FC869176

Overview
NameFC869176
Unique NameFC869176
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9471 contig Ccv1_Contig9471:1..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.364e-32
Identity = 71/194 (36.60%), Postives = 112/194 (57.73%), Query Frame = 2
Query:  158 RVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTT--YEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            RV+ L+ SGI +IP+ YI+P  +  N     +++ ++    +P IDL+ I S++E VR +    +  A  DW    +VNHG+S ELM + R+  + FF+LP+E K++YAN   +   +GYGS+L      +L+W DYFF    P   R+   WP  P    E  +EY ++L +L   ++KVLS+ LGL E + +
Sbjct:   10 RVETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLE 203          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.558e-31
Identity = 73/198 (36.87%), Postives = 113/198 (57.07%), Query Frame = 2
Query:  152 IVRVQALSESGIKSIPERYIKPS--LQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTT--YEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            + RV++L++SGI SIP+ YI+P   L+  N V   ++  D  Q+  P IDL++I S+DE +R   +  +  A  DW    ++NHG+  +LM++ ++   EFF+L +E K++YAN   T   +GYGS+L      +L+W DYFF    P   R+   WP  P    E  SEY + L  L   + K LS+ LGL+ D+ +
Sbjct:    4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQV--PTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLE 199          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.495e-29
Identity = 72/198 (36.36%), Postives = 106/198 (53.54%), Query Frame = 2
Query:  158 RVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLS-C---ISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYE--GYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            RV++LS SGI+SIP+ YI+P  +  +     + +  D    +P IDL+ I S DE VR E    C   +  A  +W    +VNHG+S +L+ + +     FFNLP+E K++YAN   + +  GYGS+L      +L+W DYFF    P   R+   WP  P        EY  KL  L   ++ VLS+ LGL+E + +
Sbjct:    8 RVESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLE 205          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.690e-29
Identity = 67/192 (34.90%), Postives = 105/192 (54.69%), Query Frame = 2
Query:  149 PIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQED 724
            P+  VQ L+   +K++P RY++P L+      H D    D+ + IP+IDL  +   D+    + L+   +AC DW FFQ++NHGV  E++++ +    +FF LP + K  Y   P   EGYG      +  KLDW+D  FL   P   RN + WP+ P S RE + +Y  +L K+   L  +++ NLGL+ +
Sbjct:   13 PVENVQVLAGKELKNLPNRYVRPELE------HDDVVPIDNSLEIPVIDLSRLL--DQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGLESE 196          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.117e-27
Identity = 65/194 (33.51%), Postives = 105/194 (54.12%), Query Frame = 2
Query:  158 RVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTT--YEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            RV++L++SGI++IP+ Y++P  +        + +  D    +P IDL+ I S D+ +R E    +  A  +W    +VNHG+S EL+ + +     FF+ P+E K++YAN       +GYGS+L      +L+W DYFF    P   R+   WP  P       SEY +++  L   ++ VLSI LGL+E + +
Sbjct:   11 RVESLAKSGIQAIPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIR-EKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGLEEGRLE 203          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: LDOX_PERFR (Leucoanthocyanidin dioxygenase OS=Perilla frutescens GN=ANS PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.071e-27
Identity = 65/198 (32.83%), Postives = 106/198 (53.54%), Query Frame = 2
Query:  149 PIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQ-INIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPT--TYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            P  RV+ L+ SG+ +IP+ Y++P  +  + + +   +   S+   +P IDL+ + S DE  R +    +  A  DW    ++NHG+  EL+ + +   +EFF LP+E K+ YAN       +GYGS+L      +L+W DYFF    P    +   WP+ PP      SEY ++L  L   ++ VLSI LGL++ + +
Sbjct:    8 PSPRVEELARSGLDTIPKDYVRPEEELKSIIGNILAEEKSSEGPQLPTIDLEEMDSRDEEGRKKCHEELKKAATDWGVMHLINHGIPEELIDRVKAAGKEFFELPVEEKEAYANDQAAGNVQGYGSKLANNASGQLEWEDYFFHCVYPEHKTDLSIWPTKPPDYIPATSEYAKQLRALATKILSVLSIGLGLEKGRLE 205          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.091e-23
Identity = 55/190 (28.95%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  164 QALSESGIKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            + + E  I ++P RY++    +       D DFD  +I IP+ID++ + S+  +  +  +  +  AC++W FFQ+VNHG+    + + +   ++FFNLP+E K+++   P   EG+G    V +  KLDW+D FF    P  LR P  +P LP   R+ +  Y  ++  +  +L+  ++  L ++ ++ +
