FC869133

Overview
NameFC869133
Unique NameFC869133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length514
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8757 contig Ccv1_Contig8757:366..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS_ARATH (Asparagine synthetase [glutamine-hydrolyzing] OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 4.643e-85
Identity = 143/171 (83.63%), Postives = 159/171 (92.98%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K IVVTV+GEIYNHE LR RL NHKFRTGSDC+VIAHLYEEYG +FVDMLDG+FSFVLLDTRDNSF+VARDAIG+TSLYIGWGLDGS+WISSE+KGLNDDCEHFE FPPGH YSSK GG K+WYNP W++E++PSTPY+PL +R+AFENAVIK LMTDVPFGVLLSGGLDS
Sbjct:   68 KTIVVTVNGEIYNHEELRKRLKNHKFRTGSDCEVIAHLYEEYGVDFVDMLDGIFSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFETFPPGHFYSSKLGGFKQWYNPPWFNESVPSTPYEPLAIRRAFENAVIKRLMTDVPFGVLLSGGLDS 238          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS2_PEA (Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3)

HSP 1 Score: 310.457 bits (794), Expect = 3.009e-84
Identity = 142/168 (84.52%), Postives = 155/168 (92.26%), Query Frame = 2
Query:   11 VVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            +VTV+GEIYNHE LR +L+NH FRTGSDCDVIAHLYEEYGE+FVDMLDG+FSFV LDTRDNS+IVARDAIG+TSLYIGWGLDGS+WISSE+KGLNDDCEHFE FPPGHLYSSK  G +RWYNP+WYSEAIPS PYDPL LR AFE AV+K LMTDVPFGVLLSGGLDS
Sbjct:   71 IVTVNGEIYNHEDLRKQLSNHTFRTGSDCDVIAHLYEEYGEDFVDMLDGIFSFVPLDTRDNSYIVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFECFPPGHLYSSKDSGFRRWYNPSWYSEAIPSAPYDPLALRHAFEKAVVKRLMTDVPFGVLLSGGLDS 238          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS1_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 5.133e-84
Identity = 141/171 (82.46%), Postives = 157/171 (91.81%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K I+VTV+GEIYNHE LR +L NH+FRTGSDCDVIAHLYEE+GENF+DMLDG+FSFVLLDTRDN+FIVARDAIG+TSLYIGWGLDGS+WISSE+KGLNDDCEHFE FPPGHLYSS+    +RWYNPTW+SE+IPS PYDPL +R AFE AVIK LMTDVPFGVLLSGGLDS
Sbjct:   68 KSIIVTVNGEIYNHEELRKQLPNHQFRTGSDCDVIAHLYEEHGENFMDMLDGIFSFVLLDTRDNTFIVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFEVFPPGHLYSSRERAFRRWYNPTWFSESIPSAPYDPLAVRHAFEKAVIKRLMTDVPFGVLLSGGLDS 238          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS_TRIVS (Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3)

HSP 1 Score: 308.145 bits (788), Expect = 1.493e-83
Identity = 144/171 (84.21%), Postives = 157/171 (91.81%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K+I VTV+GEIYNHE LR  L NHKFRTGSDCDVIAHLYEEYGENFV+MLDGMFSFVLLD+RDN+FI ARDA GITSLYIGWGLDGS+WISSELKGL+D+CE+FE FPPGH+YSSK+ G +RWYNP W+SEAIPSTPYDPLVLR AFE AVIK LMTDVPFGVLLSGGLDS
Sbjct:   68 KRIAVTVNGEIYNHEELRALLPNHKFRTGSDCDVIAHLYEEYGENFVEMLDGMFSFVLLDSRDNTFIAARDAFGITSLYIGWGLDGSVWISSELKGLHDECENFEVFPPGHVYSSKTEGFRRWYNPPWFSEAIPSTPYDPLVLRGAFEQAVIKRLMTDVPFGVLLSGGLDS 238          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS_BRAOL (Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2)

