FC869129

Overview
NameFC869129
Unique NameFC869129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5789 contig Ccv1_Contig5789:64..685. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 9.262e-53
Identity = 106/207 (51.21%), Postives = 132/207 (63.77%), Query Frame = 1
Query:    1 KAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            +AAA D V+TF+WV   ST G  TT + S L + G+ +  +L+T +             +ALGGASFNPTG AAFYA GV S SL S+ALR P            I E MP +Y+HMLGGPSL+VD HTGA AE +LTF+IT AVL+I++KGP++ I+KTW            G+AYTGP MNP    GWAYVN  H+TW+QFYVYW
Sbjct:    8 RAAAADAVVTFLWVLCVSTLGASTTAVTSYLRLQGVHFA-LLVTVSLLSVLLFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPAQYRHMLGGPSLKVDPHTGAGAELVLTFVITLAVLLIIVKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYW 213          
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP12_ARATH (Probable aquaporin SIP1-2 OS=Arabidopsis thaliana GN=SIP1-2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.063e-52
Identity = 100/208 (48.08%), Postives = 129/208 (62.02%), Query Frame = 1
Query:    1 KAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGG-PSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            K+A GD+V+TF+WV +S+TFG+ T  I SA+G HG+ W P++I+T             G  LGGASFNP G AAFY  GV SDSL S+A+R P            IME +P KYK  +GG PSLQ   H GAI+E +L+F +TF VL+I+L+GP+  + KT+            GS +T PFMNP    GWAY+ K H+TWD FYVYW
Sbjct:    5 KSALGDMVITFLWVILSATFGIQTAAIVSAVGFHGITWAPLVISTLVVFVSISIFTVIGNVLGGASFNPCGNAAFYTAGVSSDSLFSLAIRSPAQAIGAAGGAITIMEMIPEKYKTRIGGKPSLQFGAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATVSVFVVGSKFTRPFMNPAIAFGWAYIYKSHNTWDHFYVYW 212          
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 6.637e-51
Identity = 103/210 (49.05%), Postives = 128/210 (60.95%), Query Frame = 1
Query:    1 KAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGS---DSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            +AAA D  +TF+WV   ST G  T  + S L +H  +   +L+T +             +ALGGASFNPT  AAF+A G+ S    SL  +ALRFP            I E MP +YKHMLGGPSL+VDLHTGA AE +LTF+IT AVL I++KGP++ I+KTW            G+AYTGP MNP    GWAYVN  H+TW+QFYVYW
Sbjct:    7 RAAAADAAVTFLWVLCVSTLGASTAAVTSYLRIHEGIHYALLVTVSLLSVLLFAFNLLCDALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISELMPEQYKHMLGGPSLKVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYW 216          
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP11_ARATH (Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.669e-51
Identity = 99/207 (47.83%), Postives = 128/207 (61.84%), Query Frame = 1
Query:    1 KAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            K+A GD+++TF WV +S+TFG+ T  I SA     + W P++I T+                G ASFNPTG+AAFY  GV  D+L S+A+R P            IME++P KYKHM+GGPSLQVD+HTGAIAE +L+F ITFAVL+I+L+GP+  + KT+            GS YTGP MNP    GWAY+   H+TWD  YVYW
Sbjct:    6 KSAIGDMLMTFSWVVLSATFGIQTAAIISAGDFQAITWAPLVILTSLIFVYVSIFTVI---FGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMIGGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYW 209          
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP11_MAIZE (Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.252e-49
Identity = 102/208 (49.04%), Postives = 125/208 (60.10%), Query Frame = 1
Query:    1 KAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVH-GLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            +AAA D V+TF+WV  +S  G  T  + S LGV  G     +L+TT+              ALGGASFNPT  AA YA G+ S SL S+ALRFP            I E MP +YKH L GPSL+VD HTGA+AEG+LTF+IT  VL +++KGP++ ILKT             G+ YTGP MNP    GWAYVN WH+TW+Q YVYW
Sbjct:    8 RAAAADAVVTFLWVLCASALGASTAAVTSYLGVQEGAGHYALLVTTSLLSVLLFTFDLLCGALGGASFNPTDFAASYAAGLDSPSLFSVALRFPAQAAGAVGGALAISELMPAQYKHTLAGPSLKVDPHTGALAEGVLTFVITLTVLWVIVKGPRNVILKTLLLSTSIVSVILAGAEYTGPSMNPANAFGWAYVNNWHNTWEQLYVYW 215          
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP21_ARATH (Probable aquaporin SIP2-1 OS=Arabidopsis thaliana GN=SIP2-1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.017e-15
