FC869142

Overview
NameFC869142
Unique NameFC869142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length578
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIFC3_HUMAN (Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 2.323e-31
Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 3
Query:  156 SSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIE 524
            S  + I   R  D         KL +VDL GSERV K+GA G  L E + IN SLSAL DVIAALR ++GHVP+RNSKLT +L+DSL   SK LM+V  SP E++  ET+ SL FA+R R +E
Sbjct:  647 SHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE 769          

HSP 2 Score: 39.2762 bits (90), Expect = 2.323e-31
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            D  G + + GLTE Q+         +  G   R+T +TN+NE SSRSH  +
Sbjct:  601 DGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALL 651          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIFC3_MOUSE (Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4)

HSP 1 Score: 117.087 bits (292), Expect = 3.939e-31
Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 3
Query:  156 SSLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIE 524
            S  + I   R  D         KL +VDL GSERV K+GA G  L E + IN SLSAL DVIAALR ++GHVP+RNSKLT +L+DSL   SK LM+V  SP E++  ET+ SL FA+R R +E
Sbjct:  645 SHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGNRLREAQHINRSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLRFAERVRSVE 767          

HSP 2 Score: 38.891 bits (89), Expect = 3.939e-31
Identity = 19/51 (37.25%), Postives = 27/51 (52.94%), Query Frame = 1
Query:    1 DAKGTVEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            D  G + + GLTE Q+         +  G   R+T +TN+NE SSRSH  +
Sbjct:  599 DGSGQLYVPGLTEFQVQSVDDINKVFEFGYNNRTTEFTNLNEHSSRSHALL 649          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3A_PONAB (Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3A PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.620e-25
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL-RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            + KL +VDL GSER  KTGATGQ L E   INLSLS L +VI+AL   K  HVPYRNSKLT++L+DSLG  SK +M  +  P + +  ETI +L +A RA+ I++   ++ED K
Sbjct:  243 MGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPK 356          

HSP 2 Score: 26.5646 bits (57), Expect = 1.620e-25
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:   85 GRRVRSTSWTNVNEASSRSH 144
            G + RS   TN+NE SSRSH
Sbjct:  202 GHKNRSVGATNMNEHSSRSH 221          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3A_MOUSE (Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3a PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.620e-25
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL-RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            + KL +VDL GSER  KTGATGQ L E   INLSLS L +VI+AL   K  HVPYRNSKLT++L+DSLG  SK +M  +  P + +  ETI +L +A RA+ I++   ++ED K
Sbjct:  243 MGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPK 356          

HSP 2 Score: 26.5646 bits (57), Expect = 1.620e-25
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:   85 GRRVRSTSWTNVNEASSRSH 144
            G + RS   TN+NE SSRSH
Sbjct:  202 GHKNRSVGATNMNEHSSRSH 221          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3A_MACFA (Kinesin-like protein KIF3A OS=Macaca fascicularis GN=KIF3A PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.620e-25
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL-RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            + KL +VDL GSER  KTGATGQ L E   INLSLS L +VI+AL   K  HVPYRNSKLT++L+DSLG  SK +M  +  P + +  ETI +L +A RA+ I++   ++ED K
Sbjct:  243 MGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPK 356          

HSP 2 Score: 26.5646 bits (57), Expect = 1.620e-25
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:   85 GRRVRSTSWTNVNEASSRSH 144
            G + RS   TN+NE SSRSH
Sbjct:  202 GHKNRSVGATNMNEHSSRSH 221          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3A_HUMAN (Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3A PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 1.620e-25
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  216 VSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL-RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            + KL +VDL GSER  KTGATGQ L E   INLSLS L +VI+AL   K  HVPYRNSKLT++L+DSLG  SK +M  +  P + +  ETI +L +A RA+ I++   ++ED K
Sbjct:  243 MGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPK 356          

HSP 2 Score: 26.5646 bits (57), Expect = 1.620e-25
Identity = 12/20 (60.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:   85 GRRVRSTSWTNVNEASSRSH 144
            G + RS   TN+NE SSRSH
Sbjct:  202 GHKNRSVGATNMNEHSSRSH 221          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KINH_SYNRA (Kinesin heavy chain OS=Syncephalastrum racemosum PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 6.022e-25
Identity = 55/111 (49.55%), Postives = 80/111 (72.07%), Query Frame = 3
Query:  222 KLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRR-KRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDL 551
            KL++VDL GSE+V KTGA+GQTL+E + IN SL+AL  VI AL   K  HVPYR+SKLT+IL++SLG  S+  ++++ SP   +  ET+ +L F  RA+ I++  +++ DL
Sbjct:  229 KLYLVDLAGSEKVGKTGASGQTLEEAKKINKSLTALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNEAETLSTLRFGARAKSIKNKAKVNADL 339          

HSP 2 Score: 30.0314 bits (66), Expect = 6.022e-25
Identity = 15/46 (32.61%), Postives = 24/46 (52.17%), Query Frame = 1
Query:   16 VEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFI 153
            V ++GL EV +    +      +G   R  ++TN+N  SSRSH  +
Sbjct:  166 VYVKGLLEVYVGSTDEVYEVMRRGSNNRVVAYTNMNAESSRSHSIV 211          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF7_DICDI (Kinesin-related protein 7 OS=Dictyostelium discoideum GN=kif7 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 7.803e-25
Identity = 56/131 (42.75%), Postives = 89/131 (67.94%), Query Frame = 3
Query:  159 SLMRITIFRHGDALEAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAALRRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDL 551
            S++ I + +   ++E+ +++SKL++VDL GSER  KTGA G  + E + INLSLSAL  VI AL     +VPYR+SKLT++L+DSLG  SK  ++++ SP   +  ETI +L F  RA+ I++  ++++ +
Sbjct:  230 SVLMIELSQQNLSMES-SKISKLFLVDLAGSERAHKTGAEGDRMQEAKNINLSLSALGKVINALTCGANYVPYRDSKLTRVLQDSLGGNSKTSLIINCSPSNNNEHETITTLQFGTRAKTIKNQPKINKKI 359          

