FC869095 | Citrus Genome Database

Overview


Name	FC869095
Unique Name	FC869095
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	685

Libraries


Library Name	Type
AbioticL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
FC869095_ssr31	microsatellite	FC869095_ssr31:31..40.	BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339	contig	Ccv1_Contig10339:5..690.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.008e-96
Identity = 165/186 (88.71%), Postives = 176/186 (94.62%), Query Frame = 1

Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            MAITI +V+ARQIFDSRGNPTVE D+  SDGH+ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN+IIGPAL GKDPTEQTA+DN+MVQ+LDG VNEWGWCKQKLGANAILAVSLA+CKAGAHVK IPLYKHIA L+GNKNLVLPVPAFNVINGGSHAGNKLAM EFMILPVGASSFK+
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADIKLSDGHLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNSIIGPALIGKDPTEQTALDNFMVQELDGTVNEWGWCKQKLGANAILAVSLALCKAGAHVKGIPLYKHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 186

HSP 2 Score: 38.1206 bits (87), Expect = 1.008e-96
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMG EVYHHLK+VI
Sbjct:  184 FKEAMKMGAEVYHHLKSVI 202

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 4.170e-95
Identity = 164/186 (88.17%), Postives = 173/186 (93.01%), Query Frame = 1

Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDG VNEWGWCKQKLGANAILAVSLAVCKAGAHVK IPLY+HIA L+GNKNLVLPVPAFNVINGGSHAGNKLAM EFMILPVGASSFK+
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYEHIANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 186

HSP 2 Score: 38.1206 bits (87), Expect = 4.170e-95
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMG EVYHHLK+VI
Sbjct:  184 FKEAMKMGAEVYHHLKSVI 202

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 7.097e-95
Identity = 163/186 (87.63%), Postives = 172/186 (92.47%), Query Frame = 1

Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            MAITI +V+ARQIFDSRGNPTVE DV  SDG++ARAAVP GASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+Q  IDN+MVQQLDG VNEWGWCKQKLGANAILAVSLAVCKAGAHVK IPLYKH+A L+GNKNLVLPVPAFNVINGGSHAGNKLAM EFMILPVGASSFK+
Sbjct:    1 MAITIVSVRARQIFDSRGNPTVEADVKLSDGYLARAAVPRGASTGIYEALELRDGGSDYLGKGVSKAVENVNIIIGPALVGKDPTDQVGIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKGIPLYKHVANLAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 186

HSP 2 Score: 38.1206 bits (87), Expect = 7.097e-95
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMG EVYHHLK+VI
Sbjct:  184 FKEAMKMGAEVYHHLKSVI 202

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 9.301e-92
Identity = 162/186 (87.10%), Postives = 168/186 (90.32%), Query Frame = 1

Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            MA+TIT VKARQIFDSRGNPTVEVDV  SDG  AR AVPSGASTGIYEALELRDGGSDYLGKGV KAVSNVN IIGPA+ GKDPTEQ  IDN+MVQQLDG  NEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAM EFMILP GASSFK+
Sbjct:    1 MAVTITWVKARQIFDSRGNPTVEVDVGLSDGSYARGAVPSGASTGIYEALELRDGGSDYLGKGVLKAVSNVNNIIGPAIVGKDPTEQVEIDNFMVQQLDGTSNEWGWCKQKLGANAILAVSLAVCKAGAMVKKIPLYQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKE 186

HSP 2 Score: 36.5798 bits (83), Expect = 9.301e-92
Identity = 15/19 (78.95%), Postives = 19/19 (100.00%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMGVEVYH+LK++I
Sbjct:  184 FKEAMKMGVEVYHNLKSII 202

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 4.584e-91
Identity = 157/186 (84.41%), Postives = 169/186 (90.86%), Query Frame = 1

Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGS YLGKGVSKAV+NVN++IGPAL GKDPT QT IDN+MVQQLDG  NEWGWCKQKLGANAILAVSLAVCKAGA +K+IPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAM EFMILP GA+SFK+
Sbjct:    1 MAATIQSVKARQIFDSRGNPTVEVDVFCSDGTFARAAVPSGASTGVYEALELRDGGSYYLGKGVSKAVNNVNSVIGPALIGKDPTAQTEIDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAVCKAGASIKRIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKE 186

HSP 2 Score: 39.6614 bits (91), Expect = 4.584e-91
Identity = 17/19 (89.47%), Postives = 19/19 (100.00%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMGVEVYHHLK+VI
Sbjct:  184 FKEAMKMGVEVYHHLKSVI 202

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 2.259e-90
Identity = 155/184 (84.24%), Postives = 167/184 (90.76%), Query Frame = 1

Query:   85 ITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            +TI  VKARQI+DSRGNPTVE D+   DG  ARAAVPSGASTG+YEALELRDGG DY+GKGV KAV NVN IIGPAL GKDPT+QTAIDN+MVQQLDG VNEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLY+HIAE++GNKN+VLPVPAFNVINGGSHAGNKLAM EFMILP GASSFK+
Sbjct:    2 VTIKCVKARQIYDSRGNPTVEADIHLDDGTYARAAVPSGASTGVYEALELRDGGKDYMGKGVYKAVKNVNEIIGPALVGKDPTQQTAIDNFMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAQVKKIPLYQHIAEIAGNKNMVLPVPAFNVINGGSHAGNKLAMQEFMILPTGASSFKE 185

HSP 2 Score: 34.6538 bits (78), Expect = 2.259e-90
Identity = 15/19 (78.95%), Postives = 18/19 (94.74%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMG EVYH+LK+VI
Sbjct:  183 FKEAMKMGSEVYHNLKSVI 201

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 5.015e-90
Identity = 155/186 (83.33%), Postives = 167/186 (89.78%), Query Frame = 1

Query:   79 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            MA TI +VKARQIFDSRGNPTVEVDV  SDG  ARAAVPSGASTG+YEALELRDGGSDYLGKGVSKAV NVN++I PAL GKDPT Q  +DN+MVQQLDG  NEWGWCKQKLGANAILAVSLA+CKAGA +KKIPLY+HIA L+GNK LVLPVPAFNVINGGSHAGNKLAM EFMILP GA+SFK+
Sbjct:    1 MAATIVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDGGSDYLGKGVSKAVDNVNSVIAPALIGKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVSLAICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQEFMILPTGAASFKE 186

HSP 2 Score: 36.965 bits (84), Expect = 5.015e-90
Identity = 16/19 (84.21%), Postives = 19/19 (100.00%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMGVEVYH+LK+VI
Sbjct:  184 FKEAMKMGVEVYHNLKSVI 202

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 6.542e-90
Identity = 153/183 (83.61%), Postives = 169/183 (92.35%), Query Frame = 1

Query:   88 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            TI ++KARQIFDSRGNPTVEVDV  S+G  ARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAV+NVN+IIGPAL GKDPT+QT +DN+MV QLDG  NEWGWCK+KLGANAILAVSLAVCKAGA V+ +PLYKHIA+L+GNK LVLPVPAFNVINGGSHAGNKLAM EFMILPVGA++FK+
Sbjct:    3 TIKSIKARQIFDSRGNPTVEVDVHISNGVFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVNNVNSIIGPALVGKDPTDQTGLDNFMVHQLDGTQNEWGWCKEKLGANAILAVSLAVCKAGAAVRNVPLYKHIADLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFKE 185

HSP 2 Score: 38.891 bits (89), Expect = 6.542e-90
Identity = 17/19 (89.47%), Postives = 18/19 (94.74%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMG EVYHHLKAVI
Sbjct:  183 FKEAMKMGCEVYHHLKAVI 201

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.452e-89
Identity = 157/183 (85.79%), Postives = 167/183 (91.26%), Query Frame = 1

