FC869189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869189 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.238e-85 Identity = 128/134 (95.52%), Postives = 132/134 (98.51%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 404 YAIAFQER++IPDEKM YYE+LAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E Sbjct: 229 YAIAFQERIRIPDEKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE 362 HSP 2 Score: 68.1662 bits (165), Expect = 1.238e-85 Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 1 Query: 400 LKGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 507 ++GS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDV Sbjct: 361 VEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDV 396
BLAST of FC869189 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 1.039e-81 Identity = 122/134 (91.04%), Postives = 125/134 (93.28%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIE 404 YAIAFQER+KI D+KM YYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQLATR RA KI GGKIIRVEAHPIPEHPRPRRL RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+E Sbjct: 226 YAIAFQERIKISDDKMKYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKADIKKFQLATRLRADSKITGGKIIRVEAHPIPEHPRPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVE 359 HSP 2 Score: 70.4774 bits (171), Expect = 1.039e-81 Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 1 Query: 400 LKGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 507 ++GSE G RM+DE DLRKYLEKWDKTYWPTYKVLD+ Sbjct: 358 VEGSEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDI 393
BLAST of FC869189 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 3.287e-77 Identity = 119/133 (89.47%), Postives = 125/133 (93.98%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 401 YAIAFQERVKIPD+KM YYE AEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHK DIKKFQ ATR RAKD+I GGKIIRVEAHPIPEHPRP+R++GRV LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+ Sbjct: 225 YAIAFQERVKIPDDKMKYYEERAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKPDIKKFQAATRLRAKDRIEGGKIIRVEAHPIPEHPRPKRVAGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIV 357 HSP 2 Score: 59.3066 bits (142), Expect = 3.287e-77 Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 1 Query: 406 GSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 507 GS NGTRM++E DLR+YL ++D+ YWPTYKVLDV Sbjct: 359 GSANGTRMVEESDLRRYLAEFDRLYWPTYKVLDV 392
BLAST of FC869189 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.565e-58 Identity = 99/134 (73.88%), Postives = 112/134 (83.58%), Query Frame = 3 Query: 3 YAIAFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTV-THKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAII 401 YAIAFQER+++P++KM YY+ LAEMYVGDDVSPDFY WVFPK DHVAVGTGT+ +K IK Q R RA K+ GG+II+VEAHPIPEHPRPRR+ GRVALVGDAAG VTK SGEGIYFAAKS RMCAE I+ Sbjct: 175 YAIAFQERIRLPEDKMAYYDELAEMYVGDDVSPDFYAWVFPKYDHVAVGTGTMKVNKARIKDLQAGIRTRAAKKLEGGEIIKVEAHPIPEHPRPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSARMCAETIV 308 HSP 2 Score: 42.3578 bits (98), Expect = 1.565e-58 Identity = 17/33 (51.52%), Postives = 24/33 (72.73%), Query Frame = 1 Query: 409 SENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDV 507 S NG R+ E DL++Y+++WDK Y TY VLD+ Sbjct: 311 SNNGQRVPTEADLKQYIKQWDKRYGATYLVLDI 343
BLAST of FC869189 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.190e-14 Identity = 50/129 (38.76%), Postives = 63/129 (48.84%), Query Frame = 3 Query: 12 AFQERVKIPDEKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRNRAKDKILGGKIIRVEAHPIPEHPRPRRLSGR-VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEA 395 A+ E +K P Y ++Y +SPDFYGWVFP ++G G T D+ T R + + IR E PIP P +G+ V L GDAAG V SGEGIY+A GR AEA Sbjct: 167 AYHEIIKAPTTVANYDPTRCDVYYDGRISPDFYGWVFPHGKTASIGMG--TELPDVSLKDCTTLLRQMSGLDKEETIRKEGAPIPLQPLDVWDNGKDVVLSGDAAGVVAPSSGEGIYYAHAGGRYAAEA 293 The following BLAST results are available for this feature:
BLAST of FC869189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869189 ID=FC869189; Name=FC869189; organism=Citrus clementina; type=EST; length=508bpback to top |