HSP 1 Score: 306.99 bits (785), Expect = 3.327e-83
Identity = 141/172 (81.98%), Postives = 160/172 (93.02%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKS-GGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K IVVTV+GEIYNHE LR  L NHKF TGSDCDVIAHLYEE+GENFVDMLDG+FSFVLLDTRDNSF+VARDA+G+TSLYIGWGLDGS+W+SSE+KGL++DCEHFEAFPPGHLYSSKS GG K+WYNP W++E++PSTPY+PL +R AFE+AVIK LMTDVPFGVLLSGGLDS
Sbjct:   68 KSIVVTVNGEIYNHEELRKGLKNHKFHTGSDCDVIAHLYEEHGENFVDMLDGIFSFVLLDTRDNSFMVARDAVGVTSLYIGWGLDGSLWVSSEMKGLHEDCEHFEAFPPGHLYSSKSGGGFKQWYNPPWFNESVPSTPYEPLAIRSAFEDAVIKRLMTDVPFGVLLSGGLDS 239          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS2_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 9.680e-83
Identity = 141/171 (82.46%), Postives = 156/171 (91.23%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            + I+VTV+GEI+NHE LR +L NHKFRTG DCDVIAHLYEE+GENFVDMLDG+FSFVLLDTRDNSF+VARDAIG+TSLYIG+GLDGS+WI+SELKGLNDDCEHFE FPPGHLYSSK    +RWYNP W+SEAIPS PYDPL LRQAFE A+IK LMTDVPFGVLLSGGLDS
Sbjct:   68 QSIIVTVNGEIFNHEELRKQLPNHKFRTGCDCDVIAHLYEEHGENFVDMLDGIFSFVLLDTRDNSFLVARDAIGVTSLYIGYGLDGSVWIASELKGLNDDCEHFELFPPGHLYSSKEKEFRRWYNPPWFSEAIPSAPYDPLALRQAFEKAIIKRLMTDVPFGVLLSGGLDS 238          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS_ASPOF (Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 1.651e-82
Identity = 139/171 (81.29%), Postives = 157/171 (91.81%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K IVVTV+GEIYNHE LR RL +HK+RTGSDC+VIAHLYEE+GE+FVDMLDGMFSFVLLDTR+N F+ ARDA+GIT LYIGWGLDGS+W+SSE+KGLNDDCEHFE FPPG+LYSS+SG  +RWYNP WY+E IPS PYDPLVLR+AFE+AVIK LMTDVPFGVLLSGGLDS
Sbjct:   68 KSIVVTVNGEIYNHEELRRRLPDHKYRTGSDCEVIAHLYEEHGEDFVDMLDGMFSFVLLDTRNNCFVAARDAVGITPLYIGWGLDGSVWLSSEMKGLNDDCEHFEVFPPGNLYSSRSGSFRRWYNPQWYNETIPSAPYDPLVLRKAFEDAVIKRLMTDVPFGVLLSGGLDS 238          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS1_PEA (Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3)

HSP 1 Score: 301.597 bits (771), Expect = 1.398e-81
Identity = 143/172 (83.14%), Postives = 155/172 (90.12%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEA-IPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K I+VTV+GEIYNHE LR +L NHKF T  DCDVIAHLYEE+GENFVDMLDG+FSFVLLDTRDNSFIVARDAIG+TSLYIGWGLDGS+WI+SELKGLND+CEHFE FPPGHLYSSK    +RWYNP W++EA IPSTPYDPLVLR AFE AVIK LMTDVPFGVLLSGGLDS
Sbjct:   68 KSIIVTVNGEIYNHEELRKQLPNHKFFTQCDCDVIAHLYEEHGENFVDMLDGIFSFVLLDTRDNSFIVARDAIGVTSLYIGWGLDGSVWIASELKGLNDECEHFEVFPPGHLYSSKEREFRRWYNPPWFNEAIIPSTPYDPLVLRNAFEKAVIKRLMTDVPFGVLLSGGLDS 239          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS_SANAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia aurantiaca GN=AND1 PE=2 SV=3)

