FC869152

Overview
NameFC869152
Unique NameFC869152
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6353 contig Ccv1_Contig6353:337..1016. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  141 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 524
            K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V   G +VS  K GD V G ++  + A+  + DQ  L+ +P+   L  AA LPV++GT+ +A+ HRA++
Sbjct:   36 KQPLTIQEVAPRPV--GPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAVLETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAILAVDHRARI 161          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20
Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 3
Query:  141 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 524
            K P+ + +  P P       VRV V    +N+A+ L   G+YQEKPPLPF PG ++SG V   G +VS  K GD V G +   S A+  + DQ  L+ +P+   L  AA LPV++GT+ +A+ HRA++
Sbjct:   36 KQPLTIQEVAPRPI--GPQEVRVDVHFCGINFADNLVCRGQYQEKPPLPFTPGMEFSGVVLEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAILAVDHRARI 161          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19
Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 3
Query:   75 RTKMEALVCRKLGDPTVSIHDEKSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQL 524
            R    A++C +LG P V + D+ S      TE +     ++ VRV V +  +N+A+ L+ +GKYQEKP LPFVPG++ SG V  VG  V++   GD V G     G  A+  V  Q+ L+ +P       AAAL +++GT+++ L H+A L
Sbjct:   36 RKSYRAVMCNELGKPLV-VEDKFS------TENL----GTSQVRVAVHSCGINFADILKCIGKYQEKPELPFVPGTEISGEVVEVGSKVTSLSKGDRVLGVCGQGGGMAEECVLPQTALWKIPSSLSFTQAAALAISYGTAYIGLKHKANL 175          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18
Identity = 50/126 (39.68%), Postives = 69/126 (54.76%), Query Frame = 3
Query:  141 KSPIVLSKTEPIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA 518
            K P+V+ +  P P       VRV V    +N+A+ L   G+YQE+  LPF PG ++SG V   G +VS  K GD V G       A+  + D   L+ +P+   L  AAALPV++GT+  AL HRA
Sbjct:   35 KRPLVIEEVTPRPV--QPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMVLETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAALPVSYGTAIFALEHRA 158          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QOR_MOUSE (Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.895e-13
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 3
Query:  171 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTV-CGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ 521
            P+PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS FK GD V C     G +A+F +A    ++P+P+  +    AAL + + T+  AL H A+
Sbjct:   31 PVPQ---SHQVLIKVHACGVNPVETYIRSGAYSRKPALPYTPGSDVAGIIESVGDKVSAFKKGDRVFCYSTVSGGYAEFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSAR 145          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QOR_RAT (Quinone oxidoreductase OS=Rattus norvegicus GN=Cryz PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.449e-13
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 3
Query:  171 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQ 521
            P PQ   S  V ++V A  +N        G Y  KP LP+ PGSD +G +++VG  VS FK GD V  F+ + G +A+F ++  +  +P+P+  D    AAL + + T+  AL H A+
Sbjct:   31 PAPQ---SHQVLIKVHACGVNPVETYIRSGTYSRKPALPYTPGSDVAGIIESVGDGVSAFKKGDRVFCFSTVSGGYAEFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSAR 145          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QOR_HUMAN (Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 3
Query:  171 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRA 518
            PIP+ +    V ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S FK GD V   + + G +A++ +A    ++ +P+  D    AA+ + + T++ AL+H A
