FC869132

Overview
NameFC869132
Unique NameFC869132
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length691
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:65..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.249e-76
Identity = 136/225 (60.44%), Postives = 174/225 (77.33%), Query Frame = 3
Query:   27 SSLLVPCVQELVKNPALV-VPDRYIRPDQDSPLISDDTLIS-QIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFE--NGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            SS+LVP VQE+VK   +  VP RY+R DQD   + DD  +  +IP+IDM+ L S  +MDSE+ KLDF CKEWGFFQLVNHG+ ++FL+K+K E++ FFNL MEEKKK+WQRP ++EGFGQAFVVSE+QKLDWADLF     PV LRKPHLFPKLP   R+TLE+YS E++++A+ LI+KM   L IK EE+ + F+  +    MRMNYYPPCPQP++V+GL+PHS
Sbjct:   10 SSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHS 234          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39
Identity = 93/230 (40.43%), Postives = 129/230 (56.09%), Query Frame = 3
Query:    6 QKMVQIGSSLLVPCVQELVKNPALVVPDRYIRPD--QDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            + +  +G SL V  VQ L       +P+RY+RP+   D  +  D++L  +IPVID+  L  ++    ELAK    C +WGFFQL+NHG+    +EK+K + E FF L  +EK  Y Q P  MEG+GQAFV SEEQKLDWAD+  ++T PV  R    +P  P S RET+E YSMEL+ +A  L   M + L ++ E + +              P      + +GLSPHS
Sbjct:    3 KNLTGVGGSLPVENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSL--EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESEILTKPLRT-VFNREDELLPSMSSCGEGLGLSPHS 229          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.793e-27
Identity = 69/227 (30.40%), Postives = 117/227 (51.54%), Query Frame = 3
Query:   48 VQELVKNPALVVPDRYIRPDQDSPLISDDTLIS------QIPVIDMQSLHSEESMDSE--LAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMRE---FFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            V+ L K+  + +P  YIRP ++   I+D  L        Q+P ID++++ S++    E  + +L     +WG   L+NHG+    +E++KK  E FF+LS+EEK+KY   Q  G ++G+G     +   +L+W D F  +  P   R   ++PK P    E    Y+  L+ LA  +   +   L ++ + + +     E     M++NYYP CPQPE  +G+  H+
Sbjct:    7 VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHT 233          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.891e-24
Identity = 71/239 (29.71%), Postives = 115/239 (48.12%), Query Frame = 3
Query:   36 LVPCVQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSEESM------DSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGM-------RMNYYPPCPQPEKVMGLSPHS 689
            + P V+ L  +    +P  YIRP ++   I +           Q+P ID++ + SE+ +      +    +L     EWG   LVNHG+S   + ++K   E FFNL MEEK+KY   Q  G + G+G     +   +L+W D F  +  P   R   ++PK P         YS++L++LA  ++S +   L +++  +    E    GM       ++NYYP CPQPE  +G+  H+
Sbjct:    5 VAPRVESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRL----EKEVGGMEELLLQKKINYYPKCPQPELALGVEAHT 239          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.098e-23
Identity = 54/201 (26.87%), Postives = 106/201 (52.74%), Query Frame = 3
Query:   93 YIRPDQDSPLISDDTLISQIPVIDMQSLHSE-ESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            ++R + + P ++ +   ++IP+I +  L  + +    E+  K+   C++WG FQ+V+HG+ +  + ++ +    FF L  EEK +Y    G   GF  + V+  +  +DW +  +  + P++ R    +PK P   R T EVYS +L  L   L+  + E + ++  ++ +   +    + +NYYP CPQP+  +G+  H+
Sbjct:   19 FVRDEDERPKVAYNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHT 219          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 65/210 (30.95%), Postives = 110/210 (52.38%), Query Frame = 3
Query:   81 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHS-EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFN-LSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREF--FENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            +P  YIR + + P  +    ++ ++PVID+ ++   EE +  E+ +     KEWG FQ++NHG+    +E L+K  + FF  +  EEK+   ++PG   +EG+G +     E K  W D       P        +PK PPS RE  E Y+  L+ +A+ +   +   L ++  EM E    E+    +++NYYPPCP+P+  +G+  H+
Sbjct:   33 IPSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEKLVKEIVEAS---KEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHT 239          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 65/226 (28.76%), Postives = 112/226 (49.56%), Query Frame = 3
