FC869099

Overview
NameFC869099
Unique NameFC869099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length568
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869099 vs. ExPASy Swiss-Prot
Match: TL15A_ARATH (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.720e-28
Identity = 64/88 (72.73%), Postives = 70/88 (79.55%), Query Frame = 3
Query:  198 LFSLCESVTKTXXXXXXXXXXXXXDPALAFKGGGPYGAEVTRGQDLTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTG 461
            ++SL E V+K              DPALAFKGGGPYG  VTRGQDL+GKDFSG+TLI+QDFKTSILRQANFKGAKLLGASFFDADLTG
Sbjct:   53 VWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLIRQDFKTSILRQANFKGAKLLGASFFDADLTG 140          
The following BLAST results are available for this feature:
BLAST of FC869099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TL15A_ARATH1.720e-2872.73Thylakoid lumenal 15 kDa protein 1, chloroplastic ... [more]
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Properties
Property NameValue
Genbank descriptionC31008E06EF AbioticL1 Citrus clementina cDNA clone C31008E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869099 ID=FC869099; Name=FC869099; organism=Citrus clementina; type=EST; length=568bp
TAAGCACTTCCATTATCCATTCACATTACACGAAAATAATGCCCCTTCTG
AACGTCTCCATGTCTTCCGAATTCACGCAAATACCTCCAATTTCTTCCAC
CAAACCCCTCTTCACATTGACAAACCCACTTGTCTCCTTTCCAGGCCACT
CTTCGCCTCAGTTGCTGAAGTGTCAGATAAAGTCTCAGGAGAATTTTCTC
TTTTCTTTATGTGAGTCGGTGACTAAAACCAGCTTGCTAGCTCTTGTTTC
TGCTTCTTTGTTCTTCGTTGATCCTGCTCTGGCATTTAAGGGGGGAGGTC
CATATGGAGCCGAAGTGACAAGGGGTCAAGATCTTACAGGAAAGGACTTC
AGTGGCAAGACTTTGATCAAGCAAGACTTCAAAACGTCTATATTGAGACA
AGCCAATTTTAAGGGTGCCAAGTTACTGGGTGCTAGCTTCTTTGATGCTG
ATTTAACAGGGGGAAAATGAAAAGGCAGCTGGCTTATAGCAAACAACTCC
AAATGAGCTTTTCCACATGAGGGTTGTTGCATATATTACTCAGATGCCTG
TAGCTGCCAATGGGGGAA
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