FC869186

Overview
NameFC869186
Unique NameFC869186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9472 contig Ccv1_Contig9472:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: ABHDD_DANRE (Abhydrolase domain-containing protein 13 OS=Danio rerio GN=abhd13 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.170e-36
Identity = 81/188 (43.09%), Postives = 123/188 (65.43%), Query Frame = 2
Query:   44 GIVMAGMA-LLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFIKLFPD--CRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 598
            G+++A +A +L  FQ+ L+Y P  P  ++ Y   P+ +   +E+V++R+ DG+RL+   ++   +     PTIL+F  NAGNI HR+    +ML  L  NV ++ YRGYG+S+G PS+ G+ +DA+A L+++  R DID T++V+FGRSLGGAV   L   NP +VAA+++ENTF SI  MA  L  F
Sbjct:   47 GLILASLAGILYKFQDVLLYFPDQPSSSRLYVPMPTGIP--HENVYIRTKDGIRLNLILLRYTGENPAGAPTILYFHGNAGNIGHRVPNALLMLVNLKANVVLVDYRGYGKSEGDPSEDGLYQDAEATLDYVMTRPDIDKTKVVLFGRSLGGAVAIRLASCNPHRVAAIMVENTFLSIPHMAATLFSF 232          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: BEM46_SCHPO (Protein bem46 OS=Schizosaccharomyces pombe GN=bem46 PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 9.908e-36
Identity = 78/186 (41.94%), Postives = 115/186 (61.83%), Query Frame = 2
Query:   47 IVMAGMALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFI--KLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 598
            + +  +  L  +Q+ LVY    P  ++    TP    + YE + LR+ D V L ++ +     P+ R PT+L+F  NAGN+ HRL + R+    L+ NVF++SYRGYG+S G PS+ G+  D+Q ALE+L +      T+IVV+G+S+GGAV   LT  N D+++ALILENTFTSI DM   + P+
Sbjct:   23 VTLIALGFLYKYQKTLVYPSAFPQGSRENVPTPKEFNMEYERIELRTRDKVTLDSYLMLQSESPESR-PTLLYFHANAGNMGHRLPIARVFYSALNMNVFIISYRGYGKSTGSPSEAGLKIDSQTALEYLMEHPICSKTKIVVYGQSIGGAVAIALTAKNQDRISALILENTFTSIKDMIPTVFPY 207          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: ABHDD_XENLA (Abhydrolase domain-containing protein 13 OS=Xenopus laevis GN=abhd13 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.582e-33
Identity = 74/180 (41.11%), Postives = 112/180 (62.22%), Query Frame = 2
Query:   68 LLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFIKLFPDCRG--PTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFL 601
            +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++++ D +RL+   ++   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+SDG PS+ G+  D++A L+++  R DID T+I++FGRSLGGAV   L   N  ++ AL+LENTF SI  MA  L   L
Sbjct:   56 ILFKFQDVLLYFPDQPSSSRLYIPMPTGIP--HENIFIKTKDNIRLNLILLRYTGDNSSFSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLILVDYRGYGKSDGEPSEEGLYMDSEAVLDYVMTRPDIDKTKIILFGRSLGGAVAIHLASENAHRICALVLENTFLSIPHMASTLFSVL 233          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: ABHDD_HUMAN (Abhydrolase domain-containing protein 13 OS=Homo sapiens GN=ABHD13 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.749e-32
Identity = 75/194 (38.66%), Postives = 118/194 (60.82%), Query Frame = 2
Query:   41 GGIVMAGM------ALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFIKLFPDCR--GPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 598
            GGI++  +       +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++R+ DG+RL+   I+   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F
Sbjct:   41 GGIILLLLIFISIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIP--HENIFIRTKDGIRLNLILIRYTGDNSPYSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLLLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSF 232          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: ABHDD_MOUSE (Abhydrolase domain-containing protein 13 OS=Mus musculus GN=Abhd13 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.983e-32
