RDAF+ Sbjct: 5 LKIGTRGSPLALAQAHETQARLMAAHGLPAE--AFEVVVISTSGDRIQDRPLSEAGGKGLFTKEIEEALLAGAIDIAVHSSKDMPTQLPDGLELSAFLPREDARDAFV 110
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_NITHX (Porphobilinogen deaminase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=hemC PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 72/122 (59.02%), Postives = 85/122 (69.67%), Query Frame = 2 Query: 338 IGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 IGTRGS LALAQA+E R++L H ++A E I I I+T+GD I +PL D+GGKGLFTKEI+EAL+ ID AVHS KDVPT+LP+ T LP L REDVRDAFI PA SIV Sbjct: 13 IGTRGSALALAQANEVRDRLARAH-QVAPE-RIVIKTIRTSGDAIQDRPLFDVGGKGLFTKEIEEALLAGSIDFAVHSSKDVPTFLPDATWLPAFLPREDVRDAFISPRAASLNDLPAGSIV 132
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_AGRT5 (Porphobilinogen deaminase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=hemC PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.231e-27 Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = 2 Query: 335 RIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFIXXXXXXXXXXPARSIV 703 RIGTRGSPLALAQA+ETR++LMA H E +IV++ T GD+I + L++IGGKGLFT+E++ L++ ++DIAVHS KD+PT LPE L L RED+RDAFI P ++V Sbjct: 7 RIGTRGSPLALAQAYETRSRLMAAHG--LPEEMFEIVVLSTKGDRITDRALSEIGGKGLFTEELENQLLSGELDIAVHSSKDMPTVLPEGLHLSAFLPREDMRDAFIGRTAPKLLELPQGAVV 127
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_RHIME (Porphobilinogen deaminase OS=Rhizobium meliloti GN=hemC PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26 Identity = 61/110 (55.45%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 335 RIGTRGSPLALAQAHETRNKLMALH---PELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 RIGTRGSPLA+AQ HETR++L A H PE+ +IVI+ T GD+I + LA+IGGKGLFT+E+++ L++ +D AVHS KD+PT LPE L L RED+RDAF+ Sbjct: 7 RIGTRGSPLAMAQTHETRDRLAAAHGLPPEM-----FEIVILSTKGDRITDRSLAEIGGKGLFTEELEQQLLSGDLDFAVHSSKDMPTKLPEGLFLSAFLPREDIRDAFV 111
BLAST of FC869008 vs. ExPASy Swiss-Prot
Match: HEM3_OCHA4 (Porphobilinogen deaminase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=hemC PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.373e-26 Identity = 62/112 (55.36%), Postives = 82/112 (73.21%), Query Frame = 2 Query: 320 KVAIIRIGTRGSPLALAQAHETRNKLMALHPELAQEGAIQIVIIKTTGDKILSQPLADIGGKGLFTKEIDEALINSQIDIAVHSMKDVPTYLPEKTILPCNLQREDVRDAFI 655 K ++IGTRGS LALAQA+ETR +LM H E AI+I+ + T GD+I + L++IGGKGLFT+EI++AL + +ID+AVHS KD+PT LP+ L L+RED RDAFI Sbjct: 7 KNGTLKIGTRGSKLALAQAYETRRRLMEAHG--LPEEAIEIIPMSTAGDRIQDRALSEIGGKGLFTEEIEQALTDGRIDLAVHSTKDMPTVLPDGLHLSVFLEREDPRDAFI 116 The following BLAST results are available for this feature:
BLAST of FC869008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 432
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869008 ID=FC869008; Name=FC869008; organism=Citrus clementina; type=EST; length=703bpback to top |