FC869077

Overview
NameFC869077
Unique NameFC869077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: M2K2_ARATH (Mitogen-activated protein kinase kinase 2 OS=Arabidopsis thaliana GN=MKK2 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 2.893e-55
Identity = 110/168 (65.48%), Postives = 128/168 (76.19%), Query Frame = 1
Query:  115 MKKGGLNPNVKLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPPIKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKLKLFQKS 618
            MKKGG + N  LKL++P + E S TKFLT+SGTF DGDL VNKDGVRI+SQ E E   PIKP+D+QL+L D+D             QLVQHKWTGQFFALKVIQ+N++E+ R+ IAQELKINQSSQCP +V  YQSFY NGAIS+ILEYMDGGSLADFLK +K    S
Sbjct:    1 MKKGGFSNN--LKLAIPVAGEQSITKFLTQSGTFKDGDLRVNKDGVRIISQLEPEVLSPIKPADDQLSLSDLDMVKVIGKGSSGVVQLVQHKWTGQFFALKVIQLNIDEAIRKAIAQELKINQSSQCPNLVTSYQSFYDNGAISLILEYMDGGSLADFLKSVKAIPDS 166          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: M2K1_ARATH (Mitogen-activated protein kinase kinase 1 OS=Arabidopsis thaliana GN=MKK1 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 4.312e-49
Identity = 98/162 (60.49%), Postives = 118/162 (72.84%), Query Frame = 1
Query:  115 MKKGGLNPNVKLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPPIKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKL 600
            M +G L PN    + LP  E+ S +KFLT+SGTF DGDL VNKDG++ VS +E  APPPI+P DNQL+L D++             QLV+HK T QFFALKVIQ+N EES  R I+QEL+IN SSQCPY+V CYQSFY NG +SIILE+MDGGSLAD LKK+
Sbjct:    1 MNRGSLCPN---PICLPPLEQ-SISKFLTQSGTFKDGDLRVNKDGIQTVSLSEPGAPPPIEPLDNQLSLADLEVIKVIGKGSSGNVQLVKHKLTQQFFALKVIQLNTEESTCRAISQELRINLSSQCPYLVSCYQSFYHNGLVSIILEFMDGGSLADLLKKV 158          

HSP 2 Score: 29.6462 bits (65), Expect = 4.312e-49
Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = 3
Query:  591 EKVKTIPEEYLAAICEQVLKGL 656
            +KV  +PE  L+AIC++VL+GL
Sbjct:  156 KKVGKVPENMLSAICKRVLRGL 177          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: M2K6_ARATH (Mitogen-activated protein kinase kinase 6 OS=Arabidopsis thaliana GN=MKK6 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.023e-42
Identity = 81/154 (52.60%), Postives = 109/154 (70.78%), Query Frame = 1
Query:  145 KLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPPIKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQ-SSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKLK 603
            +LKLS+P+ +E+  + FLT SGTF DGD L+N+ G+R+ S  +       K  D ++  ED++T            QLV+HKW G+FFA+KVIQMN++E  R+QI QELKINQ SSQCP+VVVCY SFY NGA S++LEYMD GSLAD ++++K
Sbjct:   10 QLKLSVPA-QESPISSFLTASGTFHDGDFLLNQKGLRLTSDEKQSRQSDSKELDFEITAEDLETVKVIGKGSGGVVQLVRHKWVGKFFAMKVIQMNIQEEIRKQIVQELKINQASSQCPHVVVCYHSFYHNGAFSLVLEYMDRGSLADVIRQVK 162          

