FC869097

Overview
NameFC869097
Unique NameFC869097
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length597
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC869097_ssr3 microsatellite FC869097_ssr3:3..23. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 4.982e-61
Identity = 104/166 (62.65%), Postives = 129/166 (77.71%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S +K+LPGF+GPLPFELETGY+GVGE  + Q FYYF+KSE NP+ DPLLLWL+GGPGCS+F+GL YE GP+ F V  YNGS PTL    YSWTK A+I+++D PVGTG+SY++ PLA    D    ++VD+FLRKWL  HPE  SNP Y GG+SYSG +VP +VQ+
Sbjct:   25 SIIKYLPGFEGPLPFELETGYIGVGEEDEDQMFYYFIKSESNPKTDPLLLWLSGGPGCSSFTGLIYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPLADIPSDTGSAKRVDEFLRKWLTKHPEYFSNPFYAGGNSYSGKMVPVIVQE 190          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 8.497e-61
Identity = 103/164 (62.80%), Postives = 128/164 (78.05%), Query Frame = 2
Query:   65 VKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            VK LPGF+GPLPFELETGYV +GESGD + FYYFVKSE+NP  DPL++WLTGGPGCS+  GL +  GP+ F   EYNG+ P L L  +SWTK A+IL++++P G+GYSYAKT  A ++ D KQ+ Q+DQFLR W + HPE +SNP Y+GGDSYSG +VP  VQQ
Sbjct:   27 VKSLPGFEGPLPFELETGYVSIGESGDVELFYYFVKSERNPENDPLMIWLTGGPGCSSICGLLFANGPLAFKGDEYNGTVPPLELTSFSWTKVANILYLEAPAGSGYSYAKTRRAFESSDTKQMHQIDQFLRSWFVKHPEFISNPFYVGGDSYSGKIVPGAVQQ 190          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 231.491 bits (589), Expect = 2.472e-60
Identity = 102/166 (61.45%), Postives = 130/166 (78.31%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S +++LPGF+GPLPFELETGY+GVG+  + Q FYYF+KSE NP EDPLL+WLTGGPGCS+FSGL YE GP+ F V  YNGS PTL    YSWTK A+I+++D PVGTG+SY++ P A    D   V++V++F+RKWL  HPE  SNP Y+ G+SYSG V+PA+VQ+
Sbjct:   26 SIIRYLPGFEGPLPFELETGYIGVGQKEEDQLFYYFIKSENNPEEDPLLVWLTGGPGCSSFSGLVYENGPLAFKVETYNGSVPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPFADIPSDTGSVKRVNEFVRKWLAKHPEYFSNPFYVTGNSYSGKVIPAIVQE 191          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.603e-59
Identity = 103/166 (62.05%), Postives = 131/166 (78.92%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S VKFLPGF+GPLPFELETGY+GVGE  + Q FYYF+KSE+NP+EDPLLLWLTGGPGCSA SGL Y+ GP+   +  YNG+ P+L    YSWTK +S++F+D PVGTG+SY++T L ++  D  + +++ +FL+KWL  H E  SNP Y+GGDSYSGLVVPA VQ+
Sbjct:   31 SIVKFLPGFEGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGLVVPATVQE 196          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 1.603e-59
Identity = 100/166 (60.24%), Postives = 130/166 (78.31%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S VKFLPGF+GPLPFELETGY+G+GE  + Q FYYF+KSEKNP EDPLLLWL+GGPGCS+ +GL +E GP+      YNGS P+L    YSWTK A+I+F+D PVG+G+SY++TPL  +  D  +V+++ +FL+KWL  H +  SNP Y+GGDSYSG++VP LVQ+
Sbjct:   24 SIVKFLPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSEKNPEEDPLLLWLSGGPGCSSLTGLLFENGPVALKFEVYNGSVPSLVSTTYSWTKMANIIFLDQPVGSGFSYSRTPLVDKISDTGEVKRIYEFLQKWLSKHQQFFSNPFYVGGDSYSGMIVPPLVQE 189          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.733e-59
Identity = 103/166 (62.05%), Postives = 129/166 (77.71%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            ST++FLPGFQGPLPFELETGY+GVGE+   Q FYYF+KSE NP +DPLLLWL+GGP CS+F+ L YE GPI F   EYNGS P+L    Y+WTK ASIL++D PVGTG+SY++ PLA    D    + V++FL KWL  HPE LSNP+Y+ G+SYSG+V+P +VQ+
Sbjct:   28 STIRFLPGFQGPLPFELETGYIGVGEAEKDQMFYYFIKSESNPEKDPLLLWLSGGPFCSSFTALIYENGPIAFKAEEYNGSIPSLVSTTYAWTKVASILYLDQPVGTGFSYSRNPLADIPSDTGVAKPVNEFLHKWLDKHPEFLSNPLYVAGNSYSGIVIPTIVQE 193          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP18_ARATH (Serine carboxypeptidase-like 18 OS=Arabidopsis thaliana GN=SCPL18 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 4.663e-59
Identity = 99/166 (59.64%), Postives = 129/166 (77.71%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S + +LPGF+G LPF LETGY+GVGE    Q FYYF+KSE NP EDPL++WLTGGP C+A S LA+EIGP+ F    YNG  P+L    YSWTK ASI+F+D PVGTGYSY+ TPL+ +  D  + +Q  +FL+KWL+++P+ +SNP+Y+GGDSY+G+VVPA+VQQ