Query:   91 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAID-NYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            IT +KARQIFDSRGNPTVE +VTT++G V+RAAVPSGASTG+YEALELRDGGSDYLGKGV KAV NVN IIGPAL GKD TEQTAID ++M QQLDG VNEWGWCKQKLGANAILAVSLAVCKAGA VKKIPLYKHIA L+GN  LVLPVPAFNVINGGSHAGNKLAM EFMILPVGASSFK+
Sbjct:    4 ITHIKARQIFDSRGNPTVEAEVTTANGVVSRAAVPSGASTGVYEALELRDGGSDYLGKGVLKAVDNVNKIIGPALIGKDATEQTAIDIDFMFQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGASVKKIPLYKHIANLAGNPKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKE 186

HSP 2 Score: 40.817 bits (94), Expect = 1.452e-89
Identity = 18/19 (94.74%), Postives = 19/19 (100.00%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMGVEVYHHLKAVI
Sbjct:  184 FKEAMKMGVEVYHHLKAVI 202

[Close]

BLAST of FC869095 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 5.486e-89
Identity = 155/183 (84.70%), Postives = 164/183 (89.62%), Query Frame = 1

Query:   88 TITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGIVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMXEFMILPVGASSFKK 636
            TIT VKARQIFDSRGNPTVEVD+ TS+G    AAVPSGASTGIYEALELRDGGSDYLGKGVSKAV NVN IIGPAL GKDPT+QTAIDN+MV +LDG  NEWGWCKQKLGANAILAVSLAVCKAGA V  IPLYKHIA L+GN  +VLPVPAFNVINGGSHAGNKLAM EFMILPVGA+SFK+
Sbjct:    3 TITVVKARQIFDSRGNPTVEVDIHTSNGIKVTAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVGNVNNIIGPALIGKDPTQQTAIDNFMVHELDGTQNEWGWCKQKLGANAILAVSLAVCKAGAVVSGIPLYKHIANLAGNPKIVLPVPAFNVINGGSHAGNKLAMQEFMILPVGAASFKE 185

HSP 2 Score: 39.6614 bits (91), Expect = 5.486e-89
Identity = 17/19 (89.47%), Postives = 19/19 (100.00%), Query Frame = 3

Query:  627 FQEAMKMGVEVYHHLKAVI 683
            F+EAMKMGVEVYHHLK+VI
Sbjct:  183 FKEAMKMGVEVYHHLKSVI 201

The following BLAST results are available for this feature:

BLAST of FC869095 vs. ExPASy Swiss-Prot

BLAST of FC869095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_RICCO	1.008e-96	88.71	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO1_HEVBR	4.170e-95	88.17	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO2_HEVBR	7.097e-95	87.63	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO1_MAIZE	9.301e-92	87.10	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO2_MAIZE	4.584e-91	84.41	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO_MESCR	2.259e-90	84.24	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]
ENO_ORYSJ	5.015e-90	83.33	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO_SOLLC	6.542e-90	83.61	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO_ALNGL	1.452e-89	85.79	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]
ENO_ARATH	5.486e-89	84.70	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	C31008E02EF AbioticL1 Citrus clementina cDNA clone C31008E02, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC869095 ID=FC869095; Name=FC869095; organism=Citrus clementina; type=EST; length=685bp
GAATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCTAGAT
CTTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACTGCCG
TCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGAGGTC
GACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAAGCGG
TGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGCTCTG
ATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGCCATC
ATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTATTGA
CAACTATATGGTACAACAACTTGATGGAATTGTAAATGAGTGGGGTTGGT
GCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGCTGTC
TGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATATTGC
CGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTCAATG
TCATTAATGGTGGATCACATGCTGGGAACAAACTTGCTATGCANGAGTTT
ATGATTCTTCCTGTAGGAGCTTCCTCTTTCAAGAAGCCATGAAGATGGGT
GTAGAAGTATATCACCATCTGAAGGCTGTGATTAA