HSP 2 Score: 31.187 bits (69), Expect = 2.023e-42
Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 3
Query:  594 KVKTIPEEYLAAICEQVLKGL 656
            +VKTI E YLA +C+QVL GL
Sbjct:  160 QVKTILEPYLAVVCKQVLLGL 180          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: M2K1_ORYSJ (Mitogen-activated protein kinase kinase 1 OS=Oryza sativa subsp. japonica GN=MEK1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.160e-39
Identity = 75/161 (46.58%), Postives = 112/161 (69.57%), Query Frame = 1
Query:  127 GLNPNVKLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPP--IKPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKLK 603
            G  P+ +LKLS+P+ +E    KFLT SGTF DG+L +N+ G++++S+   + P    +K  D QL+++D++             QLV+HKW G  +ALK IQMN++E+ R+QI QELKINQ++Q  ++V+C+QSFY NG I ++LEYMD GSLAD +K++K
Sbjct:    3 GKKPHKELKLSVPA-QETPVDKFLTASGTFKDGELRLNQRGLQLISEETADEPQSTNLKVEDVQLSMDDLEMIQVIGKGSGGIVQLVRHKWVGTLYALKGIQMNIQEAVRKQIVQELKINQATQNAHIVLCHQSFYHNGVIYLVLEYMDRGSLADIIKQVK 162          

HSP 2 Score: 32.3426 bits (72), Expect = 1.160e-39
Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = 3
Query:  591 EKVKTIPEEYLAAICEQVLKGL 656
            ++VKTI E YLA +C+QVL+GL
Sbjct:  159 KQVKTILEPYLAVLCKQVLEGL 180          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: MP2K1_DICDI (Dual specificity mitogen-activated protein kinase kinase 1 OS=Dictyostelium discoideum GN=mekA PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.402e-13
Identity = 33/75 (44.00%), Postives = 52/75 (69.33%), Query Frame = 1
Query:  373 QLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK 597
            +L  H+ +G + ALKVI ++++E+ R+QI  ELK    +  PY+V  Y +FY+ G+I I LE+M+ GSL+D +KK
Sbjct:  307 KLAYHETSGTYIALKVITLDIQENIRKQIILELKTLHKTSYPYIVSFYDAFYTEGSIFIALEFMELGSLSDIMKK 381          

HSP 2 Score: 25.0238 bits (53), Expect = 1.402e-13
Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  591 EKVKTIPEEYLAAICEQVLKGL 656
            +K  TIPE  L  I  QVL+GL
Sbjct:  380 KKTSTIPEPVLGKIAFQVLQGL 401          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: MP2K2_CHICK (Dual specificity mitogen-activated protein kinase kinase 2 OS=Gallus gallus GN=MAP2K2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.813e-12
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 1
Query:  379 VQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKLKLFQKSI 621
            VQHK +G   A K+I + ++ + R QI +EL++      PY+V  Y +FYS+G ISI +E+MDGGSL   LK+ K   + I
Sbjct:   87 VQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI 167          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: DSOR1_DROME (Dual specificity mitogen-activated protein kinase kinase dSOR1 OS=Drosophila melanogaster GN=Dsor1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11
Identity = 57/186 (30.65%), Postives = 85/186 (45.70%), Query Frame = 1
Query:  115 MKKGGLN---PNVKLKLSLPSSEEASFTKFLTKSGTFMDGDLLVNKDGVRIVSQTETEAPPPI--------------KPSDNQLNLEDIDTXXXXXXXXXXXXQLVQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKLKLFQKSI 621
            M K  LN   P V  + ++ ++  A    F T SGT  D   L+ K    I + TET     +              K    +L+ ED++               V+H  T    A K+I + V+ + ++QI +ELK+      P++V  Y +FYS+G ISI +EYMDGGSL   LK+     +SI
Sbjct:    1 MSKNKLNLVLPPVNTEATVAAATVAPTPPFKTPSGT--DTHSLLGKPKTSIDALTETLEGLDMGDTERKRIKMFLSQKEKIGELSDEDLEKLGELGSGNGGVVMKVRHTHTHLIMARKLIHLEVKPAIKKQILRELKVLHECNFPHIVGFYGAFYSDGEISICMEYMDGGSLDLILKRAGRIPESI 184          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: MP2K2_HUMAN (Dual specificity mitogen-activated protein kinase kinase 2 OS=Homo sapiens GN=MAP2K2 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 1
Query:  379 VQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKLKLFQKSI 621
            VQH+ +G   A K+I + ++ + R QI +EL++      PY+V  Y +FYS+G ISI +E+MDGGSL   LK+ K   + I
Sbjct:   89 VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI 169          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: MP2K2_CANFA (Dual specificity mitogen-activated protein kinase kinase 2 OS=Canis familiaris GN=MAP2K2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.963e-11
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 1
Query:  379 VQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKKLKLFQKSI 621
            VQH+ +G   A K+I + ++ + R QI +EL++      PY+V  Y +FYS+G ISI +E+MDGGSL   LK+ K   + I
Sbjct:   89 VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEI 169          
BLAST of FC869077 vs. ExPASy Swiss-Prot
Match: MP2K1_SERCA (Dual specificity mitogen-activated protein kinase kinase 1 (Fragment) OS=Serinus canaria GN=MAP2K1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.432e-11
Identity = 33/73 (45.21%), Postives = 47/73 (64.38%), Query Frame = 1
Query:  379 VQHKWTGQFFALKVIQMNVEESARRQIAQELKINQSSQCPYVVVCYQSFYSNGAISIILEYMDGGSLADFLKK 597
            V HK +G   A K+I + ++ + R QI +EL++      PY+V  Y +FYS+G ISI +E+MDGGSL   LKK
Sbjct:   78 VSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 150          

