FC869082

Overview
NameFC869082
Unique NameFC869082
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15461 contig Ccv1_Contig15461:58..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869082 vs. ExPASy Swiss-Prot
Match: CMBL_HUMAN (Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.129e-13
Identity = 46/135 (34.07%), Postives = 79/135 (58.52%), Query Frame = 3
Query:  216 CELVNGVELS-IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWIAKQDFERISKDIYTSTKWMVDEFMAAGISKKLGIVGFCFGGGRV 608
            C++ + +E   +G E   + I+AY+ K PV  + G  ++++ DIFG+Q   TR  A  ++ NGY  +VPD F G +PW      ++F EW+  ++ ++I ++I    K++  +  A    +K+GIVGFC+GG  V
Sbjct:   10 CDIGHRLEYGGLGREVQVEHIKAYVTKSPV--DAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHA----QKIGIVGFCWGGTAV 138          
BLAST of FC869082 vs. ExPASy Swiss-Prot
Match: CMBL_PONAB (Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13
Identity = 45/132 (34.09%), Postives = 78/132 (59.09%), Query Frame = 3
Query:  216 CELVNGVELS-IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWIAKQDFERISKDIYTSTKWMVDEFMAAGISKKLGIVGFCFGG 599
            C++ + +E   +G E   + I+AY+ K PV  + G  ++++ DIFG+Q   TR  A  ++ NGY  +VPD F G +PW      ++F EW+  ++ ++I ++I    K++  +  A    +K+GIVGFC+GG
Sbjct:   10 CDIGHRLEYGGLGREVQVEHIKAYVTKSPV--DAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHA----QKIGIVGFCWGG 135          
BLAST of FC869082 vs. ExPASy Swiss-Prot
Match: CMBL_RAT (Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.042e-12
Identity = 42/121 (34.71%), Postives = 73/121 (60.33%), Query Frame = 3
Query:  246 IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWIAKQDFERISKDIYTSTKWMVDEFMAAGISKKLGIVGFCFGG 599
            +G+E   + I+AY+ + PV  + G  ++++ DIFG+Q S TR  A  +A NGY  +VPD F G +PW      + F EW+  ++  +I++++    +++  +  A    +K+GIVGFC+GG
Sbjct:   21 MGQEVQVEHIKAYVTRSPV--DAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDFFVGQEPWDPAGDWSTFPEWLKSRNARKINREVDAVLRYLKQQCHA----QKIGIVGFCWGG 135          
BLAST of FC869082 vs. ExPASy Swiss-Prot
Match: CMBL_XENTR (Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.189e-12
Identity = 39/131 (29.77%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  216 CELVNGVELSI-GEEAD-DAIQAYLFKPVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWIAKQDFERISKDIYTSTKWMVDEFMAAGISKKLGIVGFCFGG 599
            C++ + +E    G+E   + I+AY+ KP  ++    ++++ DIFG+Q   TR  A  +  +GY  + PD F G +PW     ++ F EW+  +   ++ K+I    K++ ++       KK+G++GFC+GG
Sbjct:   10 CDIGDKIEYGAKGQEVQIEHIKAYVSKP-HSSTDKAVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHV----KKIGVIGFCWGG 135          
BLAST of FC869082 vs. ExPASy Swiss-Prot
Match: CMBL_MOUSE (Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11
Identity = 43/139 (30.94%), Postives = 79/139 (56.83%), Query Frame = 3
Query:  216 CELVNGVELS-IGEEAD-DAIQAYLFK-PVKNNNGTGLLLLSDIFGFQDSATRDFAYRVACNGYNVLVPDLFRG-DPWSKERPKAMFEEWIAKQDFERISKDIYTSTKWMVDEFMAAGISKKLGIVGFCFGGGRVIDVL 620
            C++ + +E   +G E   + I+AY+ + PV  + G  ++++ DIFG+Q   TR  A  +A NGY  +VPD F G +PW      + F  W+  ++  ++++++    +++  +  A    +K+GIVGFC+GG  V  V+
Sbjct:   10 CDIGHKLEYGGMGHEVQVEHIKAYVTRSPV--DAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDFFVGQEPWDPAGDWSTFPAWLKSRNARKVNREVDAVLRYLRQQCHA----QKIGIVGFCWGGVVVHQVM 142          
The following BLAST results are available for this feature:
BLAST of FC869082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CMBL_HUMAN6.129e-1334.07Carboxymethylenebutenolidase homolog OS=Homo sapie... [more]
CMBL_PONAB8.005e-1334.09Carboxymethylenebutenolidase homolog OS=Pongo abel... [more]
CMBL_RAT3.042e-1234.71Carboxymethylenebutenolidase homolog OS=Rattus nor... [more]
CMBL_XENTR5.189e-1229.77Carboxymethylenebutenolidase homolog OS=Xenopus tr... [more]
CMBL_MOUSE7.492e-1130.94Carboxymethylenebutenolidase homolog OS=Mus muscul... [more]
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Properties
Property NameValue
Genbank descriptionC31008D01EF AbioticL1 Citrus clementina cDNA clone C31008D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869082 ID=FC869082; Name=FC869082; organism=Citrus clementina; type=EST; length=656bp
ATGGAGCTGGCAGTCCCCCCTTAAGAACATCGTCGGCTTCAGTTTTCAAT
AGCCCAGTTCGCCGTCTTTACTCGTTCTCCAGGAGCTCTGCTCCTCTGCT
TAAGAAGAGCGGTACAAATTTTCAAAGGCCATCATTTACGAGGAATCATA
ATGCAGTCTTCAAAGTATCTTGTAGTCTAGTGGAAGTGGAAGAAGACGGC
TTAGATGATGAAACTTGTGAGTTGGTTAATGGAGTTGAGCTTTCCATTGG
TGAGGAGGCTGACGACGCCATCCAAGCTTATCTTTTTAAACCTGTCAAAA
ACAACAACGGAACCGGTTTGCTTCTGCTCTCTGATATTTTTGGATTTCAG
GATTCAGCCACAAGAGATTTCGCATATCGTGTTGCTTGCAATGGTTACAA
TGTTCTTGTTCCGGACTTATTTCGTGGGGATCCATGGTCAAAGGAGCGAC
CAAAGGCTATGTTTGAAGAATGGATAGCAAAGCAAGACTTTGAGAGGATT
TCAAAAGACATATACACTTCAACAAAATGGATGGTTGATGAATTTATGGC
TGCAGGAATTTCAAAGAAGCTTGGTATAGTTGGGTTTTGTTTTGGAGGTG
GCCGAGTAATAGATGTTCTGGCTCAGGATCAAGGTGGTTGTTTTGGCATT
GGGGTC
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