HSP 1 Score: 294.278 bits (752), Expect = 2.232e-79
Identity = 134/171 (78.36%), Postives = 152/171 (88.89%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K I+VTV+GEIYNHE LR  L  H FRTGSDC+VIAHLYEE+GE+F+ MLDG+FSFVLLD+R+NSF+ ARDAIG+T LYIGWGLDGS+WISSE+KGLNDDCEHF+ FPPGHLYSSK G  KRWYNP W+SE IPS P+DPL LR+AFE+AVIK LMTDVPFGVLLSGGLDS
Sbjct:   68 KTIIVTVNGEIYNHEELRKGLPGHTFRTGSDCEVIAHLYEEHGESFIHMLDGIFSFVLLDSRNNSFVAARDAIGVTPLYIGWGLDGSVWISSEMKGLNDDCEHFKFFPPGHLYSSKEGSFKRWYNPPWFSEVIPSVPFDPLALRKAFEDAVIKRLMTDVPFGVLLSGGLDS 238          
BLAST of FC869133 vs. ExPASy Swiss-Prot
Match: ASNS_ORYSJ (Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 291.967 bits (746), Expect = 1.108e-78
Identity = 133/171 (77.78%), Postives = 153/171 (89.47%), Query Frame = 2
Query:    2 KKIVVTVHGEIYNHEALRDRLTNHKFRTGSDCDVIAHLYEEYGENFVDMLDGMFSFVLLDTRDNSFIVARDAIGITSLYIGWGLDGSIWISSELKGLNDDCEHFEAFPPGHLYSSKSGGLKRWYNPTWYSEAIPSTPYDPLVLRQAFENAVIKXLMTDVPFGVLLSGGLDS 514
            K +VVTV+GEIYNHE L+  L +HKF+T SDC+VIAHLYEEYGE FVDMLDGMF+FVLLDTRD SFI ARDAIGI  LY+GWGLDGS+W SSE+K L+DDCE F +FPPGHLYSSK+GGL+RWYNP W+SE+IPSTPY+PL+LRQ+FE A+IK LMTDVPFGVLLSGGLDS
Sbjct:   68 KSVVVTVNGEIYNHEELKANLKSHKFQTASDCEVIAHLYEEYGEEFVDMLDGMFAFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCERFISFPPGHLYSSKTGGLRRWYNPPWFSESIPSTPYNPLLLRQSFEKAIIKRLMTDVPFGVLLSGGLDS 238          
The following BLAST results are available for this feature:
BLAST of FC869133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
ASNS_ARATH4.643e-8583.63Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS2_PEA3.009e-8484.52Asparagine synthetase, root [glutamine-hydrolyzing... [more]
ASNS1_LOTJA5.133e-8482.46Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS_TRIVS1.493e-8384.21Asparagine synthetase [glutamine-hydrolyzing] OS=T... [more]
ASNS_BRAOL3.327e-8381.98Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS2_LOTJA9.680e-8382.46Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]
ASNS_ASPOF1.651e-8281.29Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS1_PEA1.398e-8183.14Asparagine synthetase, nodule [glutamine-hydrolyzi... [more]
ASNS_SANAU2.232e-7978.36Asparagine synthetase [glutamine-hydrolyzing] OS=S... [more]
ASNS_ORYSJ1.108e-7877.78Asparagine synthetase [glutamine-hydrolyzing] OS=O... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31008H04EF AbioticL1 Citrus clementina cDNA clone C31008H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869133 ID=FC869133; Name=FC869133; organism=Citrus clementina; type=EST; length=514bp
CAAGAAGATTGTTGTCACCGTGCATGGAGAAATTTACAATCATGAAGCTC
TCAGGGATCGTTTGACTAATCATAAGTTCCGAACTGGCAGTGATTGTGAT
GTTATTGCCCATCTGTATGAGGAGTATGGGGAAAATTTTGTGGACATGTT
GGATGGGATGTTTTCATTTGTGCTTTTGGATACCCGCGACAATAGCTTCA
TTGTTGCCCGTGATGCCATTGGAATCACCTCTCTGTACATAGGCTGGGGT
CTAGATGGATCTATTTGGATATCATCCGAACTCAAAGGTTTGAATGATGA
CTGTGAGCATTTCGAGGCCTTTCCTCCCGGTCACTTGTACTCGAGCAAAT
CAGGAGGACTAAAGAGATGGTATAATCCTACTTGGTATTCTGAGGCTATT
CCATCAACTCCATATGATCCGCTTGTTCTTAGACAGGCATTTGAAAATGC
TGTAATCAAAANGCTTATGACTGATGTGCCCTTTGGAGTCTTACTATCTG
GGGGCCTTGATTCA
back to top