FC869011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.064e-49 Identity = 91/114 (79.82%), Postives = 104/114 (91.23%), Query Frame = 2 Query: 314 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 D I IREVW+ NL EEFALIREIVDK++YIAMDTEFPGVVL+PV FK ND NY+TLK+NVD+LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFN+ +DI+AS+S+ELL Sbjct: 8 DSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTLKENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELL 121
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana GN=CAF1-6 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.465e-46 Identity = 84/114 (73.68%), Postives = 101/114 (88.60%), Query Frame = 2 Query: 314 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 D IQIREVWNDNL+EE LIR++VD + Y+AMDTEFPG+V+RPVG FK+ DY+Y+TLK NV++LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF+L DIFA DS+ELL Sbjct: 8 DSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIELL 121
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 2.726e-45 Identity = 84/115 (73.04%), Postives = 100/115 (86.96%), Query Frame = 2 Query: 314 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNLIDDIFASDSVELL 655 D IQIREVWNDNLE E ALIRE+VD + ++AMDTEFPG+V RPVG FK +Y+Y+TLK NV++LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF+L DI+A+DS+ELL Sbjct: 8 DSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELL 122
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana GN=CAF1-2 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.503e-40 Identity = 80/120 (66.67%), Postives = 94/120 (78.33%), Query Frame = 2 Query: 314 DEIQIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNIN------DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 D I+IREVWN NLE+E ALI + +D + Y+AMDTEFPG+V + V A N N +YNY TLK NV+MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+I D+FA DS+ELL Sbjct: 12 DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe GN=caf1 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.412e-30 Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 2 Query: 326 IREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 IR+VW+ NL++E LI ++++Y ++MDTEFPGVV RP+G FK+ +DY+YQTL+ NVD LK+IQ+GL SDE GN P + C WQFNF FNL DD++A +S+ELL Sbjct: 22 IRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDYHYQTLRANVDSLKIIQIGLALSDEEGNAPV----EACTWQFNF-TFNLQDDMYAPESIELL 126
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus GN=Cnot7 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 2 Query: 323 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELL 116
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CNOT7_HUMAN (CCR4-NOT transcription complex subunit 7 OS=Homo sapiens GN=CNOT7 PE=1 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 2 Query: 323 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELL 116
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CNOT7_CHICK (CCR4-NOT transcription complex subunit 7 OS=Gallus gallus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 2 Query: 323 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELL 116
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus GN=CNOT7 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.229e-29 Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 2 Query: 323 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 +I EVW NL+EE IR+++ KYNY+AMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL Sbjct: 11 RICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELL 116
BLAST of FC869011 vs. ExPASy Swiss-Prot
Match: CNOT7_DANRE (CCR4-NOT transcription complex subunit 7 OS=Danio rerio GN=cnot7 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.738e-29 Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 2 Query: 323 QIREVWNDNLEEEFALIREIVDKYNYIAMDTEFPGVVLRPVGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNLIDDIFASDSVELL 655 +I EVW NLEEE IR++ K+NYIAMDTEFPGVV RP+G F++ DY YQ L+ NVD+LK+IQLGLTF +E G P GT WQFNF+ FNL +D++A DS+ELL Sbjct: 11 RICEVWACNLEEEMKRIRQVTRKFNYIAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELL 116 The following BLAST results are available for this feature:
BLAST of FC869011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869011 ID=FC869011; Name=FC869011; organism=Citrus clementina; type=EST; length=657bpback to top |