HSP 2 Score: 29.261 bits (64), Expect = 7.803e-25
Identity = 14/48 (29.17%), Postives = 27/48 (56.25%), Query Frame = 1
Query:   16 VEIEGLTEVQIPDFTKARWWYNKGRRVRSTSWTNVNEASSRSHCFIYL 159
            + +EG++E+ I    +A  + N     R+ + T ++ ASSRSH  + +
Sbjct:  187 IYVEGISEIVITSIEEAYNFLNISNNNRAIASTKMSAASSRSHSVLMI 234          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KRP85_STRPU (Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP85 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.193e-24
Identity = 65/135 (48.15%), Postives = 87/135 (64.44%), Query Frame = 3
Query:  159 SLMRITIFRHGDAL--EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL-RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            ++  IT+ R    L  E    V KL MVDL GSER  KTGATGQ L E   INLSLS L +VI++L   K  H+PYRNSKLT++L+DSLG  +K +M  +  P E +  ETI +L +A RA+ I++  +++ED K
Sbjct:  219 AIFTITLERSDMGLDKEQHVRVGKLHMVDLAGSERQTKTGATGQRLKEATKINLSLSTLGNVISSLVDGKSTHIPYRNSKLTRLLQDSLGGNAKTVMCANIGPAEYNYDETISTLRYANRAKNIKNKAKINEDPK 353          
BLAST of FC869142 vs. ExPASy Swiss-Prot
Match: KIF3B_MOUSE (Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.332e-24
Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 3
Query:  201 EAKTEVSKLWMVDLGGSERVLKTGATGQTLDEGRAINLSLSALADVIAAL-RRKRGHVPYRNSKLTQILRDSLGDGSKVLMLVHASPCEEDVGETICSLSFAKRARGIESNRELSEDLK 554
            E    V KL +VDL GSER  KTGA G+ L E   INLSLSAL +VI+AL   K  H+PYR+SKLT++L+DSLG  +K +M+ +  P   +V ET+ +L +A RA+ I++   ++ED K
Sbjct:  233 ENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPK 351          

HSP 2 Score: 28.1054 bits (61), Expect = 1.332e-24
Identity = 13/27 (48.15%), Postives = 16/27 (59.26%), Query Frame = 1
Query:   79 NKGRRVRSTSWTNVNEASSRSHCFIYL 159
            N G + RS   TN+NE SSRSH    +
Sbjct:  195 NVGNQNRSVGATNMNEHSSRSHAIFVI 221          
The following BLAST results are available for this feature:
BLAST of FC869142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
KIFC3_HUMAN2.323e-3152.85Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC... [more]
KIFC3_MOUSE3.939e-3152.85Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc... [more]
KIF3A_PONAB1.620e-2552.63Kinesin-like protein KIF3A OS=Pongo abelii GN=KIF3... [more]
KIF3A_MOUSE1.620e-2552.63Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3... [more]
KIF3A_MACFA1.620e-2552.63Kinesin-like protein KIF3A OS=Macaca fascicularis ... [more]
KIF3A_HUMAN1.620e-2552.63Kinesin-like protein KIF3A OS=Homo sapiens GN=KIF3... [more]
KINH_SYNRA6.022e-2549.55Kinesin heavy chain OS=Syncephalastrum racemosum P... [more]
KIF7_DICDI7.803e-2542.75Kinesin-related protein 7 OS=Dictyostelium discoid... [more]
KRP85_STRPU1.193e-2448.15Kinesin-II 85 kDa subunit OS=Strongylocentrotus pu... [more]
KIF3B_MOUSE1.332e-2448.74Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3... [more]

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Properties
Property NameValue
Genbank descriptionC31009A02EF AbioticL1 Citrus clementina cDNA clone C31009A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869142 ID=FC869142; Name=FC869142; organism=Citrus clementina; type=EST; length=578bp
GATGCGAAGGGCACAGTGGAAATCGAGGGCCTGACAGAGGTGCAAATCCC
AGATTTTACAAAGGCCCGATGGTGGTACAATAAAGGGAGACGGGTTAGAT
CAACTTCATGGACTAATGTGAATGAGGCATCCAGCAGGTCACACTGTTTC
ATATATCTAGCTTAATGAGGATCACCATTTTCCGACATGGGGATGCCTTG
GAAGCCAAAACAGAAGTAAGCAAACTTTGGATGGTTGATCTTGGAGGCAG
CGAGCGGGTACTGAAAACAGGAGCCACTGGGCAAACACTGGATGAGGGAA
GGGCCATTAATCTCTCCCTTTCTGCACTGGCTGATGTTATTGCAGCTCTG
AGAAGGAAGAGAGGCCATGTGCCTTACAGAAATAGCAAGCTAACTCAGAT
CCTCAGAGATTCCCTGGGTGATGGTTCAAAGGTTTTGATGCTTGTTCATG
CAAGCCCATGTGAAGAAGATGTTGGGGAGACAATTTGTTCTTTGAGTTTT
GCCAAGCGAGCAAGGGGAATAGAGTCCAATAGGGAGCTATCAGAGGACTT
GAAGAAGCGAANGGAGATAAGAATGGCA
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