FC869165

Overview
NameFC869165
Unique NameFC869165
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC869165 vs. ExPASy Swiss-Prot
Match: IQD32_ARATH (Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 66/197 (33.50%), Postives = 104/197 (52.79%), Query Frame = 3 
Query:   78 VSRIQYGGSECGTELSISSTLDSPD-RYEAGNTEHEHSAKVSENEICDPKSLNNLDVKASDASTIPTYDASHSIVGQPEKVDDVRNESVNSLVVIDAAAQQKPDNSAPDFHK-EPDLQTGHQMYRSYRSSPEASPRSHITVPESQGTPSSQV--SVKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSSTEQ 656
            V+  +  GSECGTELS++S+LD+ + + +A   E    AK+ E++         +++   DA+++ T      +    EKV++ ++E      V  +A   +P  S PD  K   + ++G Q Y    S    +P   +T+ ESQ TP+SQ   SVKA+  +S+KSGS +KRK    SK   S+P Q  G   +TEQ
Sbjct:  517 VTPAELSGSECGTELSVTSSLDTLEKKSDAEGAEPRVEAKLLEDDTFKTDQAELIEIDVKDATSMGT------VEDPKEKVENAKDE------VEISATHHEPVISTPDSKKRRAEDESGPQAYA--LSEGALTP---MTITESQATPASQASSSVKARKGKSEKSGSSQKRK---VSKKITSSPKQEIGTGEATEQ 693
The following BLAST results are available for this feature:
BLAST of FC869165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IQD32_ARATH3.931e-1533.50Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQ... [more]
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Properties
Property NameValue
Genbank descriptionC31009C02EF AbioticL1 Citrus clementina cDNA clone C31009C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869165 ID=FC869165; Name=FC869165; organism=Citrus clementina; type=EST; length=668bp
GGATTCAATGCCTCCATATTTCGTCTGGGGCCAATTCTTTAACCAGGACA
AAGAATCTCAGCATTGGAGAAAACTCAGTTTCAAGGATCCAATATGGTGG
CTCTGAATGTGGCACTGAACTTTCTATTTCTTCCACTCTTGATTCACCTG
ATAGATATGAAGCTGGAAACACAGAGCATGAACATTCAGCTAAAGTTTCC
GAGAATGAAATTTGTGATCCTAAAAGCTTAAATAACCTGGATGTTAAAGC
TAGTGATGCATCTACCATCCCAACTTATGATGCCTCCCACTCTATCGTCG
GTCAGCCTGAGAAGGTTGATGATGTTCGTAATGAATCTGTTAATTCACTT
GTAGTTATAGATGCCGCAGCACAGCAGAAGCCAGATAATAGTGCTCCTGA
TTTCCATAAAGAACCAGACTTACAAACTGGACATCAAATGTATAGATCAT
ACAGGTCATCACCAGAAGCTTCTCCTAGAAGCCACATAACCGTTCCAGAA
TCCCAAGGAACACCTTCAAGTCAGGTCTCAGTGAAAGCTAAAAACAACAG
ATCCGATAAGAGTGGATCTTACCGAAAGCGCAAGCCCCTCTCTGCAAGTA
AGGGTTCTCCATCAAATCCAAGTCAAAACTCTGGTGCAAGAAGTAGTACA
GAACAATTGCCAAAAAAT
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