FC869080

Overview
NameFC869080
Unique NameFC869080
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.204e-22
Identity = 62/181 (34.25%), Postives = 89/181 (49.17%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGHFE------LGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKYYTNIID---LASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            D EL+++ P L+I+A Y+VG             + VTNTP                   RR+ E D FV+SG+WK           LG    GK++GIVG GRIG A+AKR + FG  I Y+SR+ K  A  +     +D   L      + +   LT+ET+H++  K +  + P+ ILIN
Sbjct:   58 DKELLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILIN 238          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.575e-22
Identity = 60/181 (33.15%), Postives = 93/181 (51.38%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGHFE------LGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            DAE+ D+ P L+IVA+Y+VG             V +TNTP                   RR+ E D+FV+SG+WK           LG    G+++GIVG GRIG AIA+R + FG  I Y+SR+ K     +    +  + +L      +++   LT+ET+H++N + +  + P+ IL+N
Sbjct:   58 DAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVN 238          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22
Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWKNGHFE------LGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            D E+ D+ P L IVA+Y+VG             + VTNTP                   RR+ E D F +SG+WK           LG    GK++GI+G GRIG A+A+R + FG  I Y+SR+ K  A  +    +  + +L      +++A  LT+ET+H++  + +  + P+ IL+N
Sbjct:   58 DGEVFDNAPRLRIVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKPLEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVN 238          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.331e-21
Identity = 60/181 (33.15%), Postives = 92/181 (50.83%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWK------NGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            D+E+ D+ P L IVA+Y+VG             + VTNTP                   RR+ E D F +SG+WK      +  + LG    GK++GIVG GRIG A+A+R   FG  I Y+SRS K  A  +    + ++ DL      +++A  LT+ET +++N + +  +  + IL+N
Sbjct:   58 DSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVN 238          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 60/181 (33.15%), Postives = 94/181 (51.93%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWK------NGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            D E+ ++ P L IVA+Y+VG             + VTNTP                   R V + D+FV+SG+WK      +  + LG +  GK++GIVG GRIG AIA+R + F   I Y+SR+ KS A  +    Y  + ++      +I+A  LT+ET +++N + +  + P+ IL+N
Sbjct:   58 DQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVN 238          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 60/181 (33.15%), Postives = 90/181 (49.72%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWK------NGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            D E+ ++ P L IVA+Y+VG             + VTNTP                   R V + D FV+SG+WK      +  + LG    GK++GI+GLGRIG AIAKR + F   I Y+SR+ K     +    +  + DL      +++A  LT ET+H++N + +  +  + ILIN
Sbjct:   58 DKEVFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILIN 238          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.378e-18
Identity = 52/179 (29.05%), Postives = 90/179 (50.28%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWK---NGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHAN----YKYYTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            DAE++D+ P L+++++YSVG             + VT+TP                   RR+ E D+ +++G+W    N +F  G +  GK++G+VGLGRIG A AKR+ +F   I Y+    +           +T++  L     I+ +   LT+ET+H++N + +  +  +  LIN
Sbjct:   60 DAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYDIERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLIN 238          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.799e-18
Identity = 59/181 (32.60%), Postives = 86/181 (47.51%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKW---KNGHFE---LGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            D +L+   P L IVA  +VG             + VTNTP                   RRV E D FV+ G+W   + G      LG +  GK++GI+G+GRIG+ +A+  +AFG  I YHSRS K     +    Y ++ DL     IL +   LT+ET H++    +  +  + IL+N
Sbjct:   59 DCDLLSQAPRLRIVAQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYHSRSRKREIEKELGAEYRSLEDLLRESDILSIHLPLTDETRHLIGESELKLMKKTAILVN 239          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 55/181 (30.39%), Postives = 87/181 (48.07%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWK------NGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            D E+ +  P L IVA+Y+VG             + VTNTP                   R + + D+F +SG+WK      +  + LG    GK++GI+G GRIG AIAKR   F   I Y+SR+ K     +    +  + +L      +++A  L +ET+H++N + +  +  + ILIN
Sbjct:   59 DREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILIN 239          
BLAST of FC869080 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18
Identity = 55/178 (30.90%), Postives = 84/178 (47.19%), Query Frame = 3
Query:  171 DAELIDSLPTLEIVASYSVGXXXXXXXXXXXXAVRVTNTPXXXXXXXXXXXXXXXXXXXRRVCEFDEFVKSGKWK---NGHFELGSKFSGKSVGIVGLGRIGTAIAKRVEAFGCPISYHSRSEKSHANYKY---YTNIIDLASNCQILIVACSLTEETHHIVNRKVIDALXPSGILIN 686
            DAE+ ++ P L IVA Y+VG             + VTNTP                   RRV E D +V+ GKWK   +    LG    G+++GIVG+GRIG A+A+R + FG  I Y+    +     +    Y  +  L      + +   LTEET+H++  + +  +  + IL+N
Sbjct:   58 DAEVFEAAPKLRIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRREDFEKELGVEYVPLEKLLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVN 235          
The following BLAST results are available for this feature:
BLAST of FC869080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
GYAR_THELI1.204e-2234.25Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_THEON4.575e-2233.15Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_THEGJ7.804e-2232.04Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRKO1.331e-2133.15Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_PYRFU5.058e-2133.15Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_PYRHO8.628e-2133.15Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_THEPD1.378e-1829.05Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_AERPE1.799e-1832.60Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]
GYAR_PYRAB6.836e-1830.39Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_KORCO6.836e-1830.90Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]

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Properties
Property NameValue
Genbank descriptionC31008C10EF AbioticL1 Citrus clementina cDNA clone C31008C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869080 ID=FC869080; Name=FC869080; organism=Citrus clementina; type=EST; length=688bp
TGGAGAAAATATCTGTTCTTATGACGACTCCAATGTCAAATTACCTCGAA
CAAGAACTCGCAGCCCGCTTCACTCTCTTTAAACTCTGGACTCAATCTTG
CAAAAACAAATTTTTCCAAGAGAATTCAAGTGCCATCAGAGCTGTGGTAG
GTGACACAAAATGTGGGGCTGATGCAGAGCTGATAGATTCACTTCCCACC
TTGGAGATAGTGGCAAGTTACAGTGTGGGATTGGACAAGATTGACTTGGA
CAAGTGTAAAGACAAGGCTGTTAGAGTTACTAACACTCCTGATGTGTTGA
CTGATGACGTGGCAGACTTGGCTGTTGGATTGGTTTTGGCTGTTCTGAGA
AGGGTTTGTGAGTTTGATGAGTTTGTTAAGTCTGGCAAGTGGAAAAATGG
TCACTTCGAATTGGGTTCTAAGTTCAGTGGTAAATCTGTCGGCATTGTTG
GGCTGGGCAGGATTGGAACAGCAATTGCAAAGAGAGTAGAAGCTTTTGGT
TGCCCAATTAGTTATCACTCCAGGTCGGAGAAATCACATGCAAATTATAA
ATACTACACAAACATTATTGACTTAGCCTCCAATTGTCAAATCCTCATTG
TGGCTTGCTCTCTAACAGAGGAAACTCACCACATTGTCAATCGCAAAGTC
ATTGATGCATTANGTCCCAGTGGCATTCTCATCAACAT
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