HSP 2 Score: 20.7866 bits (42), Expect = 3.432e-11
Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 3
Query:  591 EKVKTIPEEYLAAICEQVLKGL 656
            +K   IPE+ L  +   V+KGL
Sbjct:  149 KKAGRIPEQILGKVSIAVIKGL 170          
The following BLAST results are available for this feature:
BLAST of FC869077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
M2K2_ARATH2.893e-5565.48Mitogen-activated protein kinase kinase 2 OS=Arabi... [more]
M2K1_ARATH4.312e-4960.49Mitogen-activated protein kinase kinase 1 OS=Arabi... [more]
M2K6_ARATH2.023e-4252.60Mitogen-activated protein kinase kinase 6 OS=Arabi... [more]
M2K1_ORYSJ1.160e-3946.58Mitogen-activated protein kinase kinase 1 OS=Oryza... [more]
MP2K1_DICDI1.402e-1344.00Dual specificity mitogen-activated protein kinase ... [more]
MP2K2_CHICK8.813e-1243.21Dual specificity mitogen-activated protein kinase ... [more]
DSOR1_DROME1.151e-1130.65Dual specificity mitogen-activated protein kinase ... [more]
MP2K2_HUMAN1.963e-1141.98Dual specificity mitogen-activated protein kinase ... [more]
MP2K2_CANFA1.963e-1141.98Dual specificity mitogen-activated protein kinase ... [more]
MP2K1_SERCA3.432e-1145.21Dual specificity mitogen-activated protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC31008C07EF AbioticL1 Citrus clementina cDNA clone C31008C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869077 ID=FC869077; Name=FC869077; organism=Citrus clementina; type=EST; length=657bp
CTATGCAAGAAAAGTTTCGCATTCTAAAACCCTAGAGACTTGATTTTTCA
TCATCAAAGACTCTGCAACGACGACTTCGCTTCAGAAGAATCATAATAGA
CACAAGAGCCGATCATGAAGAAGGGAGGCTTAAACCCTAACGTGAAGCTC
AAGCTCTCTCTCCCTTCTTCTGAGGAAGCCTCTTTCACCAAATTTCTGAC
CAAGAGCGGTACGTTCATGGACGGTGATCTGCTCGTTAACAAAGACGGAG
TTCGGATTGTCTCCCAGACTGAAACTGAAGCTCCACCGCCGATTAAGCCA
TCTGACAACCAGTTGAATTTGGAAGATATAGACACAATTAAAGTTGTTGG
AAAGGGAAGTGGTGGAATTGTGCAATTGGTGCAACACAAATGGACTGGCC
AGTTTTTTGCTTTAAAGGTTATTCAAATGAATGTTGAGGAGTCTGCACGA
AGGCAGATTGCTCAGGAGTTGAAAATTAATCAATCATCTCAATGTCCGTA
TGTTGTCGTTTGTTATCAATCTTTCTACAGTAATGGTGCCATTTCAATTA
TTTTGGAGTACATGGATGGTGGGTCTCTAGCTGATTTTCTGAAAAAGTTA
AAACTATTCCAGAAGAGTATCTGGCTGCCATCTGTGAGCAGGTGCTCAAG
GGTTTGT
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