FC869137

Overview
NameFC869137
Unique NameFC869137
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9462 contig Ccv1_Contig9462:1..671. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC2_MOUSE (Probable E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17
Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGA--YHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            + V+ IA G  ++ A+T +G +++WGRG +GRLG+GS  DE  P+ V     + LK + VA G+    +LA+ ++G VW WG   YG+LG  GS+    P +IE+         L+D         + +  V+ G   S+A+   G ++ WG
Sbjct:  552 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK---------LQD---------LDVIKVRCGSQFSIALTKDGQVYSWG 683          

HSP 2 Score: 88.1965 bits (217), Expect = 4.239e-17
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  129 KVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +V+ +AAG AH+  +T  G +++WG+G +GRLG+    D+L P  V      ++  +   +G   +L L DD +VW WG   YG+LG  GS+   VP  I+    +G                  +  V+ G   S+A+  +GA++ WG
Sbjct: 4094 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG------------------VVKVECGSQFSVALTKSGAVYTWG 4224          

HSP 3 Score: 80.8777 bits (198), Expect = 6.767e-15
Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +++  IA G +H+  LT  G +++WG G +GRLG+G  + +L P  V      ++  V   +    +LAL D+G V+ WG   +G+LG  GS    +P  IE+    G                  +C ++ G   SLA+  +G +W WG
Sbjct: 3100 KRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG------------------VCQIECGAQFSLALTKSGVVWTWG 3231          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC2_HUMAN (Probable E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17
Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGA--YHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            + V+ IA G  ++ A+T +G +++WGRG +GRLG+GS  DE  P+ V     + LK + VA G+    +LA+ ++G VW WG   YG+LG  GS+    P +IE+         L+D         + +  V+ G   S+A+   G ++ WG
Sbjct:  551 KHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV--AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK---------LQD---------LDVVKVRCGSQFSIALTKDGQVYSWG 682          

HSP 2 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 46/149 (30.87%), Postives = 75/149 (50.34%), Query Frame = 3
Query:  129 KVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +V+ +AAG AH+  +T  G +++WG+G +GRLG+    D+L P  V      ++  +   +G   +L L DD +VW WG   YG+LG  GS+   VP  I+    +G                  +  V+ G   S+A+  +GA++ WG
Sbjct: 4092 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLG------------------VVKVECGSQFSVALTKSGAVYTWG 4222          

HSP 3 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 46/150 (30.67%), Postives = 74/150 (49.33%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +++  IA G +H+ ALT  G +++WG G +GRLG+G  + +L P  V      ++  V   +    +LAL D+G V+ WG   +G+LG  GS    +P  IE+    G                  +C ++ G   SLA+  +G +W WG
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG------------------VCQIECGAQFSLALTKSGVVWTWG 3230          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 7.230e-17
Identity = 48/148 (32.43%), Postives = 72/148 (48.65%), Query Frame = 3
Query:  132 VIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            V  IA G AH+ A+T  G V +WG+G +GRLG+G   D+L P  V      +   +   +G   +L + DD +VW WG   YG+LG  GS+   +P  IE    +G                  +  V+ G   S+A+  +GA++ WG
Sbjct: 4190 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLG------------------VVKVECGSQFSVALTKSGAVYTWG 4319          

HSP 2 Score: 83.1889 bits (204), Expect = 1.364e-15
Identity = 46/150 (30.67%), Postives = 75/150 (50.00%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +K+  +A G +H+ A++  G +++WG G +GRLG+G  + +L P  V      ++  V   +    +LAL +DG+V+ WG   +G+LG  GS  S  P  IE+   IG                  +  ++ G   SLA+  AG +W WG
Sbjct: 3125 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG------------------VVQIECGAQFSLALTRAGEVWTWG 3256          

