FC869182

Overview
NameFC869182
Unique NameFC869182
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length633
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC869182_ssr27 microsatellite FC869182_ssr27:27..48. BLAST: Citrus ESTs to Prunus persica proteins V1
FC869182_ssr18 microsatellite FC869182_ssr18:18..29. BLAST: Citrus ESTs to Prunus persica proteins V1
FC869182_ssr30 microsatellite FC869182_ssr30:30..45. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig12399 contig Ccv1_Contig12399:103..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14310_SOLLC (14-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10 PE=2 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 3.076e-83
Identity = 156/186 (83.87%), Postives = 168/186 (90.32%), Query Frame = 1
Query:   76 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            MA  +P+NL+REQ +YLAKLAEQAERYEEMV+FM KLV+ STPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHV LVKEYR KVE ELS VCA IL+LLE+NL+PSAT SESKVFYLKMKGDY+RY+AEFKIGDERK AAEDTM SYKAAQ+IA  DL PTHPIRLGLALN
Sbjct:    1 MAALIPENLSREQCLYLAKLAEQAERYEEMVQFMDKLVLNSTPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVHLVKEYRGKVENELSQVCAGILKLLESNLVPSATTSESKVFYLKMKGDYYRYLAEFKIGDERKQAAEDTMNSYKAAQEIALTDLPPTHPIRLGLALN 186          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 1433B_SOYBN (14-3-3-like protein B (Fragment) OS=Glycine max GN=GF14B PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.018e-83
Identity = 153/180 (85.00%), Postives = 168/180 (93.33%), Query Frame = 1
Query:   94 DNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            + L REQYVYLA ++EQAERYEEMVEFMQK+VVGSTPA+ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN++HVSLVK YRSKVE EL+ VCA+IL LL++NL+PSA+ASESKVFYLKMKGDYHRY+AEFK+GDERK A EDTM SYKAAQDIA ADL PTHPIRLGLALN
Sbjct:    2 EGLNREQYVYLANVSEQAERYEEMVEFMQKVVVGSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDDHVSLVKHYRSKVENELTQVCATILSLLDSNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTATEDTMLSYKAAQDIASADLPPTHPIRLGLALN 181          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14338_ARATH (14-3-3-like protein GF14 kappa OS=Arabidopsis thaliana GN=GRF8 PE=2 SV=2)

HSP 1 Score: 304.679 bits (779), Expect = 2.604e-82
Identity = 156/186 (83.87%), Postives = 172/186 (92.47%), Query Frame = 1
Query:   76 MATTVPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            MATT    L+R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKNEEHVSLVK+YRSKVE ELS +C+ ILRLL+++LIPSATASESKVFYLKMKGDYHRY+AEFK GDERK AAEDTM +YKAAQD+A ADLAPTHPIRLGLALN
Sbjct:    1 MATT----LSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATASESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLALN 182          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14336_ARATH (14-3-3-like protein GF14 lambda OS=Arabidopsis thaliana GN=GRF6 PE=1 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 4.911e-81
Identity = 151/178 (84.83%), Postives = 166/178 (93.26%), Query Frame = 1
Query:  100 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            L R+QYVY+AKLAEQAERYEEMV+FM++LV G+TPA ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEE RKN+EHVSLVK+YRSKVE ELS VC+ IL+LL+++LIPSA ASESKVFYLKMKGDYHRYMAEFK GDERK AAEDTM +YKAAQDIA AD+APTHPIRLGLALN
Sbjct:    5 LGRDQYVYMAKLAEQAERYEEMVQFMEQLVTGATPAEELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNDEHVSLVKDYRSKVESELSSVCSGILKLLDSHLIPSAGASESKVFYLKMKGDYHRYMAEFKSGDERKTAAEDTMLAYKAAQDIAAADMAPTHPIRLGLALN 182          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14331_SOLLC (14-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 PE=3 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 6.003e-79
Identity = 150/182 (82.42%), Postives = 169/182 (92.86%), Query Frame = 1
Query:   88 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            +P+NLTREQ +YLAKLAEQAERYEEMV+FM KLV+GS  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKN+EHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA+A ESKVFYLKMKGDY+RY+AEFK+G+ERK AAEDTM +YKAAQDIA A+LAPTHPIRLGLALN
Sbjct:    3 LPENLTREQCLYLAKLAEQAERYEEMVKFMDKLVIGSG-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSASAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIAVAELAPTHPIRLGLALN 183          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 1433D_TOBAC (14-3-3-like protein D OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 6.638e-78
Identity = 150/182 (82.42%), Postives = 166/182 (91.21%), Query Frame = 1
