FC869109

Overview
NameFC869109
Unique NameFC869109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15279 contig Ccv1_Contig15279:444..1156. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 448.743 bits (1153), Expect = 1.376e-125
Identity = 214/237 (90.30%), Postives = 228/237 (96.20%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            EE+YV + KEEI +VV LQEELDIDVLVHGEPERN+MVEYFGEQLSGFAFTANGWVQSYGSRCVKPP+IYGDVSRPKAMTVFWS++AQSMT+RPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEK GI +IQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCG+QD+TQIHTHMCYS+FNDIIHSIIDMDADVITIENSRS+E LLSVFREGV+Y A IGPG
Sbjct:  460 EEDYVKAIKEEIKKVVDLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPVIYGDVSRPKAMTVFWSAMAQSMTSRPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDSTQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPG 696
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 446.817 bits (1148), Expect = 5.228e-125
Identity = 217/237 (91.56%), Postives = 226/237 (95.36%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            EEEYV + KEEIN+VVKLQEELDIDVLVHGEPERN+MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPK MTVFWS+ AQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEKAGI +IQIDEAALREGLPLRKSEHAFYLDWAVHSFRITN G+QDTTQIHTHMCYSNFNDIIHSII+MDADVITIENSRS+E LLSVFREGV+Y A IGPG
Sbjct:  459 EEEYVKAIKEEINKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSTAAQSMTQRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGITVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIINMDADVITIENSRSDEKLLSVFREGVKYGAGIGPG 695
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 446.432 bits (1147), Expect = 6.827e-125
Identity = 216/237 (91.14%), Postives = 227/237 (95.78%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            EEEYV + KEEI++VVKLQEELDIDVLVHGEPERN+MVEYFGEQLSGFAF+ANGWVQSYGSRCVKPPIIYGDVSRP  MTVFWSS+AQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIK+EVEDLEKAGIN+IQIDEAALREGLPLRKSEH FYL WAVHSFRITN G+QDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRS+E LLSVFREGV+Y A IGPG
Sbjct:  460 EEEYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFSANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSSMAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKNEVEDLEKAGINVIQIDEAALREGLPLRKSEHDFYLKWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPG 696
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.424e-122
Identity = 212/237 (89.45%), Postives = 224/237 (94.51%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E++YV + KEEI++VVKLQEELDIDVLVHGEPERN+MVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRP  MTVFWS  AQSMT RPMKGMLTGPVTILNWSFVRNDQPR ETCYQIALAIKDEVEDLEKAGIN+IQIDEAALREGLPLRK+EHAFYLDWAVHSFRITN  +QDTTQIHTHMCYSNFNDIIHSIIDMDADV+TIENSRS+E LLSVFREGV+Y A IGPG
Sbjct:  460 EDDYVKAIKEEISKVVKLQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPNPMTVFWSQTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRFETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKAEHAFYLDWAVHSFRITNLPLQDTTQIHTHMCYSNFNDIIHSIIDMDADVMTIENSRSSEKLLSVFREGVKYGAGIGPG 696
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_MARAV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metE PE=3 SV=1)

HSP 1 Score: 338.576 bits (867), Expect = 2.005e-92
Identity = 163/237 (68.78%), Postives = 196/237 (82.70%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E+ Y+   + EI R V+ QE+L +DVLVHGEPERN+MVEYFGEQL G+AFT  GWVQSYGSRCVKPPI++GD+ RP+AMTV W   AQS+T +P+KGMLTGPVTILNWSFVR+DQPR ++C Q+ALAI++EV+DLEKAG+NIIQIDEAALREGLPLR+S+ A YL+WA++SFRI   G+ D+TQIHTHMCYS FNDII +I  MDADVITIE SRS+  LL  FR   +Y   IGPG
Sbjct:  458 EQAYIEQMRAEIVRCVEAQEKLGLDVLVHGEPERNDMVEYFGEQLDGYAFTRFGWVQSYGSRCVKPPILFGDIRRPQAMTVEWIRYAQSLTDKPVKGMLTGPVTILNWSFVRDDQPRKDSCLQLALAIREEVQDLEKAGVNIIQIDEAALREGLPLRQSDWATYLEWAINSFRIAANGVDDSTQIHTHMCYSEFNDIIEAIARMDADVITIETSRSDMELLDAFR-SFEYPNDIGPG 693
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BURA4 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=metE PE=3 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 3.420e-92
Identity = 166/237 (70.04%), Postives = 194/237 (81.86%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E  Y A+ + EI R V+ QE L++DVLVHGE ERN+MVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ +IQIDEAALREGLPLR+++   YL WAV +FRIT  G+QD TQIHTHMCYS FNDII SI DMDADVITIE SRS+  LL  F +  +Y   IGPG
Sbjct:  463 EAGYRAAMQAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DSFRYPNEIGPG 698
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BURCM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metE PE=3 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 7.619e-92
