FC869167

Overview
NameFC869167
Unique NameFC869167
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9479 contig Ccv1_Contig9479:6..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869167 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27
Identity = 84/220 (38.18%), Postives = 103/220 (46.82%), Query Frame = 2
Query:  116 VASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTS--NGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEA 673
            VA  AD++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EA
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEA 236          
BLAST of FC869167 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.559e-27
Identity = 58/86 (67.44%), Postives = 67/86 (77.91%), Query Frame = 2
Query:  416 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEA 673
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEA 270          
BLAST of FC869167 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.424e-12
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 2
Query:  455 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEA 673
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTA 124          
BLAST of FC869167 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.411e-12
Identity = 36/65 (55.38%), Postives = 43/65 (66.15%), Query Frame = 2
Query:  479 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEA 673
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAA 85          
BLAST of FC869167 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  431 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSV 652
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSI 115          
The following BLAST results are available for this feature:
BLAST of FC869167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RD22_ARATH2.047e-2738.18Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ4.559e-2767.44BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP2_ORYSJ1.424e-1250.68BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP6_ORYSJ5.411e-1255.38BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP1_ORYSJ5.982e-1147.30BURP domain-containing protein 1 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionC31009C04EF AbioticL1 Citrus clementina cDNA clone C31009C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869167 ID=FC869167; Name=FC869167; organism=Citrus clementina; type=EST; length=673bp
AAGCCTAGATTTTAGATCCATACTATCTTGTATTCTGGGTGTCTTTTAAA
ACATACTCAAAGCTATAATGGAGTTTCACTTGTTGCCCATCCTTGCTTTC
CTCAGTCTAGCACTGGTAGCAAGTCATGCTGACATTTCTCCTGAGCTTTA
CTGGAAAACTGTACTGCCAAATTCCCCGATGCCAAAAGCTGTCAAAGATC
TTCTACAGCCAGATGTGCTGGAAGACAAAAGCACCTCTGTCAACGTAGGG
AAGGGTGGTGTCAATGTGGATGCAGGGAAAGGAAAGCCCGGTGGTGGCAC
CCATGTGAATGTTGGGGGTAAGGGCGTTGGTGTAAACACTGGAAAGCCTG
ACAAAAGAACCAGTGTTGGTGTTGGCAAAGGAGGAGTATCCGTAAGTACA
GGACACAAGGGAAAGCCAGTTTATGTTGGAGTAAGCCCATTCAACTATGT
ATATGCTGCAAATGAGAACCAACTCCATGATGACCCGAATACAGCTCTTT
TCTTCTTGGAAAAGGACTTGCATCCTGGCATGAAGATGAACTTGCACTTC
ACTCAAACTTCAAATGGAGCAACTTTCTTATCTCGCCAAGCTGCCAAATC
AACTCCTTTCTCGTCTGACAAATTGCCTGAGATCTTTAACCAGTTTTCCG
TGAAACCTGGATCAGTTGAAGCT
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