Query:   48 VQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSEESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMRE---FFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            V+ L K+    +P  Y+RP ++   I +           Q+P ID++ + SE+    E   +L     EWG   LVNHG+S   + ++K   E FF+  +EEK+KY   Q  G+++G+G     S   +L+W D F     P   R   ++PK P         Y+ +++ LA  +++ +   L +++  + +     E+    M++NYYP CPQPE  +G+  H+
Sbjct:   12 VESLAKSGIQAIPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHT 237          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 63/230 (27.39%), Postives = 112/230 (48.70%), Query Frame = 3
Query:   42 PCVQELVKNPALVVPDRYIRPDQDSPLISDDTLIS-------QIPVIDMQSLHS--EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            P V+EL ++    +P  Y+RP+++   I  + L         Q+P ID++ + S  EE       +L     +WG   L+NHG+    ++++K   + FF L +EEK+ Y   Q  G+++G+G     +   +L+W D F     P H     ++P  PP        Y+ +L+ LA  ++S +   L ++   + +     E+    M++N+YP CPQPE  +G   H+
Sbjct:   10 PRVEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLEKEVGGAEDLIVQMKINFYPKCPQPELALGWEAHT 239          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 63/223 (28.25%), Postives = 114/223 (51.12%), Query Frame = 3
Query:   57 LVKNPALV-----VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKL-DFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLR-------ETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGTAGMRMNYYPPCPQPEKVMGLSPH 686
            L+ NP+++     +P+++I PD + P I+   L   +P+ID+Q+L S+ S   + ++L    CK+ GFF +VNHG+S   +    +    FF++ + EK++  ++ G+  G+  +F      KL W +  S        R   +      +L        +  + Y   + +L+  ++  +G  L +K +  REFFE   + MR+NYYPPC +P+  +G  PH
Sbjct:   27 LIFNPSMLNLQANIPNQFIWPDDEKPSIN--VLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPH 247          
BLAST of FC869132 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.451e-23
Identity = 65/227 (28.63%), Postives = 113/227 (49.78%), Query Frame = 3
Query:   48 VQELVKNPALVVPDRYIRPDQDSPLISD------DTLISQIPVIDMQSLHSE-ESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMRE---FFENGTAGMRMNYYPPCPQPEKVMGLSPHS 689
            V+ L  +    +P  YIRP  +   I D      +    Q+P ID++ + S+ E + ++   KL     +WG   LVNHG+S   ++K++K  + FF+L +E+K+KY   Q  G ++G+G     +   +L+W D F     P   R   ++P+ P    E    Y+ +L+ LA  ++  +   L + +  + +     E     M++NYYP CPQPE  +G+  H+
Sbjct:   11 VETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHT 237          
The following BLAST results are available for this feature:
BLAST of FC869132 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
SRG1_ARATH7.249e-7660.44Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
NCS1_COPJA1.865e-3940.43S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_ARATH2.793e-2730.40Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_VITVI2.891e-2429.71Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
FNSI_PETCR1.098e-2326.87Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FLS_SOLTU1.435e-2330.95Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
LDOX_PETHY1.874e-2328.76Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_PERFR2.447e-2327.39Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
GAOX1_ARATH2.447e-2328.25Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
LDOX_MALDO5.451e-2328.63Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]

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Properties
Property NameValue
Genbank descriptionC31008H03EF AbioticL1 Citrus clementina cDNA clone C31008H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869132 ID=FC869132; Name=FC869132; organism=Citrus clementina; type=EST; length=691bp
AGGAACAAAAGATGGTCCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTT
CAAGAGTTGGTCAAGAATCCGGCGTTAGTTGTCCCCGACAGATACATACG
TCCAGATCAAGATTCACCCCTCATTTCTGATGATACTTTGATTTCACAGA
TACCAGTTATTGACATGCAAAGCTTACATTCTGAAGAATCAATGGATTCT
GAGTTAGCCAAGCTCGACTTCGTATGCAAAGAATGGGGTTTTTTCCAGCT
GGTAAATCATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAAAGAGG
TTGAGGGATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAG
CGTCCAGGGGATATGGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGA
ACAAAAGCTTGATTGGGCTGACCTTTTCTCCATGATGACTCTTCCAGTTC
ATCTGAGGAAACCACATTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAG
ACCTTGGAAGTTTACTCAATGGAATTAAAAACCCTAGCCGAGAACCTAAT
ATCGAAAATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAGAGAAT
TCTTTGAAAATGGNACTGCAGGAATGAGGATGAATTATTACCCTCCATGT
CCTCAGCCCGAGAAGGTTATGGGCCTGTCGCCGCATTCTGA
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