Identity = 166/237 (70.04%), Postives = 193/237 (81.43%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E  Y A+ + EI R V+ QE L +DVLVHGE ERN+MVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLEKAG+ +IQIDEAALREGLPLR+++   YL WAV +FRIT  G+QD TQIHTHMCYS FNDII SI DMDADVITIE SRS+  LL  F +  +Y   IGPG
Sbjct:  463 EAGYRAAMQAEIERSVREQESLGLDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEKAGVRVIQIDEAALREGLPLRRAQWGEYLKWAVEAFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DSFRYPNEIGPG 698
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BURCJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=metE PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.300e-91
Identity = 165/237 (69.62%), Postives = 194/237 (81.86%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E  Y  + + EI R V+ QE L++DVLVHGE ERN+MVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI+DEV DLE+AG+ +IQIDEAALREGLPLR+++ + YL WAV SFRIT  G+QD TQIHTHMCYS FNDII SI DMDADVITIE SRS+  LL  F +  +Y   IGPG
Sbjct:  463 EAGYRTAMQAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWITYAQSLTNKPMKGMLTGPVTILNWSFVRDDQPRSVSCYQLALAIRDEVLDLEQAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DDFKYPNEIGPG 698
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BURCH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=metE PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.300e-91
Identity = 165/237 (69.62%), Postives = 194/237 (81.86%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E  Y  + + EI R V+ QE L++DVLVHGE ERN+MVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ +IQIDEAALREGLPLR+++ + YL WAV SFRIT  G+QD TQIHTHMCYS FNDII SI DMDADVITIE SRS+  LL  F +  +Y   IGPG
Sbjct:  463 EAGYRTAMRAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWIAYAQSLTRKPMKGMLTGPVTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DTFKYPNEIGPG 698
[Close]
BLAST of FC869109 vs. ExPASy Swiss-Prot
Match: METE_BURCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia cenocepacia (strain AU 1054) GN=metE PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.300e-91
Identity = 165/237 (69.62%), Postives = 194/237 (81.86%), Query Frame = 1 
Query:    1 EEEYVASFKEEINRVVKLQEELDIDVLVHGEPERNNMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINIIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGIQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSNENLLSVFREGVQYDAAIGPG 711
            E  Y  + + EI R V+ QE L++DVLVHGE ERN+MVEYFGEQL G+AF+  GWVQSYGSRCVKPPI++GD+SRPKAMTV W + AQS+T +PMKGMLTGPVTILNWSFVR+DQPR  +CYQ+ALAI++EV DLEKAG+ +IQIDEAALREGLPLR+++ + YL WAV SFRIT  G+QD TQIHTHMCYS FNDII SI DMDADVITIE SRS+  LL  F +  +Y   IGPG
Sbjct:  463 EAGYRTAMRAEIERSVREQESLELDVLVHGEAERNDMVEYFGEQLDGYAFSQFGWVQSYGSRCVKPPILFGDISRPKAMTVEWIAYAQSLTRKPMKGMLTGPVTILNWSFVRDDQPRAVSCYQLALAIREEVLDLEKAGVRVIQIDEAALREGLPLRRAQWSEYLKWAVESFRITANGVQDDTQIHTHMCYSEFNDIIASIADMDADVITIETSRSDMELLDAF-DTFKYPNEIGPG 698
The following BLAST results are available for this feature:
BLAST of FC869109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
METE_ARATH1.376e-12590.305-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC5.228e-12591.565-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESCR6.827e-12591.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO1.424e-12289.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MARAV2.005e-9268.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURA43.420e-9270.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCM7.619e-9270.045-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCJ1.300e-9169.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCH1.300e-9169.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURCA1.300e-9169.625-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionC31008F04EF AbioticL1 Citrus clementina cDNA clone C31008F04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869109 ID=FC869109; Name=FC869109; organism=Citrus clementina; type=EST; length=713bp
GAGGAAGAATATGTTGCTTCCTTCAAGGAGGAAATCAACAGGGTTGTCAA
ACTCCAAGAAGAGCTTGATATTGATGTTCTTGTCCATGGAGAGCCTGAGA
GGAACAACATGGTTGAGTACTTTGGAGAGCAATTATCAGGTTTCGCCTTC
ACTGCCAATGGGTGGGTGCAATCCTATGGATCTCGCTGTGTGAAGCCGCC
CATCATCTATGGTGATGTGAGCCGTCCCAAGGCTATGACCGTCTTCTGGT
CCTCCTTGGCTCAGAGCATGACTGCTCGCCCAATGAAGGGAATGCTTACT
GGCCCTGTCACCATTCTCAACTGGTCCTTTGTCAGAAATGACCAGCCCAG
ACATGAAACCTGCTACCAGATTGCTTTGGCCATCAAGGACGAAGTCGAGG
ATCTTGAGAAGGCAGGCATTAACATTATTCAAATTGATGAGGCTGCCTTG
AGGGAAGGATTGCCTCTCAGGAAATCTGAGCATGCTTTCTACTTGGACTG
GGCAGTCCACTCCTTCAGAATCACCAACTGCGGCATCCAGGACACTACCC
AGATCCACACCCACATGTGCTACTCCAACTTCAACGACATTATCCACTCA
ATTATTGACATGGATGCTGATGTGATCACCATTGAGAACTCTCGTTCTAA
TGAGAATCTCCTGTCAGTCTTCCGTGAGGGAGTCCAGTATGATGCTGCAA
TTGGCCCTGGCGT
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