HSP 3 Score: 76.2554 bits (186), Expect = 1.667e-13
Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 3
Query:  132 VIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLL 587
            V ++  G +++ A+T  G + +WGRG + RLG+G+  D   P  V       +  V + +G  HSLAL  +G V+ WG   YG+LG    N SL P ++E                       ++  V AG   S+A+ + G L+ WG    L
Sbjct:  670 VQSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--------------------PRVQRVFAGSQFSVALSSEGQLYTWGKATCL 802          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC4_MOUSE (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.233e-16
Identity = 56/152 (36.84%), Postives = 74/152 (48.68%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLG-NGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQ--LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            + ++A+A GEAHTLAL   G+V++WG    G+LG  GSE  E   V  N      ++ V VA G YHSLAL+    V+CWG N YGQ  LG        P +I+  L                   I    V AGG  S  +  +GA++ WG
Sbjct:   84 QNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL------------------GIPFMQVAAGGAHSFVLTLSGAIFGWG 215          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC4_RAT (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 55/152 (36.18%), Postives = 74/152 (48.68%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLG-NGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQ--LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            + ++A++ GEAHTLAL   G+V++WG    G+LG  GSE  E   V  N      ++ V VA G YHSLAL+    V+CWG N YGQ  LG        P +I+  L                   I    V AGG  S  +  +GA++ WG
Sbjct:   84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSE--ECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL------------------GIPFMQVAAGGAHSFVLTLSGAIFGWG 215          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC4_HUMAN (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16
Identity = 52/151 (34.44%), Postives = 73/151 (48.34%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSG--SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            + ++A++ GEAHTLAL   G+V++WG    G+LG    S+E   V  N      ++ V VA G YHSLAL+    V+CWG N YGQLG          P +++  L                   I    V AGG  S  +  +GA++ WG
Sbjct:   84 QNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG-SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL------------------GIPFMQVAAGGAHSFVLTLSGAIFGWG 215          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: RCBT2_RAT (RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15
Identity = 49/150 (32.67%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  126 RKVIAIAAGEA-HTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +K+ +++ G   H +  T DG VF+WG   + +LGNG+ +  L P  ++   S + + + VA G+YHSL L  DG V+ WGYN+ GQ+G SGS +  P  I + +T    + +             + S+  G M S+A+ + G +++WG
Sbjct:   98 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNK-QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG-SGSTANQP--IPRRVTGCLQNKV-------------VMSIACGQMCSMAVVDTGEVYVWG 230          

HSP 2 Score: 82.8037 bits (203), Expect = 1.781e-15
Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 3
Query:  111 SGNLPRK-VIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGF-SGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            S NL  K VI +A G  H+L LT DG VF+WG    G++G+GS +++  P RV  G  +    + +A G   S+A+ D G V+ WGYN  GQLG  S  N   PC +                       I++  V  G   +L + + G ++ WG
Sbjct:  146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT-GCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAAL------------------QGIRVQRVACGYAHTLVLTDEGQIYAWG 282          

HSP 3 Score: 71.2478 bits (173), Expect = 5.362e-12
Identity = 52/160 (32.50%), Postives = 75/160 (46.88%), Query Frame = 3
Query:  111 SGNLPRKVI-AIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKA--GGMMSLAIDNAGALWMWGNC 578
            +G L  KV+ +IA G+  ++A+   G V+ WG    G+LG GS  ++  P RV     + ++   VA G  H+L L D+G ++ WG NSYGQLG    SN   P           P  +E D         +I  + A      S A    G ++MWG C
Sbjct:  199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV--AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP----------TPVVVEKD---------RIIEIAACHSAHTSAAKSQGGHVYMWGQC 337          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: RCBT2_MOUSE (RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15
Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 3
Query:  111 SGNLPRK-VIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGF-SGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            S NL  K VI +A G  H+L LT DG VF+WG    G++G+GS +++  P RV  G  +    + +A G   S+A+ D G V+ WGYN  GQLG  S  N   PC +                       I++  V  G   +L + + G ++ WG
Sbjct:  146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT-GCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAAL------------------QGIRVQRVACGYAHTLVLTDEGQIYAWG 282          

HSP 2 Score: 82.4185 bits (202), Expect = 2.326e-15
Identity = 48/150 (32.00%), Postives = 82/150 (54.67%), Query Frame = 3
Query:  126 RKVIAIAAGEA-HTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +K+ +++ G   H +  T DG VF+WG   + +LGNG+ +  L P  ++   S + + + VA G+YHSL L  DG V+ WGYN+ GQ+G SGS +  P  I + +T    + +             + ++  G M S+A+ + G +++WG
Sbjct:   98 KKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNK-QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVG-SGSTANQP--IPRRVTGCLQNKV-------------VMNIACGQMCSMAVVDTGEVYVWG 230          

HSP 3 Score: 70.0922 bits (170), Expect = 1.195e-11
Identity = 52/160 (32.50%), Postives = 74/160 (46.25%), Query Frame = 3
Query:  111 SGNLPRKVIA-IAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKA--GGMMSLAIDNAGALWMWGNC 578
            +G L  KV+  IA G+  ++A+   G V+ WG    G+LG GS  ++  P RV     + ++   VA G  H+L L D+G ++ WG NSYGQLG    SN   P           P  +E D         +I  + A      S A    G ++MWG C
Sbjct:  199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRV--AALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP----------TPVVVEKD---------RIIEIAACHSAHTSAAKTQGGHVYMWGQC 337          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15
Identity = 55/183 (30.05%), Postives = 86/183 (46.99%), Query Frame = 3
Query:  126 RKVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLTIGAPD-------SLEDDSKT--------NHK------------------APIKICSVKAGGMMSLAIDNAGALWMWG 572
            +KV +    + HTLA T +G VFSWG G +G+LG+G+ S + +P  +  G  +    V V+AG  HS A+ +DG ++ WG   +G+LG   SNS  +P +++    +G          +L  D +T        N K                    + I  V AG   SLA+ + G ++ WG
Sbjct:  458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQ-GPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG 639          

