FC869060

Overview
NameFC869060
Unique NameFC869060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9408 contig Ccv1_Contig9408:14..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 2.205e-72
Identity = 130/179 (72.63%), Postives = 150/179 (83.80%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+R+AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPN+C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEEVRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_VITVI (Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 3.762e-72
Identity = 132/179 (73.74%), Postives = 148/179 (82.68%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+  EIRKAQRAEG AT+LAI TATP NCV QADYPDYYF ITNSEHMT            SMI KR+M LTEEILK NPN+C +M  SLDARQD+ +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVAEIRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITNSEHMTELKEKFKRMCEKSMINKRYMHLTEEILKENPNVCAYMAPSLDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS1_CASGL (Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 8.381e-72
Identity = 129/179 (72.07%), Postives = 149/179 (83.24%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRAEG AT+LAI TATPPNC+ Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK +PNMC +M  SLDARQD+ +VE+PKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAEGPATVLAIGTATPPNCLDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMYLTEEILKEHPNMCAYMAPSLDARQDMVVVEIPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.095e-71
Identity = 131/179 (73.18%), Postives = 149/179 (83.24%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+ EEIRKAQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: ACS2_RUTGR (Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.095e-71
Identity = 130/179 (72.63%), Postives = 147/179 (82.12%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            M + +E+RKAQ++EG A ILAI TATP N  IQADYPDYYF IT SEHMT            SMIRKRHMC ++E LKANP +C HMG SL+ARQDI++VE P++GKEAA KAIKEWG PKS+ITHLIFCTSAGVDMPGADYQLTR++GLNP VKRMMIYQQGCYAG T+LRLAKDLAE
Sbjct:    1 MESLKEMRKAQKSEGPAAILAIGTATPDNVYIQADYPDYYFKITKSEHMTELKDKFKTLCEKSMIRKRHMCFSQEFLKANPEVCKHMGKSLNARQDIAVVETPRIGKEAAVKAIKEWGHPKSSITHLIFCTSAGVDMPGADYQLTRMLGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS2_SOYBN (Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 2.438e-71
Identity = 130/179 (72.63%), Postives = 149/179 (83.24%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+ EEIRKAQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ ++EVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVMEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS3_RUTGR (Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.185e-71
Identity = 133/178 (74.72%), Postives = 145/178 (81.46%), Query Frame = 2
Query:   68 VTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            VT EEIRKAQRA+G AT+LAI TATP N V QADYPDYYF IT SEHMT            SMIRKR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPG DYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    4 VTVEEIRKAQRADGPATVLAIGTATPANYVTQADYPDYYFRITKSEHMTDLKEKFKRMCDKSMIRKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAAKAIKEWGQPKSKITHLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 181          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.159e-71
Identity = 130/179 (72.63%), Postives = 148/179 (82.68%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+ EEIR AQRAEG AT++AI TATPPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M L EEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVEEIRNAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 7.095e-71
Identity = 132/179 (73.74%), Postives = 147/179 (82.12%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MV+  EIR+AQRAEG ATILAI TA PPNCV Q+ YPDYYF ITNSEHMT            SMI+KR+M LTEEILK NPNMC +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+ +GL P VKR M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE 179          
BLAST of FC869060 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 7.095e-71
Identity = 128/179 (71.51%), Postives = 145/179 (81.01%), Query Frame = 2
Query:   65 MVTTEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAE 601
            MVT EE+RKAQRAEG AT++AI TA PPNCV QA YPDYYF ITNSEH              S I+KR+M L EE+LK NPNMC +M  SLDARQDI +VEVPKLGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAE
Sbjct:    1 MVTVEEVRKAQRAEGPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAE 179          
The following BLAST results are available for this feature:
BLAST of FC869060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS2_CAMSI2.205e-7272.63Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHSY_VITVI3.762e-7273.74Chalcone synthase OS=Vitis vinifera GN=CHS PE=2 SV... [more]
CHS1_CASGL8.381e-7272.07Chalcone synthase OS=Casuarina glauca GN=CHS1 PE=2... [more]
CHS1_SOYBN1.095e-7173.18Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
ACS2_RUTGR1.095e-7172.63Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=... [more]
CHS2_SOYBN2.438e-7172.63Chalcone synthase 2 OS=Glycine max GN=CHS2 PE=3 SV... [more]
CHS3_RUTGR3.185e-7174.72Chalcone synthase 3 OS=Ruta graveolens GN=CHS3 PE=... [more]
CHS3_SOYBN4.159e-7172.63Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHSY_PUELO7.095e-7173.74Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSY_HYPAN7.095e-7171.51Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionC31008A12EF AbioticL1 Citrus clementina cDNA clone C31008A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869060 ID=FC869060; Name=FC869060; organism=Citrus clementina; type=EST; length=601bp
AAGCGCAAACTTATCAATTAACTAAGATATAAGTACTGTTTTGGAAGCAA
TCTGACGATCAGAGATGGTAACAACGGAGGAGATTAGAAAGGCTCAGCGA
GCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAACGCCGCCCAA
TTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGATCACCAACA
GCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTGTGTGAGAAG
TCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGATTTTAAAAGC
AAACCCTAATATGTGCTTACACATGGGGACATCACTCGATGCGCGCCAGG
ACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCGGCAACCAAA
GCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCATCTCATTTT
CTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATCAGCTCACAA
GACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATATATCAACAA
GGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGATCTGGCTGA
A
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