Query:   88 VPDNLTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            VP+NLTREQ +YLAKLAEQAERYEEMV+FM +LV  S  ++ELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHV LVK+YRSKVE ELSDVCA IL++L+  LIPSA A ESKVFYLKMKGDY+RY+AEFK+G+ERK AAEDTM +YKAAQDIA A+LAPTHPIRLGLALN
Sbjct:    3 VPENLTREQCLYLAKLAEQAERYEEMVKFMDRLVAVSA-SSELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVVLVKDYRSKVESELSDVCAGILKILDQYLIPSAAAGESKVFYLKMKGDYYRYLAEFKVGNERKEAAEDTMLAYKAAQDIALAELAPTHPIRLGLALN 183          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 4.607e-71
Identity = 135/178 (75.84%), Postives = 157/178 (88.20%), Query Frame = 1
Query:  100 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            ++RE+ VY+AKLAEQAERYEEMVE+M+K V  +    ELTVEERNLLSVAYKNVIG+ RA+WRIVSSIEQKEEGR NEEHV+L+KEYR K+E ELS +C  IL+LL+++L+PS+TA+ESKVFYLKMKGDYHRY+AEFK G ERK AAE TM +YKAAQDIA ADLAPTHPIRLGLALN
Sbjct:    1 MSREENVYMAKLAEQAERYEEMVEYMEK-VAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALN 177          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.135e-69
Identity = 132/178 (74.16%), Postives = 153/178 (85.96%), Query Frame = 1
Query:  100 LTREQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            + RE+ VY+AKLAEQAERYEEMV+FM+K V  S  + ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NEEHV  +KEYRSK+E ELSD+C  IL+LL++NLIPSA+  +SKVFYLKMKGDYHRY+AEFK G ERK AAE T+ +YKAAQDIA  +LAPTHPIRLGLALN
Sbjct:    1 MAREENVYMAKLAEQAERYEEMVQFMEK-VSTSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVKCIKEYRSKIESELSDICDGILKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALN 177          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 2.528e-69
Identity = 129/176 (73.30%), Postives = 152/176 (86.36%), Query Frame = 1
Query:  106 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK AAE+T+ +YKAAQDIA A+LAPTHPIRLGLALN
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALN 180          
BLAST of FC869182 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.528e-69
Identity = 129/176 (73.30%), Postives = 152/176 (86.36%), Query Frame = 1
Query:  106 REQYVYLAKLAEQAERYEEMVEFMQKLVVGSTPAAELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEEHVSLVKEYRSKVEKELSDVCASILRLLEANLIPSATASESKVFYLKMKGDYHRYMAEFKIGDERKAAAEDTMQSYKAAQDIAGADLAPTHPIRLGLALN 633
            RE+ VY+AKLAEQAERYEEMVEFM+K+V  +  A ELTVEERNLLSVAYKNVIG+ RA+WRI+SSIEQKEE R NE+HV+ +KEYRSK+E EL+ +C  IL+LL++ LI SA   +SKVFYLKMKGDYHRY+AEFK G ERK AAE+T+ +YKAAQDIA A+LAPTHPIRLGLALN
Sbjct:    5 REENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALN 180          
The following BLAST results are available for this feature:
BLAST of FC869182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14310_SOLLC3.076e-8383.8714-3-3 protein 10 OS=Solanum lycopersicum GN=TFT10... [more]
1433B_SOYBN4.018e-8385.0014-3-3-like protein B (Fragment) OS=Glycine max GN... [more]
14338_ARATH2.604e-8283.8714-3-3-like protein GF14 kappa OS=Arabidopsis thal... [more]
14336_ARATH4.911e-8184.8314-3-3-like protein GF14 lambda OS=Arabidopsis tha... [more]
14331_SOLLC6.003e-7982.4214-3-3 protein 1 OS=Solanum lycopersicum GN=TFT1 P... [more]
1433D_TOBAC6.638e-7882.4214-3-3-like protein D OS=Nicotiana tabacum PE=2 SV... [more]
14333_ORYSJ4.607e-7175.8414-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14332_SOLLC1.135e-6974.1614-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
14336_SOLLC2.528e-6973.3014-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU2.528e-6973.3014-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC31009D08EF AbioticL1 Citrus clementina cDNA clone C31009D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869182 ID=FC869182; Name=FC869182; organism=Citrus clementina; type=EST; length=633bp
CGCAACGCAAGCCGTCCGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCAT
CACACTTTCAGAGCCTGTGAAAAAGATGGCGACAACAGTTCCGGACAACC
TGACGAGAGAGCAGTACGTGTACTTAGCCAAGCTAGCCGAGCAAGCCGAG
CGTTACGAAGAGATGGTGGAGTTCATGCAGAAGCTGGTTGTCGGCTCGAC
TCCAGCCGCCGAGCTGACGGTCGAGGAGCGAAACCTCCTCTCAGTGGCCT
ACAAGAACGTAATCGGCTCACTCCGCGCCGCGTGGCGCATCGTGTCGTCG
ATCGAGCAGAAGGAGGAGGGGAGGAAGAACGAGGAACACGTGTCGCTCGT
GAAAGAGTACAGATCGAAGGTGGAGAAGGAGCTTTCGGATGTGTGCGCGA
GTATTTTGAGGTTGTTGGAAGCGAATTTGATTCCGTCGGCTACGGCGAGT
GAGTCCAAAGTGTTTTATTTGAAAATGAAGGGAGATTATCATCGTTACAT
GGCCGAGTTTAAGATTGGCGATGAGCGGAAAGCCGCCGCTGAAGACACTA
TGCAATCTTACAAAGCTGCTCAGGATATTGCTGGGGCTGATCTCGCGCCG
ACGCATCCGATAAGGCTGGGATTGGCTCTCAAT
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