Sbjct:   31 PIPKDHQ---VLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSA 144          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: QOR_PONAB (Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 39/121 (32.23%), Postives = 67/121 (55.37%), Query Frame = 3
Query:  171 PIPQLNSSTAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAAL-GSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVALVHRAQLSS 530
            PIP+ + +    ++V A  +N        G Y  KP LP+ PGSD +G ++AVG N S FK GD V   + + G +A++ +A    ++ +P+  D    AA+ + + T++ AL+H A + +
Sbjct:   31 PIPKDHQAL---IKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGGNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKA 148          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: ERYA2_SACER (Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 46/116 (39.66%), Postives = 63/116 (54.31%), Query Frame = 3
Query:  168 EPIPQLNS---STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVAL 506
            EP P +     +  VRV V+AT +N+ + L  LG Y +K  +    G++ +G V AVGP+V  F  GD V G    G+FA   V D   L  VP G     AAA+P+A+ T+H AL
Sbjct: 2839 EPAPDVEQPLRAGEVRVDVRATGVNFRDVLLALGMYPQKADM----GTEAAGVVTAVGPDVDAFAPGDRVLGLFQ-GAFAPIAVTDHRLLARVPDGWSDADAAAVPIAYTTAHYAL 2949          
BLAST of FC869152 vs. ExPASy Swiss-Prot
Match: VAT1_DANRE (Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio GN=vat1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 3
Query:  192 STAVRVRVKATSLNYANYLQILGKYQEKPPLPFVPGSDYSGTVDAVGPNVSNFKVGDTVCGFAALGSFAQFIVADQSELFPVPKGCDLLAAAALPVAFGTSHVAL 506
            S  V VRVK   LN+A+ +   G Y   P  P  PG + SG ++AVG  V++ KVGD V      G + + +V   +  F +P+G     AAALPV + T+++ L
Sbjct:   98 SGEVMVRVKMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDRKVGDKVLVLNRSGMWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMML 202          
The following BLAST results are available for this feature:
BLAST of FC869152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
QORL2_MOUSE4.170e-2039.84Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
QORL2_RAT7.114e-2040.63Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_NEMVE1.213e-1937.75Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORL2_BOVIN5.098e-1839.68Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
QOR_MOUSE2.895e-1336.44Quinone oxidoreductase OS=Mus musculus GN=Cryz PE=... [more]
QOR_RAT6.449e-1336.44Quinone oxidoreductase OS=Rattus norvegicus GN=Cry... [more]
QOR_HUMAN4.180e-1234.19Quinone oxidoreductase OS=Homo sapiens GN=CRYZ PE=... [more]
QOR_PONAB5.459e-1232.23Quinone oxidoreductase OS=Pongo abelii GN=CRYZ PE=... [more]
ERYA2_SACER7.130e-1239.66Erythronolide synthase, modules 3 and 4 OS=Sacchar... [more]
VAT1_DANRE1.588e-1137.14Synaptic vesicle membrane protein VAT-1 homolog OS... [more]

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Properties
Property NameValue
Genbank descriptionC31009A12EF AbioticL1 Citrus clementina cDNA clone C31009A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869152 ID=FC869152; Name=FC869152; organism=Citrus clementina; type=EST; length=679bp
GGAAAAATGTGAGCTTTTTTTCTGATAACGCCTTACATTTTCATAATAAA
TTGGAAACTTTGAAGTGCTCAACTCGAACGAAGATGGAGGCTCTGGTGTG
CAGGAAACTGGGCGATCCAACGGTCTCAATTCACGATGAAAAATCGCCGA
TTGTGTTGAGTAAAACTGAGCCAATTCCACAATTGAATTCTTCAACTGCA
GTTAGAGTCAGAGTGAAAGCCACCAGCTTGAACTACGCTAATTACTTGCA
GATATTGGGGAAATATCAAGAGAAACCACCATTGCCCTTCGTCCCCGGCT
CCGATTATTCGGGCACTGTTGATGCGGTGGGCCCCAATGTCTCAAATTTC
AAAGTGGGTGACACTGTTTGTGGATTTGCTGCCCTTGGCTCCTTTGCCCA
ATTCATCGTCGCTGATCAGTCAGAATTGTTTCCAGTGCCAAAGGGATGTG
ATTTGTTGGCTGCTGCTGCACTTCCTGTTGCATTTGGAACCTCACATGTT
GCTCTTGTTCATCGGGCCCAATTGTCCTCCGGTCAGGTCTTGCTTGTTCT
TGGTGCTGCTGGAGGTGTTGGTGTTGCCGCTGTTCAATTGGNCAGGTTTG
CGGAGCCACTATCATTGCCGTTGCTAGGGGTGCTGAAAAGATAAAATTTT
TGAAGTCATTGGGCGTCGATCATGTAGTT
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