Identity = 75/194 (38.66%), Postives = 118/194 (60.82%), Query Frame = 2
Query:   41 GGIVMAGM------ALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFIKLFPDCRG--PTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 598
            GGIV+  +       +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++R+ DGVRL+   ++   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R D+D T++ +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F
Sbjct:   41 GGIVLLLLIFVSIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIP--HENIFIRTKDGVRLNLILVRYTGDNSPYCPTIIYFHGNAGNIGHRLPNALLMLVNLRVNLVLVDYRGYGKSEGEASEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSF 232          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: ABHDD_CHICK (Abhydrolase domain-containing protein 13 OS=Gallus gallus GN=ABHD13 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.134e-31
Identity = 73/194 (37.63%), Postives = 118/194 (60.82%), Query Frame = 2
Query:   41 GGIVMAGM------ALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFIKLFPD--CRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPF 598
            GGI++  +       +L  FQ+ L+Y P  P  ++ Y   P+ +   +E++++++ DGV L+   ++   D     PTI++F  NAGNI HRL    +ML  L  N+ ++ YRGYG+S+G  S+ G+  D++A L+++  R+D+D T+I +FGRSLGGAV   L   N  +++A+++ENTF SI  MA  L  F
Sbjct:   41 GGIILLLLIFVSIAGILYKFQDMLLYFPEQPSSSRLYVPMPTGIP--HENIFIKTKDGVLLNLILLRYTGDNAAYSPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLILVDYRGYGKSEGEASEEGLYIDSEAVLDYVMTRSDLDKTKIFLFGRSLGGAVAIHLASENSHRISAIMVENTFLSIPHMASTLFSF 232          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: YN60_YEAST (Uncharacterized membrane protein YNL320W OS=Saccharomyces cerevisiae GN=YNL320W PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.484e-23
Identity = 67/194 (34.54%), Postives = 103/194 (53.09%), Query Frame = 2
Query:   29 LYGVGGIVMAGMALLVAFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFLKWF 610
            L G+  +    +A L  +Q +LVY     G  +++  TP    + YE + L + D ++L AW IK   +    T+L    NAGNI + + ++ I  ++   +VF+ SYRGYG S+G PS+ G+  DA   + HLS  +     ++V++GRSLGGA    +     D    +ILENTF SI  +   + P LK F
Sbjct:   10 LGGLVALTTISVATLYHYQNRLVYPSWAQG-ARNHVDTPDSRGIPYEKLTLITQDHIKLEAWDIK--NENSTSTVLILCPNAGNIGYFILIIDIFYRQFGMSVFIYSYRGYGNSEGSPSEKGLKLDADCVISHLSTDSFHSKRKLVLYGRSLGGANALYIASKFRDLCDGVILENTFLSIRKVIPYIFPLLKRF 200          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: Y2307_MYCTU (Uncharacterized protein Rv2307c/MT2364 OS=Mycobacterium tuberculosis GN=Rv2307c PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.365e-23
Identity = 65/186 (34.95%), Postives = 101/186 (54.30%), Query Frame = 2
Query:   47 IVMAGMALLV-AFQEKLVYVPVLPGLTKSYSITPSRLRLIYEDVWLRSSDGVRLHAWFIKLFPDCRGPTILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGAVGAVLTKNNPDKVAALILENTFTSILDMAGVLLPFL 601
            +V +G+ + + + Q +L+Y P    +  + S+ P+       DV + + DG+RL  W+        GP +L    NAG+ + R E+  + L  L  +V +  YRGYG + G PS+ G+  DA+AA E LS ++D+D  RI  FG SLG AV   L    P   AAL+L + FTS+ ++  V  P+L
Sbjct:   17 LVASGVIMFIWSQQRRLIYFPSAGPVPSASSVLPAG-----RDVVVETQDGMRLGGWYFPHTSGGSGPAVLVCNGNAGDRSMRAELA-VALHGLGLSVLLFDYRGYGGNPGRPSEQGLAADARAAQEWLSGQSDVDPARIAYFGESLGAAVAVGLAVQRPP--AALVLRSPFTSLAEVGAVHYPWL 194          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: YHFR_ECO57 (Uncharacterized protein yfhR OS=Escherichia coli O157:H7 GN=yhfR PE=3 SV=4)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 57/150 (38.00%), Postives = 90/150 (60.00%), Query Frame = 2