Sbjct:   19 EMVKEKTITTVPPRYVRSDQDKTEV----DDDFD-VKIEIPIIDMKRLCSS--TTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELE 201          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.731e-23
Identity = 61/195 (31.28%), Postives = 94/195 (48.21%), Query Frame = 2
Query:  149 PIVRVQALSESGIKSIPERYIKPSLQRPNSVKHGD----RDFDDSQINIPLIDLQSIY--SNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTT--YEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINL 709
            P  RV+ALS SG+ +IP  Y++P+ +R       D       D +   IP++D+      S+ +  R+E +  +  A  DW    +  HG+  ELM + R     FF LP++ K+ YAN P     +GYGSRL      + +W DY F    P  L +   WP+ PP       ++G +   L   L+ +LS+ L
Sbjct:   10 PAARVEALSLSGLSAIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGL 204          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: FLS_EUSGR (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma grandiflorum GN=FLS PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.770e-22
Identity = 67/199 (33.67%), Postives = 103/199 (51.76%), Query Frame = 2
Query:  152 IVRVQALSESG--IKSIPERYIKPSLQRPN-SVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYAN--SPTTYEGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            + RVQ ++     I +IP  YI+   ++P  S  HG        + +P+IDL       +S   + +  +S A ++W  FQVVNHG+  E++++ +E+ + FF LP E K+  A      + EGYG+RL  E   K  W D+ F    P S  N Q WP  PP+ RE   EY ++L  +   L K LS+ L L+ + F+
Sbjct:    3 VQRVQEIASLSKVIDTIPAEYIRSENEQPVISTVHG------VVLEVPVIDLS------DSDEKKIVGLVSEASKEWGIFQVVNHGIPNEVIRKLQEVGKHFFELPQEEKELIAKPEGSQSIEGYGTRLQKEVDGKKGWVDHLFHKIWPPSAINYQFWPKNPPAYREANEEYAKRLQLVVDNLFKYLSLGLDLEPNSFK 189          
BLAST of FC869176 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21
Identity = 64/199 (32.16%), Postives = 104/199 (52.26%), Query Frame = 2
Query:  152 IVRVQALSESG--IKSIPERYIKPSLQRPNSVKHGDRDFDDSQINIPLIDLQSIYSNDESVRNETLSCISNACRDWAFFQVVNHGVSPELMKQTREMWREFFNLPLELKQEYANSPTTY---EGYGSRLGVEKGAKLDWSDYFFLHFMPHSLRNPQQWPSLPPSCRELVSEYGEKLVKLCGVLMKVLSINLGLQEDQFQ 733
            + RVQA+S+    + +IP  YI+   ++P              + +P+IDL S  + +E++    +  I+ A R+W  FQVVNHG+  + + + +++ +EFF LP + K+  A  P  Y   EGYG++L  E G K  W D+ F    P S  N   WP+ PP  RE   EY   L  +   L + LS+ +GL++ + +
Sbjct:    3 VERVQAISKMSRCMDTIPSEYIRSESEQPAVTT-----MQGVVLQVPVIDLGSSNNTEENL----VELIAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAK-PEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELK 191          
The following BLAST results are available for this feature:
BLAST of FC869176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
LDOX_MALDO9.364e-3236.60Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_ARATH3.558e-3136.87Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_VITVI1.495e-2936.36Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
NCS1_COPJA9.690e-2934.90S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
LDOX_PETHY3.117e-2733.51Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_PERFR4.071e-2732.83Leucoanthocyanidin dioxygenase OS=Perilla frutesce... [more]
SRG1_ARATH2.091e-2328.95Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
LDOX_MAIZE2.731e-2331.28Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FLS_EUSGR1.770e-2233.67Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
FLS_PETCR1.957e-2132.16Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]

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Properties
Property NameValue
Genbank descriptionC31009D02EF AbioticL1 Citrus clementina cDNA clone C31009D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869176 ID=FC869176; Name=FC869176; organism=Citrus clementina; type=EST; length=735bp
GGAGAACCAAAACCAGAGCTAGTCCATTGCTCATCTTTCTCTCTCTGTCT
CTATCAAAAATACCCTATAAGAGAGATATATACATATATATTTTAAAAAC
GTTCAAAACAATTTAGAGACAATGAACTGCCTTCAGAGTTGGCCTGAACC
AATTGTCAGAGTCCAAGCTTTATCCGAAAGTGGCATAAAATCAATCCCGG
AAAGGTACATCAAGCCATCACTCCAAAGGCCTAATTCAGTGAAACATGGT
GACCGTGATTTTGATGACTCTCAAATCAACATTCCACTTATTGATCTTCA
GAGCATATACAGCAACGACGAGAGTGTCCGCAATGAGACGCTGAGTTGCA
TCTCCAACGCGTGCCGCGACTGGGCGTTTTTCCAAGTTGTGAACCATGGG
GTGAGCCCCGAACTGATGAAGCAAACGAGGGAGATGTGGCGCGAGTTCTT
CAATCTCCCGCTTGAGCTCAAACAGGAGTATGCAAACTCGCCGACGACAT
ACGAAGGCTACGGTAGCCGCTTGGGCGTCGAGAAAGGAGCAAAGCTTGAT
TGGAGTGACTACTTTTTCCTTCACTTCATGCCTCATTCCCTCAGGAATCC
CCAACAGTGGCCGTCTCTCCCACCTTCATGCAGGGAATTAGTATCGGAAT
ATGGTGAAAAATTGGTGAAGCTGTGCGGAGTTCTGATGAAGGTACTATCA
ATAAATCTCGGACTACAAGAAGACCAATTTCAAAT
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