Identity = 58/202 (28.71%), Postives = 79/202 (39.11%), Query Frame = 1
Query:   16 DLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            DLVL+FMW++      +L   +   LG         ++                +A  G  +NP    A    G  S  + S+ +R P            I+   P   K    GP L V +H GA+ EG+LTF I    + +  K P S  +KTW            GS  TG  MNP   +GWAY    H T +   VYW
Sbjct:   10 DLVLSFMWIWAGVLVNIL---VHGVLGFSRTDPSGEIVRYLFSIISMFIFAYLQQATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFPEIGK----GPKLNVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGSDLTGGCMNPAAVMGWAYARGEHITKEHLLVYW 204          
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP21_ORYSJ (Aquaporin SIP2-1 OS=Oryza sativa subsp. japonica GN=SIP2-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 59/207 (28.50%), Postives = 76/207 (36.71%), Query Frame = 1
Query:   13 GDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPML--ITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMA--LRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            GDLV+  MWV   +   +      +  GV GL   P    +  A                GGAS+NP    A         SL   A  +R P            I   +P   K    G  L V +H GA+AEGL TF++    + +  K  +   +KTW             S  TG  MNP     WAY    H T+D   VYW
Sbjct:   19 GDLVVAAMWVCAGALVKL------AVYGVLGLGGRPEADAVKVALSLVYMFFFAWLEGFTGGASYNPLTVLAGALASRAGPSLYLFAAFVRMPAQVFGSILGVKLIRAALPKVGK----GAPLSVGVHHGALAEGLATFMVVIVSVTLKKKEMKGFFMKTWISSIWKMTFHLLSSDITGGVMNPASAFAWAYARGDHTTFDHLLVYW 215          
BLAST of FC869129 vs. ExPASy Swiss-Prot
Match: SIP21_MAIZE (Aquaporin SIP2-1 OS=Zea mays GN=SIP2-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.650e-12
Identity = 57/205 (27.80%), Postives = 74/205 (36.10%), Query Frame = 1
Query:   13 GDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDS--LLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPFMNPCQCLGWAYVNKWHDTWDQFYVYW 621
            GDL L   WV   +   +L   +   LG+ G       +  +              A GGAS+NP    A      G  +  L +   R P            I    P   K    G  L V  H GA+AEGL TF++    + +  K  +S  +KTW             S  TG  MNP     WAY    H T+D   VYW
Sbjct:   17 GDLALAAAWVCAGALVKLL---VYGGLGLGGRP-EAEAVKVSLSLVYMFLFAWLEAASGGASYNPLTVLAAALASHGGPAVYLFTAFARIPAQVIGAVLGVKLIQVTFPNVGK----GARLSVGAHHGALAEGLATFMVVMVSVTLKKKEMKSFFMKTWITSIWKNTIHLLSSDITGGIMNPASAFAWAYARGDHTTFDHLLVYW 213          
The following BLAST results are available for this feature:
BLAST of FC869129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SIP12_MAIZE9.262e-5351.21Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1[more]
SIP12_ARATH2.063e-5248.08Probable aquaporin SIP1-2 OS=Arabidopsis thaliana ... [more]
SIP11_ORYSJ6.637e-5149.05Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica G... [more]
SIP11_ARATH8.669e-5147.83Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1... [more]
SIP11_MAIZE1.252e-4949.04Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1[more]
SIP21_ARATH2.017e-1528.71Probable aquaporin SIP2-1 OS=Arabidopsis thaliana ... [more]
SIP21_ORYSJ1.598e-1228.50Aquaporin SIP2-1 OS=Oryza sativa subsp. japonica G... [more]
SIP21_MAIZE4.650e-1227.80Aquaporin SIP2-1 OS=Zea mays GN=SIP2-1 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC31008G12EF AbioticL1 Citrus clementina cDNA clone C31008G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869129 ID=FC869129; Name=FC869129; organism=Citrus clementina; type=EST; length=622bp
AAGGCAGCAGCGGGCGATCTGGTGCTGACGTTTATGTGGGTATTTGTGTC
GTCAACCTTCGGTGTTTTGACGACTGAGATTGCCTCCGCCCTTGGCGTTC
ACGGCCTTGTTTGGCCGCCCATGCTCATCACTACGGCCATTGTTTTTGTT
TTCGTTTTTATTTTTAATATCATCGGTGAAGCTCTTGGTGGAGCCAGTTT
CAATCCCACTGGTACCGCTGCGTTTTACGCTGTCGGTGTCGGCTCCGATA
GCCTCCTCTCCATGGCCCTCCGCTTCCCAGCCCAGGCAGCGGGTGCCGTG
GGCGGTGCATTGGCCATCATGGAGTACATGCCACCAAAGTACAAGCACAT
GCTTGGGGGTCCTTCTTTGCAAGTTGACTTGCATACCGGAGCCATTGCTG
AGGGGCTGTTGACTTTCCTTATTACCTTTGCTGTTCTTGTAATTATGCTC
AAGGGTCCTCAAAGCAATATTTTGAAGACCTGGTTGGTTGCTGTGGCAAC
TGTCGTCTTGATTGTTACAGGTTCCGCTTATACTGGACCTTTCATGAATC
CCTGCCAATGCCTTGGCTGGGCATATGTGAACAAGTGGCATGACACATGG
GATCAGTTTTACGTATACTGGA
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