Query:  167 EDVWLRSSDGVRLHAWFIKLFPDCRGP------TILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGA-VGAVLTKNNPDKVAALILENTFTSILDMAGVLLP 595
            E V   + DG RL  WFI   P   GP      TI+    NAGN++    +V  + +R + NVFM  YRG+G+S G PSQ G+  D Q+A+  +  R+D++  R+V+FG+S+GGA + AV+ + + + + A+IL++TF S   +A  ++P
Sbjct:   50 ESVEFTAKDGTRLQGWFI---PSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPER-NFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILAVIGQGDREGIRAVILDSTFASYATIANQMIP 195          
BLAST of FC869186 vs. ExPASy Swiss-Prot
Match: YFHR_ECOLI (Uncharacterized protein yfhR OS=Escherichia coli (strain K12) GN=yfhR PE=3 SV=4)

HSP 1 Score: 97.0561 bits (240), Expect = 9.954e-20
Identity = 56/150 (37.33%), Postives = 89/150 (59.33%), Query Frame = 2
Query:  167 EDVWLRSSDGVRLHAWFIKLFPDCRGP------TILFFQENAGNIAHRLEMVRIMLQRLHCNVFMLSYRGYGESDGYPSQHGITRDAQAALEHLSQRTDIDTTRIVVFGRSLGGA-VGAVLTKNNPDKVAALILENTFTSILDMAGVLLP 595
            E V   + DG RL  WFI   P   GP      TI+    NAGN++    +V  + +R + NVFM  YRG+G+S G PSQ G+  D Q+A+  +  R+D++  R+V+FG+S+GGA +  V+ + + + + A+IL++TF S   +A  ++P
Sbjct:   50 ESVEFTAKDGTRLQGWFI---PSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLPER-NFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGANILDVIGRGDREGIRAVILDSTFASYATIANQMIP 195          
The following BLAST results are available for this feature:
BLAST of FC869186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ABHDD_DANRE1.170e-3643.09Abhydrolase domain-containing protein 13 OS=Danio ... [more]
BEM46_SCHPO9.908e-3641.94Protein bem46 OS=Schizosaccharomyces pombe GN=bem4... [more]
ABHDD_XENLA1.582e-3341.11Abhydrolase domain-containing protein 13 OS=Xenopu... [more]
ABHDD_HUMAN1.749e-3238.66Abhydrolase domain-containing protein 13 OS=Homo s... [more]
ABHDD_MOUSE2.983e-3238.66Abhydrolase domain-containing protein 13 OS=Mus mu... [more]
ABHDD_CHICK1.134e-3137.63Abhydrolase domain-containing protein 13 OS=Gallus... [more]
YN60_YEAST1.484e-2334.54Uncharacterized membrane protein YNL320W OS=Saccha... [more]
Y2307_MYCTU7.365e-2334.95Uncharacterized protein Rv2307c/MT2364 OS=Mycobact... [more]
YHFR_ECO572.620e-2038.00Uncharacterized protein yfhR OS=Escherichia coli O... [more]
YFHR_ECOLI9.954e-2037.33Uncharacterized protein yfhR OS=Escherichia coli (... [more]

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Properties
Property NameValue
Genbank descriptionC31009D12EF AbioticL1 Citrus clementina cDNA clone C31009D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869186 ID=FC869186; Name=FC869186; organism=Citrus clementina; type=EST; length=702bp
CAGCATGGTGTCGTTCCTGAATGCATTGTTGTACGGAGTGGGTGGCATAG
TGATGGCCGGGATGGCACTGTTGGTGGCTTTCCAAGAGAAGCTTGTTTAC
GTTCCGGTTCTGCCGGGTCTGACCAAATCCTACTCGATTACCCCGTCCCG
GCTCCGGCTTATTTACGAGGATGTCTGGCTCCGATCCTCTGATGGCGTTC
GTCTCCACGCCTGGTTCATCAAGCTTTTTCCCGATTGCCGAGGTCCAACC
ATTTTGTTTTTTCAAGAAAATGCTGGCAATATTGCACACCGTCTTGAAAT
GGTTCGCATAATGTTACAAAGGTTGCACTGCAATGTATTCATGCTTTCAT
ATCGTGGTTATGGAGAAAGTGATGGCTATCCTTCTCAGCATGGAATTACA
AGGGATGCTCAGGCAGCATTGGAGCATCTTTCTCAAAGGACCGATATAGA
CACGACTAGAATAGTTGTATTTGGGAGATCACTAGGAGGTGCCGTTGGAG
CTGTGCTTACTAAGAATAATCCGGATAAGGTCGCTGCACTGATACTGGAG
AATACTTTCACATCAATACTGGACATGGCTGGAGTTCTTCTGCCATTCCT
GAAGTGGTTTATTGGGGGCAGTGGTTCAAAAGGTCCAAGAATTCTTAATT
TTCTTGTACGCTCTCCTTGGGAGTACATTGATGTTGTTGGTGAGATGAGA
TG
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