FC869053

Overview
NameFC869053
Unique NameFC869053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length634
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:1..625. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QORX_HUMAN (Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP53I3 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.266e-36
Identity = 79/173 (45.66%), Postives = 107/173 (61.85%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVS-RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            M A+   +PG PE L ++EV  P   + EVL+KV A+ALNRAD +QR+G Y PP GAS  LGLE SG +  +G      WK+GD   ALL GGG A+ V VP G ++P+P G++L  AAA PE   T +  + +  ++  G+  L+H G SG+GT AIQ+ +  G    VTAG
Sbjct:    1 MLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAG 173          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: VAT1_DANRE (Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.348e-21
Identity = 65/178 (36.52%), Postives = 96/178 (53.93%), Query Frame = 1
Query:  103 ESVGTMKAIVITQPGSPEVLQLQEVED-PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTA 630
            E   T +A+V+T  G  + ++LQ  +  P +K  EV+++V+   LN AD + R+G Y          G+ECSG I +VG+ V+  KVGD+V  L   G + E V V +     +P G+S ++AAA P    T +  +F   HL P +S LVH  + G+G  A Q+ K    V VF TA
Sbjct:   66 EDTFTYRALVLTGYGGYDKVKLQVKKGKPALKSGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVLVLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQSVLVHMAAGGVGIAATQLCKTVNDVTVFGTA 243          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.834e-20
Identity = 66/175 (37.71%), Postives = 94/175 (53.71%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHL-GLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A P+  G + +G I SVG  VS +K GD+V C     GGYAE        + P+P  ++ +  AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAG
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVVVPVPQSHQVLIKVHACGVNPVETYIRSGAYSR-KPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAG 181          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.314e-20
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            M+A+ + + G PEVL+LQ ++  P  KD + LIKV A  +N  +T  R G+Y          G + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  AA      T +  +  ++H+  GES LVHG S G+G  A Q+ +  G++V  TAG
Sbjct:    8 MRAVRVFEFGGPEVLKLQSDIAVPIPKDHQALIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGGNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAG 181          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20
Identity = 66/175 (37.71%), Postives = 92/175 (52.57%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHL-GLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            M+AI + + G PEVL+LQ +V  P  +  +VLIKV A  +N  +T  R G+Y   K A P+  G + +G I SVG  VS +K GD+V C     GGYAE          P+P  +  +  AA      T    +F ++    GES LVHG S G+G    Q+ +  G++V  TAG
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVVVPAPQSHQVLIKVHACGVNPVETYIRSGTYSR-KPALPYTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLATCQIARAHGLKVLGTAG 181          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QOR_BOVIN (Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.247e-20
Identity = 64/173 (36.99%), Postives = 93/173 (53.76%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 630
            M+AI + + G PEVL+LQ +V  P  KD +VLIKV+A  +N  DT  R G++          G + +G I +VG++VS +K GD+V       GGYAE        V  +P  +  K  AA      T +  +  ++ + PGES LVHG S G+G  A Q+ +  G++V  TA
Sbjct:    8 MRAIRVFEFGGPEVLKLQSDVAVPIPKDHQVLIKVQACGVNPVDTYIRSGTHNIKPLLPYTPGFDVAGIIEAVGESVSAFKKGDRVFTTRTISGGYAEYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLHSACVKPGESVLVHGASGGVGIAACQIARAYGLKVLGTA 180          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: VAT1L_MOUSE (Synaptic vesicle membrane protein VAT-1 homolog-like OS=Mus musculus GN=Vat1l PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 57/172 (33.14%), Postives = 89/172 (51.74%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM-GKCQGVRVFVTA 630
            M+A+V+   G    L+L     P+ +D E+ I+V+A  LN  D + R+G+   P       G ECSG + ++G +V  +++GD+V A +    +AE V  P   V  +P  +S  +AAAFP    T ++ +F  ++L  G S LVH    G+G    Q+      V VF TA
Sbjct:   40 MRAVVLAGFGGLNKLRLSRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYTMLFEIANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA 211          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QOR_CAVPO (Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.093e-19
Identity = 62/174 (35.63%), Postives = 90/174 (51.72%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            M+AI + + G PEVL++Q +V  P  KD +VLIKV A  +N  +T  R G+Y          G + +G + S+G +VS +K GD+V       GGYAE        V  +P  +  +  AA      T    +F ++    GES LVHG S G+G  A Q+ +  G++V  TAG
Sbjct:    8 MRAIRVFEFGGPEVLKVQSDVAVPIPKDHQVLIKVHACGINPVETYIRSGTYTRIPLLPYTPGTDVAGVVESIGNDVSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLAACQIARAYGLKVLGTAG 181          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: VAT1L_HUMAN (Synaptic vesicle membrane protein VAT-1 homolog-like OS=Homo sapiens GN=VAT1L PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18
Identity = 57/172 (33.14%), Postives = 88/172 (51.16%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM-GKCQGVRVFVTA 630
            M+A+V+   G    L+L     P+ +D E+ I+V+A  LN  D + R+G+   P       G ECSG + ++G +V  +++GD+V A +    +AE V  P   V  +P  +S  +AAAFP    T +  +F  ++L  G S LVH    G+G    Q+      V VF TA
Sbjct:   42 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA 213          
BLAST of FC869053 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.191e-18
Identity = 60/174 (34.48%), Postives = 91/174 (52.30%), Query Frame = 1
Query:  118 MKAIVITQPGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPHLGLECSGTILSVGKNVSRWKVGDQV-CALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 633
            M+A+ + + G PEVL+L+ ++  P  KD +VLIKV A  +N  +T  R G+Y          G + +G I +VG N S +K GD+V  +    GGYAE        V  +P  +  K  AA      T +  +  ++ +  GES LVHG S G+G  A Q+ +  G+++  TAG
Sbjct:    8 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 181          
The following BLAST results are available for this feature:
BLAST of FC869053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
QORX_HUMAN1.266e-3645.66Quinone oxidoreductase PIG3 OS=Homo sapiens GN=TP5... [more]
VAT1_DANRE3.348e-2136.52Synaptic vesicle membrane protein VAT-1 homolog OS... [more]
QOR_MOUSE2.834e-2037.71Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]
QOR_PONAB6.314e-2035.63Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=... [more]
QOR_RAT8.247e-2037.71Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
QOR_BOVIN8.247e-2036.99Zeta-crystallin OS=Bos taurus GN=CRYZ PE=2 SV=2[more]
VAT1L_MOUSE3.134e-1933.14Synaptic vesicle membrane protein VAT-1 homolog-li... [more]
QOR_CAVPO4.093e-1935.63Quinone oxidoreductase OS=Cavia porcellus GN=CRYZ ... [more]
VAT1L_HUMAN1.191e-1833.14Synaptic vesicle membrane protein VAT-1 homolog-li... [more]
QOR_HUMAN1.191e-1834.48Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31008A05EF AbioticL1 Citrus clementina cDNA clone C31008A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869053 ID=FC869053; Name=FC869053; organism=Citrus clementina; type=EST; length=634bp
ATTTTTCATGAAGTCAAAGGGGAAATGGGAAATGGGAAAAACATCATCAT
TTGCATTAGAATTGTATAAATAAATATTTTGGAATCATTTACTTCTACTC
TGGAAAGTGTAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGATGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTCACCTG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCCTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGGA
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