Sbjct:   27 SVISYLPGFEGLLPFHLETGYIGVGEGEKVQLFYYFIKSENNPEEDPLIIWLTGGPACTALSALAFEIGPLTFKTEGYNGGLPSLVSTSYSWTKVASIIFLDQPVGTGYSYSTTPLSYKPSDTGEAKQTYEFLQKWLVENPQFVSNPIYVGGDSYAGIVVPAIVQQ 192          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 6.090e-59
Identity = 98/166 (59.04%), Postives = 128/166 (77.11%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S +K+LPGF+GPLPFELETGY+GVG+  + Q FYYF+KSE NP EDPLL+WL+GGPGCS+F+GL YE GP+ F V  YNGS PTL    YSWTK A+I+++D PVG G+SY++ P A +  D    + V++F+RKWL  HP+  SNP Y+ G+SYSG V+PA+VQ+
Sbjct:   25 SIIKYLPGFEGPLPFELETGYIGVGDEDEDQMFYYFIKSESNPEEDPLLVWLSGGPGCSSFTGLVYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGAGFSYSRNPFADRPSDTGSAKLVNEFVRKWLAKHPDYFSNPFYVTGNSYSGKVIPAIVQE 190          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.039e-58
Identity = 100/166 (60.24%), Postives = 129/166 (77.71%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S VK LPGF GPLPFELETGY+GVGE  + Q FYYF+KSE+NP+EDPLLLWL+GGPGCS+ SGL YE GP+N  +  YNG+ P+L    YSWTK +SI+++D PVGTG+SY++T L ++  D  + +++ +FL KWL  H E  SNP Y+GGDSY G+V+PALVQ+
Sbjct:   27 SIVKSLPGFDGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPQEDPLLLWLSGGPGCSSISGLLYENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRIHEFLHKWLGKHQEFSSNPFYVGGDSYCGMVIPALVQE 192          
BLAST of FC869097 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.039e-58
Identity = 101/166 (60.84%), Postives = 129/166 (77.71%), Query Frame = 2
Query:   59 STVKFLPGFQGPLPFELETGYVGVGESGDAQPFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSPPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFLRKWLLDHPELLSNPVYIGGDSYSGLVVPALVQQ 556
            S VK LPGF+GPLPFELETGY+GVGE  + Q FYYF+KSE+NP+EDPLLLWLTGGPGCSA SGL YE GP+   +  YNG+ P+L    YSWTK +S++F+D PVGTG+SY++T L ++  D  + +++ +FL+KWL  H E  SNP Y+GGDSYSG+ VPA VQ+
Sbjct:   31 SVVKSLPGFEGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPSDTGEAKRIHEFLQKWLGKHQEFSSNPFYVGGDSYSGITVPATVQE 196          
The following BLAST results are available for this feature:
BLAST of FC869097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
SCP16_ARATH4.982e-6162.65Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCP19_ARATH8.497e-6162.80Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCP15_ARATH2.472e-6061.45Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
SCP4_ARATH1.603e-5962.05Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP13_ARATH1.603e-5960.24Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP17_ARATH2.733e-5962.05Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP18_ARATH4.663e-5959.64Serine carboxypeptidase-like 18 OS=Arabidopsis tha... [more]
SCP14_ARATH6.090e-5959.04Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]
SCP7_ARATH1.039e-5860.24Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP6_ARATH1.039e-5860.84Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC31008E04EF AbioticL1 Citrus clementina cDNA clone C31008E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869097 ID=FC869097; Name=FC869097; organism=Citrus clementina; type=EST; length=597bp
CCTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGTTTGCAGCTTGCAGC
TGGAATAATCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCC
TTTGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACA
GCCCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTC
TCTTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTT
GCTTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAG
CCCCCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCA
TATTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACC
CCACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCA
ATTTCTTCGAAAGTGGCTATTGGATCACCCTGAGCTCCTCTCAAATCCAG
TCTACATTGGAGGGGATTCATACTCTGGCCTCGTTGTCCCAGCACTTGTG
CAACAGATCTNCAATGAAAATGAAGAGGATATCAACCACTAATAAAT
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