HSP 2 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 36/94 (38.30%), Postives = 58/94 (61.70%), Query Frame = 3
Query:  129 KVIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGS-VWCWGYNSYGQLGFSGSNS 407
            +V+ ++ G  H+  +T DG++F++G G +GRLG G+ S++  P RV   +  Q+    VA G  H+LA++ DGS VW +G   YG+LG   S +
Sbjct: 4135 EVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG--QVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226          
BLAST of FC869137 vs. ExPASy Swiss-Prot
Match: HERC3_HUMAN (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.838e-15
Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 3
Query:  132 VIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSESDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 572
            +I +A GE+H+LAL+  G++FSWG G  G+LG  +  D +   R+      Q   + V+ G +H LALA DG  + WG NS+GQLG            ++F +  +P       +      I +  V AGG  S A+  +GA++ WG
Sbjct:   86 IIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRL-IQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG----------KEFPSQASP------QRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWG 215          

HSP 2 Score: 68.9366 bits (167), Expect = 2.661e-11
Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 3
Query:  132 VIAIAAGEAHTLALTGDGRVFSWGRGMFGRLGNGSE-SDELFPVRVNFGDSEQLKFVGVAAGAYHSLALADDGSVWCWGYNSYGQLGFSGSNSL-VPCVIEQFLT 440
            ++ ++ G  H LAL  DG+ F+WG+   G+LG G E   +  P RV     E +    VAAG  HS AL+  G+V+ WG N+ GQLG S       PC ++   T
Sbjct:  139 ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR--SLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRT 241          
The following BLAST results are available for this feature:
BLAST of FC869137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
HERC2_MOUSE1.457e-1733.55Probable E3 ubiquitin-protein ligase HERC2 OS=Mus ... [more]
HERC2_HUMAN1.457e-1733.55Probable E3 ubiquitin-protein ligase HERC2 OS=Homo... [more]
HERC2_DROME7.230e-1732.43Probable E3 ubiquitin-protein ligase HERC2 OS=Dros... [more]
HERC4_MOUSE1.233e-1636.84Probable E3 ubiquitin-protein ligase HERC4 OS=Mus ... [more]
HERC4_RAT2.747e-1636.18Probable E3 ubiquitin-protein ligase HERC4 OS=Ratt... [more]
HERC4_HUMAN6.121e-1634.44Probable E3 ubiquitin-protein ligase HERC4 OS=Homo... [more]
RCBT2_RAT1.044e-1532.67RCC1 and BTB domain-containing protein 2 OS=Rattus... [more]
RCBT2_MOUSE1.781e-1533.33RCC1 and BTB domain-containing protein 2 OS=Mus mu... [more]
HERC1_HUMAN5.181e-1530.05Probable E3 ubiquitin-protein ligase HERC1 OS=Homo... [more]
HERC3_HUMAN8.838e-1534.01Probable E3 ubiquitin-protein ligase HERC3 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionC31008H08EF AbioticL1 Citrus clementina cDNA clone C31008H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869137 ID=FC869137; Name=FC869137; organism=Citrus clementina; type=EST; length=671bp
GGGAACATAAACTGCTGAAGTCCTGATAGATCATTCTGGTGAACTGTAAA
CAGTGTACCATTAAACTAAGATACAAATTGGTAATGGATTCGCCGGCATC
GTCGCCAGATTCCGGCAATTTACCCCGAAAAGTCATTGCCATTGCTGCCG
GCGAAGCTCATACTCTTGCTCTCACTGGGGATGGGCGCGTGTTCTCGTGG
GGAAGAGGAATGTTTGGTCGACTCGGTAACGGTTCTGAATCAGATGAGCT
GTTTCCGGTTCGGGTCAATTTTGGTGATTCTGAGCAGCTCAAGTTTGTGG
GAGTTGCTGCTGGTGCTTATCATAGCCTTGCTCTTGCAGATGATGGCTCA
GTCTGGTGCTGGGGTTACAACAGCTATGGCCAACTTGGTTTTAGCGGAAG
CAATTCCTTGGTACCTTGTGTGATTGAACAGTTCCTTACAATAGGTGCTC
CTGATTCTTTGGAAGATGATTCAAAAACTAACCATAAAGCACCAATAAAG
ATTTGTTCTGTCAAAGCTGGAGGAATGATGTCTCTGGCAATTGATAACGC
TGGAGCTTTGTGGATGTGGGGCAATTGCCCTCTGCTGGACAGCAGCACTG
AAGGTGGTTTCTCTCTTGTAAGCAGTTTCACTCCTAGTCCAGTCTGGGAT
TTTCATGGTCACACTGTTGTT
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